Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,819,369 G→A intergenic (+37469/+16015) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,819,3690GA100.0% 233.5 / NA 80intergenic (+37469/+16015)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (40/40);  total (40/40)

GTCCTCCGGACAAACCGGCTCCCTGTTCCCCCACAACCGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCTCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGGCATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAAGACGACACCGACTTGCCGGCGCAACCAGTTTGGATCGGCTAGCGCCAAATCGTGACCGTCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATGAGTTTAGTAAGCGTACTTTTCCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATATTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGGATTTCCGGTAATGATACTGAGGCGGTATTATTCTCTGTAGGCG  >  1/1819128‑1819607
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                              
gTCCTCCGGACAGACCGGCTCCCTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAg                                                                                                                                                                                                                                       >  1:679483/1‑251 (MQ=255)
  cctccGGACAGACCGGCTCCCTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGa                                                                                                                                                                                                                                      >  1:548547/1‑250 (MQ=255)
  cctccGGACAGACCGGCTCCCTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGa                                                                                                                                                                                                                                      >  1:480375/1‑250 (MQ=255)
  cctccGGACAGACCGGCTCCCTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGAc                                                                                                                                                                                                                                     <  1:234371/251‑1 (MQ=255)
            gaCCGGCTCCCTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGAc                                                                                                                                                                                                                                     >  1:375659/2‑241 (MQ=255)
                   tCCCTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGaa                                                                                                                                                                                                                    <  1:835748/251‑1 (MQ=255)
                      cTGTTCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAatat                                                                                                                                                                                                                 <  1:712496/251‑1 (MQ=255)
                           cccccACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATaaaaa                                                                                                                                                                                                            <  1:654123/251‑1 (MQ=255)
                                   acagtgtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGAt                                                                                                                                                                                                    >  1:115730/4‑251 (MQ=255)
                                   acagtgtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGAt                                                                                                                                                                                                    >  1:61340/4‑251 (MQ=255)
                                      gtgtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGAc                                                                                                                                                                                                                                     >  1:99340/1‑215 (MQ=255)
                                      gtgtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGAc                                                                                                                                                                                                                                     >  1:140104/1‑215 (MQ=255)
                                      gtgtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTc                                                                                                                                                                                                                         >  1:884549/1‑227 (MQ=255)
                                       tgtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGt                                                                                                                                                                                                >  1:317725/1‑251 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCTGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGCATATAAAAACGTTGGATAAGtt                                                                                                                                                                                               >  1:218832/1‑251 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGAc                                                                                                                                                                                                                                     <  1:226283/213‑1 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGcccc                                                                                                                                                                                                                              <  1:711476/220‑1 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGccc                                                                                                                                                                                                                               >  1:868236/1‑219 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGcc                                                                                                                                                                                                                                <  1:358141/218‑1 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGtt                                                                                                                                                                                               >  1:264155/1‑251 (MQ=255)
                                        gtTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCACAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGtt                                                                                                                                                                                               >  1:163117/1‑251 (MQ=255)
                                                  tctcTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGt                                                                                                                                                                                     >  1:297873/1‑251 (MQ=255)
                                                                      aTCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAAc                                                                                                                                                                 <  1:764428/251‑1 (MQ=255)
                                                                                  cGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATAc                                                                                                                                                     <  1:15789/251‑1 (MQ=255)
                                                                                  cGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATAc                                                                                                                                                     <  1:761872/251‑1 (MQ=255)
                                                                                       gTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAAt                                                                                                                                                 >  1:280175/1‑250 (MQ=255)
                                                                                                cgGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTccc                                                                                                                                       <  1:892541/251‑1 (MQ=255)
                                                                                                  gCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTaa                                                                                                                                                                                         <  1:713443/199‑1 (MQ=255)
                                                                                                  gCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTcc                                                                                                                                        >  1:284966/1‑248 (MQ=255)
                                                                                                    aaTAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCctgac                                                                                                                                   <  1:489981/251‑1 (MQ=255)
                                                                                                        aCCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATAc                                                                                                                                                     >  1:87954/1‑229 (MQ=255)
                                                                                                              tCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAAc                                                                                                                                                                                                           <  1:532883/169‑1 (MQ=255)
                                                                                                                cATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCctgac                                                                                                                                   <  1:776606/239‑1 (MQ=255)
                                                                                                                 aTTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGtt                                                                                                                      <  1:785387/251‑1 (MQ=255)
                                                                                                                      cATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAatac                                                                                                                 <  1:174856/251‑2 (MQ=255)
                                                                                                                         tCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACcaaca                                                                                                                                                         <  1:682032/208‑1 (MQ=255)
                                                                                                                             ggATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTaa                                                                                                          >  1:573076/1‑251 (MQ=255)
                                                                                                                                       aCGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAatac                                                                                                                 <  1:460415/234‑2 (MQ=255)
                                                                                                                                       aCGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAggg                                                                                                >  1:146314/1‑251 (MQ=255)
                                                                                                                                        cGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTa                                                                                                                                                                                          <  1:606997/160‑1 (MQ=255)
                                                                                                                                        cGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAgggg                                                                                               <  1:380542/251‑1 (MQ=255)
                                                                                                                                               ttCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCgg                                                                                        <  1:244782/251‑1 (MQ=255)
                                                                                                                                               ttCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCgg                                                                                        <  1:111098/251‑1 (MQ=255)
                                                                                                                                                tctctcTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACttt                                                                                                                                                                                <  1:163347/162‑1 (MQ=255)
                                                                                                                                                   ctctGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGaa                                                                                                                                                                                                                    >  1:691559/1‑123 (MQ=255)
                                                                                                                                                   ctctGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTa                                                                                                                                                                                          <  1:533600/149‑1 (MQ=255)
                                                                                                                                                   ctctGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTta                                                                                    >  1:198995/1‑251 (MQ=255)
                                                                                                                                                                   aaGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCa                                                                                                                                                   >  1:734794/1‑172 (MQ=255)
                                                                                                                                                                        acacATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGaa                                                                                                                                                                                                                    >  1:713583/1‑102 (MQ=255)
                                                                                                                                                                        acacATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAAc                                                                                                                                                                 >  1:33385/1‑153 (MQ=255)
                                                                                                                                                                        acacATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTa                                                               >  1:129552/1‑251 (MQ=255)
                                                                                                                                                                         cacaTTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAAt                                                                                                                                                       >  1:249387/1‑162 (MQ=255)
                                                                                                                                                                             ttATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTaaaa                                                            >  1:414736/1‑249 (MQ=255)
                                                                                                                                                                               aTCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATAcc                                                                                                                                                    <  1:493244/159‑1 (MQ=255)
                                                                                                                                                                               aTCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGatat                                                                                                                             <  1:775951/182‑1 (MQ=255)
                                                                                                                                                                               aTCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTaa                                                        >  1:814257/1‑251 (MQ=255)
                                                                                                                                                                                       ggacgacACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTa                                                                                                                                                                                          <  1:629686/112‑1 (MQ=255)
                                                                                                                                                                                       ggacgacACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCAcc                                                 >  1:647313/2‑250 (MQ=255)
                                                                                                                                                                                         acgacACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAgggg                                                                                               >  1:183568/1‑202 (MQ=255)
                                                                                                                                                                                               cctaCTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTcc                                                                                                                                        <  1:566233/152‑1 (MQ=255)
                                                                                                                                                                                                           cgtaaCCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGAt                              >  1:756227/4‑249 (MQ=255)
                                                                                                                                                                                                             taaCCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTg                          <  1:387956/250‑1 (MQ=255)
                                                                                                                                                                                                              aaCCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAAtctc                                                    <  1:745239/224‑1 (MQ=255)
                                                                                                                                                                                                              aaCCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGa                         >  1:636046/1‑251 (MQ=255)
                                                                                                                                                                                                                  aGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCg                     >  1:735619/1‑251 (MQ=255)
                                                                                                                                                                                                                   gTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCctgac                                                                                                                                   >  1:103689/1‑140 (MQ=255)
                                                                                                                                                                                                                   gTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCgg                    >  1:684688/1‑251 (MQ=255)
                                                                                                                                                                                                                   gTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCgg                    >  1:540391/1‑251 (MQ=255)
                                                                                                                                                                                                                         aTCGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGtattat              <  1:560237/251‑1 (MQ=255)
                                                                                                                                                                                                                           cGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATtc            <  1:61694/251‑1 (MQ=255)
                                                                                                                                                                                                                           cGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATtc            <  1:534675/251‑1 (MQ=255)
                                                                                                                                                                                                                           cGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATtc            <  1:247570/251‑1 (MQ=255)
                                                                                                                                                                                                                           cGGCTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATACCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATtc            <  1:823413/251‑1 (MQ=255)
                                                                                                                                                                                                                           cGGCTAGTGCCAAAGCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATtc            <  1:894239/251‑1 (MQ=255)
                                                                                                                                                                                                                              cTAGTGCCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATtctc          <  1:367573/250‑1 (MQ=255)
                                                                                                                                                                                                                                 gtgcCAAATCGTGACCATCAATTAAGACTTGCCCCTGATCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATTCTCTGTa      >  1:694445/3‑251 (MQ=255)
                                                                                                                                                                                                                                   gcCAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATTCTCTGTAgg    >  1:86697/1‑251 (MQ=255)
                                                                                                                                                                                                                                    ccAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATTCTCTGTAgg    <  1:562328/250‑1 (MQ=255)
                                                                                                                                                                                                                                     cAAATCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGAATTTCCGGTAATGATACTGAGGCGGTATTATTCTCTGTAGGCg  <  1:545294/251‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCGTGACCATCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATAAGTTTAGTAAGCGTACTTTTTCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATACTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAat                                                                      >  1:520585/1‑180 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                              
GTCCTCCGGACAAACCGGCTCCCTGTTCCCCCACAACCGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCTCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGGCATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAAGACGACACCGACTTGCCGGCGCAACCAGTTTGGATCGGCTAGCGCCAAATCGTGACCGTCAATTAAGACTTGCCCCTGCTCCGGAATATAAAAACGTTGGATGAGTTTAGTAAGCGTACTTTTCCCCGAACCTGAACGACCAACAATACCAATCACTTCTCCCTGACTGATATCTAAGTTAATATTGTTTAAAATCATAGGGGAATCCGGTTTATAGCGGAACTTAATATTTCTAAAACTAATCTCACCCTGGATTTCCGGTAATGATACTGAGGCGGTATTATTCTCTGTAGGCG  >  1/1819128‑1819607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑