| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,816,228 | C→A | intergenic (+34328/+19156) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,816,228 | 0 | C | A | 98.5% | 185.5 / NA | 67 | intergenic (+34328/+19156) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (29/37); minor base G (0/1); total (29/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAAACACAATTACAAAGGCTGGATGGTTGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGCGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTGCATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCACACAATGGGCGAAAGGCATGGGCATTCCACACGTTTATGAAGACTACAAACACATTCTGCAGGATCCTGAAATTGATGCTGTGTTGGTTTGTTCTTCCACAAACACCCACGCACCGATTTCCATTGAAGCCGCTCGTGCCGGCAAACACATTTTCTGTGAAAAACCGGTGGATGCCGATGTGAATCGCATTAAAGAAGTCTTAGTCGAAGTGGAAAAAGC > 1/1815983‑1816447 | agaaaCACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACaa < 1:643162/248‑1 (MQ=255) caATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGaa > 1:95155/1‑251 (MQ=255) ttACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGATACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAgg < 1:433452/251‑1 (MQ=255) ttACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAgg > 1:578994/1‑251 (MQ=255) ggCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATggg > 1:488546/1‑250 (MQ=255) tGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTccgc < 1:687186/251‑3 (MQ=255) gAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAg < 1:837355/222‑1 (MQ=255) gAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGa > 1:856560/1‑247 (MQ=255) aaCAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGAc < 1:492046/250‑1 (MQ=255) tCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAaca < 1:529526/251‑1 (MQ=255) ccGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAacac < 1:489647/251‑1 (MQ=255) ccGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAacac < 1:760217/251‑1 (MQ=255) ccGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAacac < 1:720781/251‑1 (MQ=255) tCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATggg < 1:376694/200‑1 (MQ=255) cATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAaca < 1:774695/234‑1 (MQ=255) cATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATc > 1:142155/1‑248 (MQ=255) gCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATaaa < 1:230793/221‑1 (MQ=255) gCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAAt > 1:799284/1‑244 (MQ=255) gCCGTAAATACATTAAAGAAACAGCGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGttt > 1:151793/1‑251 (MQ=255) ccGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTGCAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAGCAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTg < 1:130115/251‑1 (MQ=255) gTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACg < 1:791731/191‑1 (MQ=255) aTACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGACATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGttcct > 1:434306/1‑248 (MQ=255) cATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCca > 1:91914/1‑250 (MQ=255) ttAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAg < 1:24441/191‑1 (MQ=255) aaaCAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACAcc > 1:122438/1‑250 (MQ=255) cagtggggATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATggg > 1:696349/5‑149 (MQ=255) tggggATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACg < 1:830515/247‑1 (MQ=255) tggggATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGcgc < 1:782099/250‑3 (MQ=255) tggggATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGcgc < 1:623594/250‑3 (MQ=255) ggATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGttc > 1:588439/1‑228 (MQ=255) gATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAg < 1:221067/175‑1 (MQ=255) gATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAg < 1:195718/175‑1 (MQ=255) gATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGAt > 1:84756/1‑251 (MQ=255) cATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTg < 1:885502/251‑1 (MQ=255) tGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGtt < 1:732364/158‑1 (MQ=255) tGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAg > 1:797609/1‑165 (MQ=255) tGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGaa > 1:578386/1‑251 (MQ=255) gATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATGAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGtt > 1:433057/1‑211 (MQ=255) gATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAac > 1:193276/1‑173 (MQ=255) gATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTcc > 1:825602/1‑244 (MQ=255) aaGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGc < 1:301159/196‑1 (MQ=255) gTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAg < 1:263815/157‑1 (MQ=255) aGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAGACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGttc < 1:373150/207‑1 (MQ=255) ggTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTg < 1:183363/238‑1 (MQ=255) ggTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTg > 1:223126/1‑250 (MQ=255) ggTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTg > 1:372249/1‑250 (MQ=255) gTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAaca < 1:692033/163‑1 (MQ=255) gTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGc > 1:661052/1‑250 (MQ=255) cGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACAttt < 1:799236/251‑1 (MQ=255) ggTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACAtttt > 1:313609/1‑251 (MQ=255) gTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAgg < 1:881209/112‑1 (MQ=255) gTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACAtttt > 1:91786/1‑250 (MQ=255) gTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGaaaaa > 1:594170/1‑251 (MQ=255) gTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGaaaaa > 1:162760/1‑251 (MQ=255) aTTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGAt < 1:326067/251‑1 (MQ=255) aaGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGAtg < 1:700048/251‑1 (MQ=255) cATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGAtgtaa > 1:513249/1‑249 (MQ=255) ttACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAaca < 1:289971/118‑1 (MQ=255) ttACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGATGTAAAt < 1:330953/251‑1 (MQ=255) aCAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAac < 1:136855/115‑1 (MQ=255) aaaTATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAAtt > 1:339324/1‑135 (MQ=255) aaGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGATGTAAATCGCATTAAAGAAGTc < 1:866012/251‑1 (MQ=255) tGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGATGTAAATCGCATTAAAGAAGTCTTAgccg < 1:383919/251‑4 (MQ=255) aaTCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGATGTAAATCGCATTAAAGAAGTc > 1:356828/1‑241 (MQ=255) aaGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGATGTAAATCGCATTAAAGAAGTCTTAGCCGAAGTGGaa < 1:461379/251‑1 (MQ=255) aTTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACACCCACGCGCCGATTTCCATTGAAGCCGCCCGTGCCGGCAAACACATTTTCTGCGAAAAACCGGTGGATGCCGATGTAAATCGCATTAAAGAAGTCTTAGCCGAAGTGGAAAAAGc < 1:198963/251‑1 (MQ=255) ccGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGAc > 1:111992/1‑71 (MQ=255) | AAAAACACAATTACAAAGGCTGGATGGTTGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGCGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTGCATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCACACAATGGGCGAAAGGCATGGGCATTCCACACGTTTATGAAGACTACAAACACATTCTGCAGGATCCTGAAATTGATGCTGTGTTGGTTTGTTCTTCCACAAACACCCACGCACCGATTTCCATTGAAGCCGCTCGTGCCGGCAAACACATTTTCTGTGAAAAACCGGTGGATGCCGATGTGAATCGCATTAAAGAAGTCTTAGTCGAAGTGGAAAAAGC > 1/1815983‑1816447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |