Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,820,413 T→C intergenic (+38513/+14971) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,820,4130TC100.0% 186.8 / NA 62intergenic (+38513/+14971)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/24);  total (38/24)

TCCGAATTTGATCTAACTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAATGACGAAAAAGCCTTGCTCCCAATTCGACATCAATACGACTTGTACTATGAGCAAAAACATAGGTTCTCAAGCCTCCCAAGATTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATTACATTCAATGTTGAAAATCCACGGTGAACCAGGACTTTATCCATCACGACTTGAAAAAAGAGTGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACGGCAGGAATAAACCAGGTAAAGTCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGATGCAATTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGAATTAG  >  1/1820169‑1820655
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
tCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAGTAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATcc                                                                                                                                                                                                                                              <  1:596756/251‑1 (MQ=255)
 ccGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCa                                                                                                                                                                                                                                             <  1:250833/251‑1 (MQ=255)
         gATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGACTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGa                                                                                                                                                                                                                                       >  1:619256/1‑249 (MQ=255)
          aTCTAATTCACGAACACGAGCCATCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCTAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACtt                                                                                                                                                                                                                                    >  1:709014/1‑251 (MQ=255)
                          cGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGgtgt                                                                                                                                                                                                                    <  1:836711/251‑1 (MQ=255)
                           gAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATcc                                                                                                                                                                                                                                              <  1:84237/224‑1 (MQ=255)
                           gAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAag                                                                                                                                                                                                                            >  1:205949/1‑242 (MQ=255)
                              ccACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAAt                                                                                                                                                                                                                 >  1:56748/1‑250 (MQ=255)
                              ccACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                <  1:67996/251‑1 (MQ=255)
                              ccACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                <  1:555804/251‑1 (MQ=255)
                              ccACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                <  1:490094/251‑1 (MQ=255)
                                 ccGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGt                                                                                                                                                                                                             >  1:609030/1‑251 (MQ=255)
                                     aTCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                <  1:373170/244‑1 (MQ=255)
                                        cccAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCaaaaa                                                                                                                                                                                                      <  1:391527/251‑1 (MQ=255)
                                           aaCCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                <  1:375627/238‑1 (MQ=255)
                                                                             gCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATc                                                                                                                                                                                                                                               <  1:529010/173‑1 (MQ=255)
                                                                             gCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGaaa                                                                                                                                                                                    <  1:301673/232‑1 (MQ=255)
                                                                             gCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATaaa                                                                                                                                                                 >  1:440328/1‑251 (MQ=255)
                                                                                           aaaaaGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTAtt                                                                                                                                                   >  1:180737/1‑251 (MQ=255)
                                                                                                gtcTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATcc                                                                                                                                                                                                                                              <  1:521551/153‑1 (MQ=255)
                                                                                                          cagttCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAg                                                                                                                                                                                       <  1:115039/197‑1 (MQ=255)
                                                                                                                  cATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                >  1:356743/1‑167 (MQ=255)
                                                                                                                  cATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGt                                                                                                                                                                          >  1:491926/1‑205 (MQ=255)
                                                                                                                     cAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACGACAATAGCAAGAGTCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTa                                                                                                                         <  1:455203/251‑1 (MQ=255)
                                                                                                                      aaTACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                >  1:108699/1‑163 (MQ=255)
                                                                                                                           gACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCAc                                                                                                                                                                                                                                         <  1:470233/133‑1 (MQ=255)
                                                                                                                                gtgcTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                >  1:849596/4‑153 (MQ=255)
                                                                                                                                 tgcTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAAttt                                                                                                              <  1:378813/248‑1 (MQ=255)
                                                                                                                                        aGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAAcc                                                                                                                              <  1:179879/227‑1 (MQ=255)
                                                                                                                                             acaCATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTc                                                                                                   >  1:95941/3‑249 (MQ=255)
                                                                                                                                              caCATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATc                                                                                                                                                                                                                                               >  1:885244/2‑108 (MQ=255)
                                                                                                                                              caCATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTa                                                                                                >  1:83531/2‑251 (MQ=255)
                                                                                                                                                cATAGGTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAAttt                                                                                                              >  1:703163/1‑235 (MQ=255)
                                                                                                                                                    ggTTCTCAGCCCCCCCAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGAGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAg                                                                                          >  1:401112/1‑251 (MQ=255)
                                                                                                                                                     gttctcagcccccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGaaa                                                                                                                                                                                    <  1:758222/148‑1 (MQ=255)
                                                                                                                                                     gttctcagcccccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAAt                                                                                            >  1:300907/13‑248 (MQ=255)
                                                                                                                                                     gttctcagcccccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGa                                                                                         >  1:527488/13‑251 (MQ=255)
                                                                                                                                                                ccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCGATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGacg                                                                              >  1:62356/2‑249 (MQ=255)
                                                                                                                                                                ccccAAGACTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGacg                                                                              >  1:63219/2‑249 (MQ=255)
                                                                                                                                                                                    aGACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCtt                                                          >  1:132698/1‑251 (MQ=255)
                                                                                                                                                                                     gACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCttt                                                         >  1:227416/1‑251 (MQ=255)
                                                                                                                                                                                     gACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCttt                                                         >  1:560011/1‑251 (MQ=255)
                                                                                                                                                                                     gACTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGCGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTAc                                                                                               >  1:764145/1‑213 (MQ=255)
                                                                                                                                                                                       cTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGaaa                                                                                                                                                                                    >  1:284510/1‑126 (MQ=255)
                                                                                                                                                                                       cTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATc                                                                   >  1:829824/1‑239 (MQ=255)
                                                                                                                                                                                       cTACAATAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGa                                                       >  1:349983/1‑251 (MQ=255)
                                                                                                                                                                                             tAGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAAt                                                                                            >  1:876964/1‑208 (MQ=255)
                                                                                                                                                                                              aGCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAAt                                                                                                                                                                                                     >  1:198157/1‑102 (MQ=255)
                                                                                                                                                                                               gCAAGAGCCACTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGtt                                                >  1:98813/1‑250 (MQ=255)
                                                                                                                                                                                                       cACTGTAATCACGTTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTactc                                                                                                                                                                                                                <  1:785753/82‑4 (MQ=255)
                                                                                                                                                                                                         cTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATcc                                                                                                                                                                                                                                              >  1:96277/1‑50 (MQ=255)
                                                                                                                                                                                                         cTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAAcc                                                                                                                              <  1:483790/162‑1 (MQ=255)
                                                                                                                                                                                                         cTGTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCa                                     >  1:702999/1‑251 (MQ=255)
                                                                                                                                                                                                         aggTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCa                                     >  1:47721/3‑251 (MQ=255)
                                                                                                                                                                                                           gTAATCACATTCAATGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATc                                                                                                                                                                                                                <  1:484897/78‑1 (MQ=255)
                                                                                                                                                                                                                       aaTGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAAc                       <  1:724083/251‑1 (MQ=255)
                                                                                                                                                                                                                        aTGTTGAAAATCCACGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGc                                                                                                                                                         >  1:811098/1‑120 (MQ=255)
                                                                                                                                                                                                                                      cGGTGAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAAc                       >  1:598554/1‑236 (MQ=255)
                                                                                                                                                                                                                                          gAACCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCAtt    >  1:333185/1‑251 (MQ=255)
                                                                                                                                                                                                                                           aaCCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATg                                                                                       <  1:141377/167‑1 (MQ=255)
                                                                                                                                                                                                                                           aaCCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGt                                                 >  1:683780/1‑205 (MQ=255)
                                                                                                                                                                                                                                            aCCAAGACCTTATCCATCACGACTTGAAAAAAGAGCGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACAGCAGGAATAAACCAGGTAAAATCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGACGCAACTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGCATTAg  >  1:683547/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                  
TCCGAATTTGATCTAACTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAATGACGAAAAAGCCTTGCTCCCAATTCGACATCAATACGACTTGTACTATGAGCAAAAACATAGGTTCTCAAGCCTCCCAAGATTATTTCAAATAAGACTACAATAGCAAGAGCCACTGTAATTACATTCAATGTTGAAAATCCACGGTGAACCAGGACTTTATCCATCACGACTTGAAAAAAGAGTGGTGTAATCAGTGCAAAAATTTGCAAAAATATAGAAACGATTAACGTTTCTATAAAAATTTTGCGGTATTTAATTACGGCAGGAATAAACCAGGTAAAGTCGAATTTTGCTAAATTTCCTACAATAGATGCGCGTGATGCAATTAAAATCACCTTGCTTTGATAACGTTCTTCAAATTCATTTTTGTCTAAAACAATAGGATTTTTTTGAATTAG  >  1/1820169‑1820655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑