Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,818,493 G→C intergenic (+36593/+16891) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,818,4930GC100.0% 180.1 / NA 59intergenic (+36593/+16891)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (30/29);  total (30/29)

TCAGTAAAGTCACTCTTTTTTGATCGTTTTCCGTCATAAAAGGTAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCCAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATGTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCAAATTTTCCTGAAGCCGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTTTCAATTAATTCCAAATGCGCGGGCAGAAATTCATTTTCATCTTTTTCTCTAACCGGAGAATCAAGCTG  >  1/1818250‑1818736
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                   
tCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAAcc                                                                                                                                                                                                                                              <  1:533356/251‑1 (MQ=255)
 cAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCa                                                                                                                                                                                                                                             >  1:93783/1‑251 (MQ=255)
 cAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCa                                                                                                                                                                                                                                             >  1:440516/1‑251 (MQ=255)
   gTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAAt                                                                                                                                                                                                                                           >  1:107242/1‑251 (MQ=255)
                tttttGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGATCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCg                                                                                                                                                                                                                              >  1:429160/1‑251 (MQ=255)
                                gTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTg                                                                                                                                                                                                                >  1:293067/1‑249 (MQ=255)
                                           caaaTCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCtt                                                                                                                                                                                                    <  1:178218/249‑1 (MQ=255)
                                                cAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGcg                                                                                                                                                                                              <  1:581329/251‑2 (MQ=255)
                                                               cTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGcg                                                                                                                                                                               <  1:889483/251‑2 (MQ=255)
                                                                                  tttttCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACAt                                                                                                                                                            <  1:689656/251‑1 (MQ=255)
                                                                                  tttttCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACAt                                                                                                                                                            <  1:130966/251‑1 (MQ=255)
                                                                                       cAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTa                                                                                                                                                       >  1:575699/1‑251 (MQ=255)
                                                                                             cTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAg                                                                                                                                                    <  1:811165/248‑1 (MQ=255)
                                                                                             cTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAg                                                                                                                                                    <  1:625081/248‑1 (MQ=255)
                                                                                             cTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAg                                                                                                                                                    <  1:5637/248‑1 (MQ=255)
                                                                                             cTTCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGAt                                                                                                                                                  <  1:377746/250‑1 (MQ=255)
                                                                                              ttCCAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAg                                                                                                                                                <  1:211954/251‑1 (MQ=255)
                                                                                                ccAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGaa                                                                                                                                              >  1:505605/1‑251 (MQ=255)
                                                                                                 cAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTc                                                                                                                                                                                                                    >  1:499043/1‑180 (MQ=255)
                                                                                                 cAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCcaca                                                                                                                                                             <  1:172566/235‑1 (MQ=255)
                                                                                                 cAATAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGaaa                                                                                                                                             <  1:353509/251‑1 (MQ=255)
                                                                                                  aaTAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAAc                                                                                                                                            <  1:717276/251‑1 (MQ=255)
                                                                                                  aaTAAAGATTTATAACGAAATTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAAc                                                                                                                                            <  1:784455/251‑1 (MQ=255)
                                                                                                                   aaaTTCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTa                                                                                                                           >  1:288985/1‑251 (MQ=255)
                                                                                                                      ttCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGAt                                                                                                                                                  >  1:219288/1‑225 (MQ=255)
                                                                                                                      ttCCTCTAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACaa                                                                                                                                          >  1:567014/1‑233 (MQ=255)
                                                                                                                        cctctAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTTGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAg                                                                                                                                                    <  1:427284/221‑1 (MQ=255)
                                                                                                                         ctctaGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAaga                                                                                                                     >  1:551969/5‑251 (MQ=255)
                                                                                                                              gTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATa                                                                                                                >  1:692321/1‑251 (MQ=255)
                                                                                                                                   gCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGa                                                                                                           >  1:680147/1‑251 (MQ=255)
                                                                                                                                    cTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATgg                                                                                                            <  1:4919/249‑1 (MQ=255)
                                                                                                                                        agaAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATaa                                                                                                       <  1:793181/250‑1 (MQ=255)
                                                                                                                                          aaatcGATGTCTTCGTTTTTAACGTATCCGCTTCGGCGCCAAGTGCGGTCAGTTTTAACTATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATAACTTTAACCAATGAATGTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAAAAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGa                                                                                                     <  1:321469/246‑1 (MQ=255)
                                                                                                                                                  gTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATgg                                                                                                            >  1:161353/1‑235 (MQ=255)
                                                                                                                                                  gTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCg                                                                                            >  1:825035/1‑251 (MQ=255)
                                                                                                                                                         tttttAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATa                                                                                                                                                                      >  1:328932/1‑170 (MQ=255)
                                                                                                                                                         tttttAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCa                                                                                     >  1:808827/1‑251 (MQ=255)
                                                                                                                                                                cGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAAt                                                                                                              <  1:594377/219‑1 (MQ=255)
                                                                                                                                                                  tATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACa                                                                            <  1:361077/251‑1 (MQ=255)
                                                                                                                                                                    tCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAgg                                                                          <  1:623000/251‑1 (MQ=255)
                                                                                                                                                                             gCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAAttt                                                                                                                                                                  >  1:187208/1‑154 (MQ=255)
                                                                                                                                                                              cACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATgg                                                                                                            <  1:218734/207‑1 (MQ=255)
                                                                                                                                                                               aCCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATa                                                                                                                                                 <  1:104328/169‑1 (MQ=255)
                                                                                                                                                                                           cAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTCTCAATTAATTCCAAATgcg                                                   >  1:331200/1‑251 (MQ=255)
                                                                                                                                                                                             gTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGc                                                                                                                                                                                                      >  1:385896/1‑102 (MQ=255)
                                                                                                                                                                                             gTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGAt                                                                                                                                                  <  1:370184/154‑1 (MQ=255)
                                                                                                                                                                                             gTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACaataat                                                                                                                                      >  1:264797/1‑166 (MQ=255)
                                                                                                                                                                                             gTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATgg                                                                                                            >  1:624940/1‑192 (MQ=255)
                                                                                                                                                                                             gTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAAt                                                                                                         >  1:483569/1‑195 (MQ=255)
                                                                                                                                                                                               tttAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATAc                                                                             >  1:788007/1‑221 (MQ=255)
                                                                                                                                                                                                 tAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTCTCAATTAATTCCAAATGCGCGGGCa                                             >  1:741374/1‑251 (MQ=255)
                                                                                                                                                                                                    cAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTCTCAATTAATTCCAAATGCGCGGGCAGaa                                          >  1:303344/1‑251 (MQ=255)
                                                                                                                                                                                                       tAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGac                                                                                                    <  1:630819/190‑1 (MQ=255)
                                                                                                                                                                                                        aGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGAt                                                                                                                                                  >  1:206327/1‑143 (MQ=255)
                                                                                                                                                                                                                   tttCACGTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAAt                                                                                                         <  1:829952/173‑1 (MQ=255)
                                                                                                                                                                                                                         gTATTCGCCCTCTTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAgg                                                                          <  1:784836/198‑1 (MQ=255)
                                                                                                                                                                                                                                    ctTTCACAAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTCTCAATTAATTCCAAATGCGCGGGCAGAAATTCATTTTCATCTTTTTCTCTAATCGGAGaa          >  1:642871/1‑251 (MQ=255)
                                                                                                                                                                                                                                        cacaAAAATATCTTTAACCAATGAATTTTCAATCGGTTTAATTTc                                                                                                                                                                                                                    >  1:271096/1‑45 (MQ=255)
                                                                                                                                                                                                                                            aaaaTATCTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCGAATTTTCCTGAAGCGGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTCTCAATTAATTCCAAATGCGCGGGCAGAAATTCATTTTCATCTTTTTCTCTAATCGGAGAATCAAGCTg  <  1:401258/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                   
TCAGTAAAGTCACTCTTTTTTGATCGTTTTCCGTCATAAAAGGTAAATCAATTTTAGAAAAATCTAATATTGGTAATTGATCTTTTTCAACAGCTTCCAATAAAGATTTATAACGAAATTCCTCCAGTTTAGCTTGAGAAAGCGATGTCTTCGTTTTTAACGTATCCGCTTCGGCACCAAGTGCGGTCAGTTTTAACAATAGTTCACCCTTTTTCACGTATTCGCCCTCTTTCACAAAAATATGTTTAACCAATGAATTTTCAATCGGTTTAATTTCTTTGCTTCTCCCGCTTAGTGCAAATTTTCCTGAAGCCGTTGCGATAATTTCCACATTGCTAAAGATAGAAACAATAATCGCTAAAGTTAAAAAGAGCATAATGGAATAAGACACGAATCGTGGTGCATTTGATACAGGTGTTTCAATTAATTCCAAATGCGCGGGCAGAAATTCATTTTCATCTTTTTCTCTAACCGGAGAATCAAGCTG  >  1/1818250‑1818736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑