Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,819,140 A→G intergenic (+37240/+16244) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,819,1400AG100.0% 194.1 / NA 68intergenic (+37240/+16244)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (34/34);  total (34/34)

TGCTTGCCTTGTTCGATGATTTCACCTTTGTCCATCACAATAATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACAGTACGATTTTGGCAAATTTTATGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCTTGGGTTATTGACTAGTGCCCTTGCTATCGCGATCCGTTGACGTTGTCCTCCGGACAAACCGGCTCCCTGTT‑CCCCCACAACCGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCTCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGGCATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAAGACGACACCGACTTGCCGGCGCAACCAGTTTGGATCGGCTAGCGCCAAATCGTGACCGTCAATTAAGAC  >  1/1818896‑1819380
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                 
tGCTTGCCTTGTTCGATGATTTCACCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCgg                                                                                                                                                                                                                                              >  1:449218/1‑250 (MQ=255)
       cTTGTTCGATGATTTCACCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGt                                                                                                                                                                                                                                      <  1:103443/251‑1 (MQ=255)
         tGTTCGATGATTTCACCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑c                                                                                                                                                                                                                                   <  1:245272/251‑1 (MQ=255)
                 gatTTCACCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACaa                                                                                                                                                                                                                           >  1:275982/1‑251 (MQ=255)
                   tttCACCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAAca                                                                                                                                                                                                                         >  1:412044/1‑250 (MQ=255)
                    ttCACCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAAcag                                                                                                                                                                                                                        <  1:484118/251‑3 (MQ=255)
                       aCCTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAgtgt                                                                                                                                                                                                                     <  1:590432/251‑1 (MQ=255)
                         cTTTGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTta                                                                                                                                                                                                                   <  1:300699/251‑1 (MQ=255)
                          tttGTCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTtat                                                                                                                                                                                                                  <  1:14757/251‑1 (MQ=255)
                              tCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAcc                                                                                                                                                                                                              <  1:810527/251‑1 (MQ=255)
                              tCCATCACAATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAc                                                                                                                                                                                                               <  1:189648/250‑1 (MQ=255)
                                    acaATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAAc                                                                                                                                                                                                                          <  1:285579/233‑1 (MQ=255)
                                    acaATGATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAcc                                                                                                                                                                                                              <  1:98481/245‑1 (MQ=255)
                                       atgatGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAc                                                                                                                                                                                                               >  1:43073/4‑241 (MQ=255)
                                       atgatGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTaa                                                                                                                                                                                                     >  1:444671/4‑251 (MQ=255)
                                        tgatGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAAt                                                                                                                                                                                                    <  1:179954/249‑1 (MQ=255)
                                             cGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAg                                                                                                                                                                                                <  1:727956/250‑1 (MQ=255)
                                                     aTTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAAt                                                                                                                                                                                                    >  1:34838/1‑238 (MQ=255)
                                                             cAGTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTgcgcg                                                                                                                                                                               >  1:122206/1‑250 (MQ=255)
                                                               gTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTc                                                                                                                                                                                                                                           <  1:97355/190‑1 (MQ=255)
                                                               gTAGAAAGGCGGTGAGCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAcc                                                                                                                                                                                                              >  1:247416/1‑218 (MQ=255)
                                                                              gCAATGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAgtgt                                                                                                                                                                                                                     >  1:259418/1‑196 (MQ=255)
                                                                                 aTGATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCtt                                                                                                                                                                                                       <  1:819584/207‑1 (MQ=255)
                                                                                   gATAAGCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGCTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAAc                                                                                                                                                                                                                          >  1:668244/1‑186 (MQ=255)
                                                                                        gCACGGTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAAc                                                                                                                                                     >  1:30959/1‑250 (MQ=255)
                                                                                           cggTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAAc                                                                                                                                                                                                                          >  1:21905/3‑178 (MQ=255)
                                                                                           cggTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAc                                                                                                                                                                                                               >  1:253348/3‑189 (MQ=255)
                                                                                             gTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCtttt                                                                                                                                                >  1:802621/1‑250 (MQ=255)
                                                                                             gTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCtttt                                                                                                                                                >  1:751666/1‑250 (MQ=255)
                                                                                             gTACGATCTTGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCtttt                                                                                                                                                >  1:306366/1‑250 (MQ=255)
                                                                                                     ttGGCAAATTTTGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTgaca                                                                                                                                       <  1:468003/251‑4 (MQ=255)
                                                                                                             ttttGTGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCTTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGa                                                                                                                               >  1:799576/1‑251 (MQ=255)
                                                                                                              tttgtgcatattatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGAt                                                                                                                              <  1:348178/247‑1 (MQ=255)
                                                                                                                 gtgcatattatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTgcgcgcc                                                                                                                                                                             <  1:839756/200‑4 (MQ=255)
                                                                                                                    catattatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGtt                                                                                                                         <  1:661249/250‑1 (MQ=255)
                                                                                                                     atattatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGAt                                                                                                                              >  1:569305/1‑244 (MQ=255)
                                                                                                                     atattatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTaa                                                                                                                       >  1:172610/1‑251 (MQ=255)
                                                                                                                      tattatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTaa                                                                                                                       >  1:813030/1‑250 (MQ=255)
                                                                                                                       attatgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATaa                                                                                                                                                                                                                <  1:388843/160‑1 (MQ=255)
                                                                                                                          atgcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAcc                                                                                                                                                                                                              >  1:440835/1‑159 (MQ=255)
                                                                                                                            gcataATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAcc                                                                                                                                                                                                              >  1:14150/1‑157 (MQ=255)
                                                                                                                               taATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATtc                                                                                                             <  1:833537/251‑1 (MQ=255)
                                                                                                                                       ttttCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGAt                                                                                                     <  1:705208/251‑1 (MQ=255)
                                                                                                                                        tttCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATa                                                                                                    <  1:885928/251‑1 (MQ=255)
                                                                                                                                               ttCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAAc                                                                                                                                                                                                                          <  1:13101/126‑1 (MQ=255)
                                                                                                                                                tCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGAtt                                                                                            <  1:563836/251‑1 (MQ=255)
                                                                                                                                                  gTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAAcc                                                                                                                                                    <  1:81868/193‑1 (MQ=255)
                                                                                                                                                  gTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTctctct                                                                                                        <  1:661709/237‑1 (MQ=255)
                                                                                                                                                       cAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAAc                                                                                                                                                                                                               <  1:330259/129‑1 (MQ=255)
                                                                                                                                                         aGTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAaca                                                                                    >  1:360603/1‑250 (MQ=255)
                                                                                                                                                          gTGCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCgg                                                                                                                                >  1:72665/1‑205 (MQ=255)
                                                                                                                                                            gCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTgcg                                                                                                                                                                                 >  1:465836/1‑154 (MQ=255)
                                                                                                                                                            gCACTGGTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACAtt                                                                                >  1:677833/1‑251 (MQ=255)
                                                                                                                                                                 ggTTGCTTCATCAAAAATCAAAATCCGTGGGTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTg                                                                                                                            <  1:768141/202‑1 (MQ=255)
                                                                                                                                                                                              ggTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCgg                                                                                                                                <  1:684436/169‑1 (MQ=255)
                                                                                                                                                                                              ggTTATTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGgcgtaa                                               >  1:496902/1‑247 (MQ=255)
                                                                                                                                                                                                  aTTGACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATtc                                                                                                             <  1:790001/184‑1 (MQ=255)
                                                                                                                                                                                                     gACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATtc                                                                                                             <  1:11855/181‑1 (MQ=255)
                                                                                                                                                                                                     gACTAATGCCCTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGttt                                        >  1:592006/1‑250 (MQ=255)
                                                                                                                                                                                                             cccTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCgg                                 >  1:309460/1‑249 (MQ=255)
                                                                                                                                                                                                             cccTTGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCt                               <  1:267016/251‑1 (MQ=255)
                                                                                                                                                                                                                 tGCTATCGCGATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTTCCCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAgt                            >  1:58778/1‑250 (MQ=255)
                                                                                                                                                                                                                       cgcgATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAAt                     >  1:46291/1‑251 (MQ=255)
                                                                                                                                                                                                                         cgATCCGTTGGCGTTGTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCg                   <  1:310193/251‑1 (MQ=255)
                                                                                                                                                                                                                                        gTCCTCCGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAg    >  1:679483/1‑251 (MQ=255)
                                                                                                                                                                                                                                          cctccGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGa   >  1:548547/1‑250 (MQ=255)
                                                                                                                                                                                                                                          cctccGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGa   >  1:480375/1‑250 (MQ=255)
                                                                                                                                                                                                                                          cctccGGACAGACCGGCTCCCTGTT‑CCCCCACAACAGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCGCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGACATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAGGACGACACCTACTTGCCGGCGTAACCAGTTTGGATCGGCTAGTGCCAAATCGTGACCATCAATTAAGAc  <  1:234371/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                 
TGCTTGCCTTGTTCGATGATTTCACCTTTGTCCATCACAATAATGCGATCAGCATTTTTTACAGTAGAAAGGCGGTGAGCAATGATAAGCACAGTACGATTTTGGCAAATTTTATGCATATTATGCATAATGATATTTTCAGATTCGTAATCAAGTGCACTGGTTGCTTCATCAAAAATCAAAATCCTTGGGTTATTGACTAGTGCCCTTGCTATCGCGATCCGTTGACGTTGTCCTCCGGACAAACCGGCTCCCTGTT‑CCCCCACAACCGTGTTATAACCTTCTCTTAATTCAGAAATAAAATCGTGCGCTCCCGCAAGTTTTGCCGCGGCAATAACCTTTTCCATTGGCATTCCCGGATTGGTTAACGCAATATTCTCTCTGATACTTCGATTAAGCAACACATTATCTTGCAAGACGACACCGACTTGCCGGCGCAACCAGTTTGGATCGGCTAGCGCCAAATCGTGACCGTCAATTAAGAC  >  1/1818896‑1819380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑