| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,818,122 | C→T | intergenic (+36222/+17262) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,818,122 | 0 | C | T | 100.0% | 180.7 / NA | 64 | intergenic (+36222/+17262) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (32/32); total (32/32) | |||||||||||
CAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCGTTTTCAACTTGCATTAAACTCGCCTTATATACCTCAAGCTCATTGATTGCATCCTGATATTTATTCTCTTCATCTAAAACTGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGCTCTGTATTAATCAGACCTTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCCGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGTTCTTCAATCAGTAAAGTCACTCTTTTTTGATCGTTTTCCGTCATAAAAGGTAAATCAATTTTAGAAAAATCTAATATTGGTAAT > 1/1817879‑1818326 | cAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt < 1:39352/251‑1 (MQ=255)cAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt < 1:318696/251‑1 (MQ=255) aaTTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:513042/251‑1 (MQ=255) aaTTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:193769/251‑1 (MQ=255) aTCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCat > 1:799740/1‑251 (MQ=255) gTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt > 1:601263/1‑225 (MQ=255) tAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAAc < 1:408547/251‑1 (MQ=255) tAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAAc < 1:198472/251‑1 (MQ=255) atatCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAg < 1:782420/251‑1 (MQ=255) aCAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGctt > 1:670150/1‑249 (MQ=255) ttGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt < 1:219466/191‑1 (MQ=255) gACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt > 1:116335/1‑185 (MQ=255) gACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTaa > 1:435061/1‑251 (MQ=255) cTGCTCTTCTTTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAgg < 1:183096/251‑1 (MQ=255) tcttTGGCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTctgc > 1:733433/1‑218 (MQ=255) ggCCAATAAAACTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATgg > 1:406150/1‑250 (MQ=255) aaaaCTTCATTTTCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCAGCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGttt < 1:439934/251‑1 (MQ=255) cattttCAACTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCaa > 1:647008/3‑251 (MQ=255) cTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATGTTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:121285/251‑1 (MQ=255) cTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:747743/251‑1 (MQ=255) cTTGCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:460123/251‑1 (MQ=255) gCATTAAACTCGCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTg > 1:839066/1‑250 (MQ=255) gCCTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTc < 1:743587/154‑1 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTTTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATAttttt > 1:126148/1‑147 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:425224/131‑1 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc > 1:870081/1‑131 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGt > 1:199800/1‑251 (MQ=255) ccTTATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGt > 1:352678/1‑251 (MQ=255) ttATATACTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTaa > 1:75601/1‑251 (MQ=255) atataCTTCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAAc > 1:33051/1‑161 (MQ=255) tacttCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:395105/225‑1 (MQ=255) cttCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:379561/225‑1 (MQ=255) cttCAAGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCAc > 1:262639/3‑250 (MQ=255) aGCTCATTGATTGCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCtttt > 1:6896/1‑251 (MQ=255) gattgCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAAcc > 1:52450/1‑114 (MQ=255) attgCATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAgg > 1:845355/1‑178 (MQ=255) cATCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGt < 1:542720/175‑1 (MQ=255) tCCTGATATTTATTTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATc < 1:408999/219‑1 (MQ=255) atatTTAATTTCTTCAACTAAAACCCTAAGTTTTTCAAAAGCATTGTT‑CTTAAATAAAGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATaa < 1:547933/251‑1 (MQ=255) tatttattTTCTTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:519736/201‑1 (MQ=255) attttctTCATCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt < 1:531537/192‑1 (MQ=255) aTCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTAt > 1:819883/1‑77 (MQ=255) aTCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAAt > 1:871768/1‑187 (MQ=255) aTCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAAttt > 1:833953/1‑251 (MQ=255) aTCTAAAACCGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAAttt > 1:711612/1‑251 (MQ=255) aaccgTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGttt > 1:813296/5‑165 (MQ=255) accgTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGaaaa > 1:889527/4‑251 (MQ=255) gTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTgctc < 1:351968/178‑4 (MQ=255) tttGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:742546/251‑1 (MQ=255) ttGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTttatta > 1:494630/1‑125 (MQ=255) gCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCa > 1:63949/1‑158 (MQ=255) cAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGt > 1:236792/1‑251 (MQ=255) gTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTag > 1:735082/1‑153 (MQ=255) tCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAg < 1:423943/175‑1 (MQ=255) tCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:537445/236‑1 (MQ=255) ccTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATc < 1:898900/50‑1 (MQ=255) ccTTATATAAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAggc < 1:10206/209‑2 (MQ=255) atataAGGCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:416354/231‑1 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATc > 1:694981/1‑156 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAggc < 1:547350/198‑2 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAgg < 1:364500/197‑1 (MQ=255) gCTCTAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAatat < 1:567329/224‑1 (MQ=255) ctctAAAATCATCCAATCGGACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAgg > 1:898139/1‑108 (MQ=255) gACTTGTTCTGTATTAATCAAACCCTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCTGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGCTCTTCAATCAGTAAAGTCACCCTTTTTTGATCGTTTTCCGTCATAAAAGGCAAATCAATTTTAGAAAAATCTAATATTGGTAAt > 1:101900/1‑211 (MQ=255) | CAATAAATTCACATTATCCGTCGCCTGTTTTAGCTTGTCTAAAATATCATTTTTGAACAATTGTGTGACTAATTCCTGCTCTTCTTTGGCCAATAAAACTTCGTTTTCAACTTGCATTAAACTCGCCTTATATACCTCAAGCTCATTGATTGCATCCTGATATTTATTCTCTTCATCTAAAACTGTATGTTTTGCAATAGCA‑TGTTCCTTATATAAGGCTCTAAAATCATCCAATCGGACTTGCTCTGTATTAATCAGACCTTCATATTTTTTTATTCGTGCCAAATAACTGAGTTTTTCCGCTTCTTTTTTATTAAGATTCAAGGTTTTCTGATGGCGTTGTTTTTGCCAAGTAGAGAATTGTTCTTCAATCAGTAAAGTCACTCTTTTTTGATCGTTTTCCGTCATAAAAGGTAAATCAATTTTAGAAAAATCTAATATTGGTAAT > 1/1817879‑1818326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |