Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,820,101 T→A intergenic (+38201/+15283) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,820,1010TA100.0% 224.1 / NA 77intergenic (+38201/+15283)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (37/40);  total (37/40)

CAACATAACTCGCTAACTGTTTATCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATTACAGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAACTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAATGACGAAAAAGCCTTGCTCCCAATTCGACATCAATACGACTTGTACTATGAGCAAAAACATAGGTTCTCAAGCCTCCCAAGATTATTTCAA  >  1/1819863‑1820345
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                    
cAACATAACTCGCCAACTGTTTATCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGaaa                                                                                                                                                                                                                                          >  1:54537/1‑251 (MQ=255)
        cTCGCCAACTGTTTATCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATaaa                                                                                                                                                                                                                                     >  1:243717/1‑248 (MQ=255)
                 tGTTTATCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACaa                                                                                                                                                                                                                         <  1:882446/251‑1 (MQ=255)
                       tCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTaa                                                                                                                                                                                                                   >  1:164837/1‑251 (MQ=255)
                       tCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTaa                                                                                                                                                                                                                   >  1:158965/1‑251 (MQ=255)
                          cAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAAt                                                                                                                                                                                                                <  1:322987/251‑1 (MQ=255)
                          cAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAAt                                                                                                                                                                                                                <  1:118560/251‑1 (MQ=255)
                          cAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGAGTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAAt                                                                                                                                                                                                                <  1:427027/251‑1 (MQ=255)
                                ttAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAgg                                                                                                                                                                                                           <  1:895612/250‑1 (MQ=255)
                                ttAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGt                                                                                                                                                                                                          <  1:869536/251‑1 (MQ=255)
                                       tttGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGtgcc                                                                                                                                                                                                   <  1:52938/251‑1 (MQ=255)
                                             gagaAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGccc                                                                                                                                                                                              <  1:165638/250‑1 (MQ=255)
                                             gagaAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGccc                                                                                                                                                                                              <  1:493150/250‑1 (MQ=255)
                                                          cGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTAACATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGaaa                                                                                                                                                                                    >  1:595071/1‑247 (MQ=255)
                                                                    gTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAAc                                                                                                                                                                                                                           <  1:665668/198‑1 (MQ=255)
                                                                    gTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAAt                                                                                                                                                                                                                <  1:40974/209‑1 (MQ=255)
                                                                    gTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATag                                                                                                                                                                                                              <  1:147647/211‑1 (MQ=255)
                                                                                           aacaaGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCg                                                                                                                                               >  1:175926/1‑251 (MQ=255)
                                                                                              aaGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAACAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTAt                                                                                                                                            <  1:11470/251‑1 (MQ=255)
                                                                                               aGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATACCAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTaatt                                                                                                                                                                 >  1:451758/1‑227 (MQ=255)
                                                                                               aGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATag                                                                                                                                                                                                              >  1:533426/1‑184 (MQ=255)
                                                                                               aGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGtgcc                                                                                                                                                                                                   <  1:38312/195‑1 (MQ=255)
                                                                                               aGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTAt                                                                                                                                            >  1:872110/1‑250 (MQ=255)
                                                                                                 aaaaGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATcc                                                                                                                                          <  1:52198/250‑1 (MQ=255)
                                                                                                    aGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCaa                                                                                                                                      >  1:374923/1‑251 (MQ=255)
                                                                                                                  cATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGaaa                                                                                                                                                                                    <  1:175982/191‑1 (MQ=255)
                                                                                                                               cTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCTCATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAgg                                                                                                                                                                                                           <  1:191948/155‑1 (MQ=255)
                                                                                                                               cTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGaaa                                                                                                                                                                                    >  1:741643/1‑178 (MQ=255)
                                                                                                                                   tcatcaAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAGGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTaa                                                                                                       >  1:441786/1‑251 (MQ=255)
                                                                                                                                            cGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataa                                                                                              <  1:792446/251‑1 (MQ=255)
                                                                                                                                              tctcCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataagt                                                                                            >  1:210027/1‑249 (MQ=255)
                                                                                                                                              tctcCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             <  1:629861/250‑2 (MQ=255)
                                                                                                                                              tctcCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             <  1:704047/250‑2 (MQ=255)
                                                                                                                                               ctcCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataagtg                                                                                           >  1:506658/1‑248 (MQ=255)
                                                                                                                                                 ccTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             <  1:549000/247‑2 (MQ=255)
                                                                                                                                                      gAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAAt                                                                                                                                                                                                                >  1:311527/1‑127 (MQ=255)
                                                                                                                                                      gAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             >  1:60680/1‑241 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGccc                                                                                                                                                                                              >  1:750881/1‑135 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGaaa                                                                                                                                                                                    <  1:204861/145‑1 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATccc                                                                                                                                         >  1:736392/1‑188 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAAc                                                                                                                                     >  1:828595/1‑192 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAAt                                                                                                                    <  1:193101/209‑1 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCt                                                                           >  1:533878/1‑250 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCt                                                                           >  1:210169/1‑250 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCt                                                                           >  1:639711/1‑250 (MQ=255)
                                                                                                                                                                aataaAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTc                                                                          <  1:852227/251‑1 (MQ=255)
                                                                                                                                                                            ccAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACAt                                                              <  1:421804/251‑1 (MQ=255)
                                                                                                                                                                            ccAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACAt                                                              <  1:763013/251‑1 (MQ=255)
                                                                                                                                                                                   aCATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACg                                                       >  1:633345/1‑251 (MQ=255)
                                                                                                                                                                                            ggTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGtg                                                >  1:107874/1‑248 (MQ=255)
                                                                                                                                                                                             gTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCcgacg                                                                                                                               <  1:240322/169‑1 (MQ=255)
                                                                                                                                                                                             gTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             <  1:147114/203‑2 (MQ=255)
                                                                                                                                                                                             gTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGAc                                                                <  1:228556/232‑1 (MQ=255)
                                                                                                                                                                                             gTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTa                                             >  1:290539/1‑251 (MQ=255)
                                                                                                                                                                                             gTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTa                                             >  1:717705/1‑251 (MQ=255)
                                                                                                                                                                                             gTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTa                                             >  1:715704/1‑251 (MQ=255)
                                                                                                                                                                                                  gAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAg                                         >  1:416262/1‑250 (MQ=255)
                                                                                                                                                                                                         gTACAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             <  1:289540/191‑2 (MQ=255)
                                                                                                                                                                                                            cAACTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGtgct                                              <  1:501855/235‑4 (MQ=255)
                                                                                                                                                                                                             aaCTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAgg                             <  1:777333/251‑1 (MQ=255)
                                                                                                                                                                                                              aCTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaataag                                                                                             <  1:102076/186‑2 (MQ=255)
                                                                                                                                                                                                              aCTAATGTTAATTTTGGGCTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTATAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTGCGAATTTGATCTAATACACGAACACGAGCCACCGTATCCCCAAGCCGACGAGCTTCAAAATAAGAAATCGGTAAAACTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGt                            <  1:616305/251‑1 (MQ=255)
                                                                                                                                                                                                                                cTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGt                            >  1:719673/1‑233 (MQ=255)
                                                                                                                                                                                                                                cTGTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGac          <  1:761572/251‑2 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGt                                                                                                         >  1:119235/1‑154 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACAt                                <  1:133972/227‑1 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGacta        >  1:739869/1‑248 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGacta        >  1:406006/1‑248 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGacta        >  1:507986/1‑248 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGac          <  1:201054/249‑2 (MQ=255)
                                                                                                                                                                                                                                  gTAATACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGac          <  1:670742/249‑2 (MQ=255)
                                                                                                                                                                                                                                     aTACCACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTAttt     >  1:83799/1‑251 (MQ=255)
                                                                                                                                                                                                                                        ccACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAAt                                                                                                                    >  1:853109/1‑137 (MQ=255)
                                                                                                                                                                                                                                        ccACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCtaa                                                                                                 <  1:622541/156‑1 (MQ=255)
                                                                                                                                                                                                                                        ccACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCaa  >  1:61930/1‑251 (MQ=255)
                                                                                                                                                                                                                                        ccACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCaa  <  1:247381/251‑1 (MQ=255)
                                                                                                                                                                                                                                        ccACATAACGGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAATTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAGTGACGAAAAAGTCTTGCTCCCAGTTCGACATCAATACGACTTGTGCTATGAGCAAACACATAGGTTCTCAGCCCCCCCAAGACTATTTCaa  >  1:58880/1‑251 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                    
CAACATAACTCGCTAACTGTTTATCCCAAATGTTAGTCATTTGAGGAGAAATAGCCATCGCTTTAATTGTATTAATGGCAGTCACTGATTCAACAAGAAAAGACTGATTGTCGGCATTTCTTGCGAACTTATCATCAAGCCGTCTCCTAAGAATAGGACTAATAAAAACAGACCAAATGACATAACAAGGTAAAGAACCGAGTACAACTAATGTTAATTTTGGGCTGTAATACCACATTACAGCGAAGAAAATAAAAGAGAATAACAAGTCTAAAATAGAGGTAAGTGCCTGCCCTGTTAAGAAATTCCGAATTTGATCTAACTCACGAACACGAGCCACCGTATCCCCAACCCGACGAGCTTCAAAATAAGAAATCGGTAAAGCTAATAAATGACGAAAAAGCCTTGCTCCCAATTCGACATCAATACGACTTGTACTATGAGCAAAAACATAGGTTCTCAAGCCTCCCAAGATTATTTCAA  >  1/1819863‑1820345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑