| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,817,048 | G→T | intergenic (+35148/+18336) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,817,048 | 0 | G | T | 98.2% | 163.0 / ‑6.5 | 57 | intergenic (+35148/+18336) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (33/23); minor base C (0/1); total (33/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAGTGTTCGGCTCGAAAGGCGCGGTACAAACCCGCAATGATACCGATTCCACCGCCGTGTATTCCTGTGAAGCGGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTAGAACGCTATATGCAATCTTTCGCCGATGAAATGGCGTGCTTTGTGGATTCCGTAGTAAACGACAAACCGACTTTAGTCAACGGCAACGACGGCTTGCAACCTGTGCTGATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCT‑AAAGCATTTTCTGATGCT‑AAAAAAGACCTGAAACCGATTCAGGTCTTTTGTTTTTCGG‑TGATTAGAAAACACTTGAATTTTTGACCGCACTTTTGCCCCGAAAACCTACAACGGGCTTTCCACTTGCAGGCGTTCGCAAATGCCGGTAATGCGCTTTCAATTATAAATCCATCATC > 1/1816830‑1817288 | gAAGTGTTCGGCTCGAAAGGCGCGGTACAAACCCGTAATGATACCGATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTtgatga > 1:823111/1‑251 (MQ=255) gTACAAACCCGTAATGATACCGATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGa > 1:185426/1‑251 (MQ=255) gTACAAACCCGTAATGATACCGATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGa > 1:880564/1‑251 (MQ=255) cccGTAATGATACCGATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGc > 1:487487/1‑250 (MQ=255) gtaaTGATACCGATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCT‑aa > 1:887019/3‑251 (MQ=255) tACCGATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCAtt > 1:443160/1‑251 (MQ=255) gATTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCAtttccg > 1:503848/1‑248 (MQ=255) aTTCTACCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCAtttccga > 1:846995/1‑247 (MQ=255) ttctaCCGCCGTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCAtttccgat > 1:513850/5‑246 (MQ=255) cgTGTATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGAT‑aaaaaa < 1:396822/251‑1 (MQ=255) gtgtATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGcc < 1:705786/202‑1 (MQ=255) tgtATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTCATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGAT‑aaaaaaag < 1:49216/251‑3 (MQ=255) tATTCCTGTGAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGAT‑aaaaaaagac < 1:349131/251‑5 (MQ=255) tgtgAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGaag < 1:135529/251‑2 (MQ=255) tgtgAAGCAGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGaag < 1:393287/251‑2 (MQ=255) cGAAAAACCGAAATATTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGttt < 1:858422/251‑1 (MQ=255) tatTTCTTCCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCggcgggttaa > 1:539021/1‑243 (MQ=255) tcCTGGAACGCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCggcgggttaaaaaaca > 1:485296/1‑236 (MQ=255) gCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGaagcgaattc > 1:814593/1‑201 (MQ=255) gCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAAtttt > 1:418922/1‑251 (MQ=255) gCTATATGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAAtttt > 1:496082/1‑251 (MQ=255) atatGCAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAACA‑TTTCCGATGATAAAAAAAGACCTGa > 1:452156/1‑197 (MQ=255) cAATCTTTCGCTGACGAAATGGCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAg > 1:426257/1‑130 (MQ=255) ggCGTGCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACa > 1:894462/1‑251 (MQ=255) gCTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACggg > 1:245466/1‑251 (MQ=255) cTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGccc < 1:729708/111‑1 (MQ=255) cTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACggg < 1:803288/250‑1 (MQ=255) cTTTGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGc < 1:296894/251‑1 (MQ=255) ttGTGGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACggg < 1:707937/248‑1 (MQ=255) gtgGATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCttt > 1:230784/1‑250 (MQ=255) ggATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCggcgggttaaaaaac < 1:435423/200‑14 (MQ=255) gATTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcgg < 1:568767/250‑3 (MQ=255) aTTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAAt > 1:785189/1‑206 (MQ=255) aTTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtt > 1:679263/1‑247 (MQ=255) aTTCCGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtt > 1:27254/1‑247 (MQ=255) ccGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttg > 1:312966/1‑244 (MQ=255) ccGTAGTGAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCT‑aaaag > 1:672073/1‑126 (MQ=255) gtagtgAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgcag > 1:28084/1‑242 (MQ=255) tagtgAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgcagg < 1:569377/251‑11 (MQ=255) tagtgAACGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgcagg < 1:816868/251‑11 (MQ=255) tgaaCGACAAACCGACTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCg < 1:384749/248‑1 (MQ=255) aCTTTAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGt > 1:881958/1‑251 (MQ=255) tttAGTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTaa < 1:325185/251‑1 (MQ=255) gTCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggg > 1:612072/1‑249 (MQ=255) tCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtg < 1:861517/251‑4 (MQ=255) tCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtg < 1:891276/251‑4 (MQ=255) tCAACGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATgg < 1:778134/249‑2 (MQ=255) aCGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgaga < 1:603299/251‑7 (MQ=255) cGGCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaa < 1:620902/251‑8 (MQ=255) cGGCAACGACGGTTTGCAACATGTGCTTATCGCGTTGGCGAGAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCAGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACTCTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaa < 1:452723/251‑8 (MQ=255) ggCAACGACGGTTTGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaat > 1:165049/1‑243 (MQ=255) gtttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTcggtttgca > 1:56981/3‑202 (MQ=255) gtttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggag > 1:52282/3‑233 (MQ=255) gtttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCCACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggag > 1:55082/3‑233 (MQ=255) tttGCAACCTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggag < 1:375722/249‑19 (MQ=255) ccTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggagcggataa > 1:799382/1‑225 (MQ=255) ccTGTGCTTATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCTAAAAGCA‑TTTCCGATGATAAAAAAAGACCTGAAGCGAATTCAGGTCTTTTGTTTTTCGGCGGGTTAAAAAACACTTGAATTTTTGACCGCACTTTTGCCCCG‑AAACCTACAACGGGCTTTCGGTTTGCAGGCGTTCGCAAATGTCGGTAATggtgagaatgaggctggagcggataa > 1:332391/1‑225 (MQ=255) | GAAGTGTTCGGCTCGAAAGGCGCGGTACAAACCCGCAATGATACCGATTCCACCGCCGTGTATTCCTGTGAAGCGGGCGTGATTGCCGAAAAACCGAAATATTTCTTCCTAGAACGCTATATGCAATCTTTCGCCGATGAAATGGCGTGCTTTGTGGATTCCGTAGTAAACGACAAACCGACTTTAGTCAACGGCAACGACGGCTTGCAACCTGTGCTGATCGCGTTGGCGGCAAAACGTTCTCTTGATGAAGGACGCCCGGTGAAACTGGCGGAAATCGCCT‑AAAGCATTTTCTGATGCT‑AAAAAAGACCTGAAACCGATTCAGGTCTTTTGTTTTTCGG‑TGATTAGAAAACACTTGAATTTTTGACCGCACTTTTGCCCCGAAAACCTACAACGGGCTTTCCACTTGCAGGCGTTCGCAAATGCCGGTAATGCGCTTTCAATTATAAATCCATCATC > 1/1816830‑1817288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |