| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,816,091 | C→T | intergenic (+34191/+19293) | unknown → / ← unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,816,091 | 0 | C | T | 98.7% | 212.0 / ‑5.0 | 77 | intergenic (+34191/+19293) | unknown/unknown | tRNA‑Asp‑GTC/tRNA‑Lys‑CTT |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (30/46); total (31/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.79e-01 | |||||||||||
ATTTGAAAGACGTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGATGGCGTGATTGATTTCAGACCGATTTTCGACATTCTCGAAAAACACAATTACAAAGGCTGGATGGTTGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGCGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTGCATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCACACAATGGGCGAAAGGCATGGGCATTCCACACGTTTATGAAGACTACAAACACATTCTGCAGGATCCTGAAATTGATGCTGTGTTGGTTTGTTCTTCCACAAACACC > 1/1815845‑1816334 | aTTTGAAAGACGTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTgggg < 1:314402/251‑1 (MQ=255) tttGAAAGACGTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGa < 1:264535/251‑1 (MQ=255) aCGTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAAt < 1:410435/249‑1 (MQ=255) aCGTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATc < 1:720795/250‑1 (MQ=255) gTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACGGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATg > 1:444057/1‑251 (MQ=255) tGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGt < 1:783198/251‑1 (MQ=255) cGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGtattat < 1:221970/251‑1 (MQ=255) cGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCgg < 1:173437/251‑1 (MQ=255) aCGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGgcg > 1:10928/1‑251 (MQ=255) aGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCg > 1:119406/1‑251 (MQ=255) taatCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGt > 1:768542/1‑224 (MQ=255) cTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGtac < 1:242792/250‑3 (MQ=255) ttCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACAt < 1:224211/251‑1 (MQ=255) ttCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACAt < 1:641694/251‑1 (MQ=255) ccTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGAt > 1:628907/1‑195 (MQ=255) ccTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGtattat < 1:71008/221‑1 (MQ=255) ccTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTc < 1:589887/251‑1 (MQ=255) ggCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTc < 1:120500/225‑1 (MQ=255) tgcgtAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTa > 1:260412/1‑251 (MQ=255) tAAAGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACaa < 1:223979/250‑1 (MQ=255) aaGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAat < 1:67911/251‑1 (MQ=255) aaGGCACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAat < 1:112586/251‑1 (MQ=255) cACCTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGtattat < 1:149987/200‑1 (MQ=255) ccTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAatat < 1:804515/247‑1 (MQ=255) ccTTTACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAat < 1:519642/245‑1 (MQ=255) ttACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAg > 1:759565/1‑251 (MQ=255) ttACCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAg > 1:279479/1‑251 (MQ=255) aCCGTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAgg > 1:460268/1‑250 (MQ=255) gTGCCGGGCGACGGTGTGATTGATTTCAGACCGATTTTCGACACTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCa < 1:399743/171‑1 (MQ=255) ggCGACGGTGTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGtac < 1:715674/210‑3 (MQ=255) gcgacggtgTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATc < 1:770274/242‑1 (MQ=255) gtgTGATTGATTTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTc < 1:131493/205‑1 (MQ=255) attgattTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTc > 1:324893/1‑250 (MQ=255) tgattTCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGa < 1:754751/251‑1 (MQ=255) tttCAGACCGATTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGa < 1:725156/140‑1 (MQ=255) aTTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGtattat > 1:779788/1‑157 (MQ=255) aTTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGt > 1:375002/1‑176 (MQ=255) aTTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCAc > 1:869884/1‑250 (MQ=255) aTTTTCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGCCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAat > 1:267708/1‑204 (MQ=255) tCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATg < 1:436077/251‑1 (MQ=255) tCGACATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATg < 1:882931/251‑1 (MQ=255) aCATTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGc < 1:609196/251‑1 (MQ=255) aTTCTCGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTc < 1:101396/251‑1 (MQ=255) ctcGAGAAACACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACAt < 1:625390/173‑1 (MQ=255) cgagaaaCACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAgg > 1:156059/5‑200 (MQ=255) agaaaCACAATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACaa < 1:643162/248‑1 (MQ=255) caATTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGaa > 1:95155/1‑251 (MQ=255) aTTACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATc > 1:818297/1‑133 (MQ=255) ttACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGATACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAgg < 1:433452/251‑1 (MQ=255) ttACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAgg > 1:578994/1‑251 (MQ=255) tACAAAGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAg > 1:659049/1‑166 (MQ=255) aGGCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGtac > 1:465714/1‑149 (MQ=255) ggCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGTTTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATg > 1:609872/1‑207 (MQ=255) ggCTGGATGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATggg > 1:488546/1‑250 (MQ=255) tGGTCGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTccgc < 1:687186/251‑3 (MQ=255) gAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAg < 1:837355/222‑1 (MQ=255) gAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGa > 1:856560/1‑247 (MQ=255) aaCAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGAc < 1:492046/250‑1 (MQ=255) tCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAaca < 1:529526/251‑1 (MQ=255) ccGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAacac < 1:489647/251‑1 (MQ=255) ccGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAacac < 1:720781/251‑1 (MQ=255) ccGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAacac < 1:760217/251‑1 (MQ=255) gCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTc > 1:873574/1‑121 (MQ=255) tCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATggg < 1:376694/200‑1 (MQ=255) cATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAaca < 1:774695/234‑1 (MQ=255) cATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATc > 1:142155/1‑248 (MQ=255) gCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATaaa < 1:230793/221‑1 (MQ=255) gCCGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAAt > 1:799284/1‑244 (MQ=255) ccGTCAAAGGCCGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTc < 1:620446/77‑1 (MQ=255) gCCGTAAATACATTAAAGAAACAGCGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGttt > 1:151793/1‑251 (MQ=255) ccGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGtac > 1:230884/1‑80 (MQ=255) ccGTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTGCAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAGCAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTg < 1:130115/251‑1 (MQ=255) gTAAATACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACg < 1:791731/191‑1 (MQ=255) aTACATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGACATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGttcct > 1:434306/1‑248 (MQ=255) cATTAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCca > 1:91914/1‑250 (MQ=255) ttAAAGAAACAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAg < 1:24441/191‑1 (MQ=255) aaaCAGTGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTACATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCAAACAATGGGCGAAAGGCATGGGCATTCCGCACGTTTATGAAGACTATAAACACATTTTGCAGGATCCTGAAATTGATGCCGTGTTGGTTTGTTCCTCCACCAACAcc > 1:122438/1‑250 (MQ=255) | ATTTGAAAGACGTGCGCGATGAAGTGGTCGCCGACGTAAAAGCCAATAATCTGAGCTTCCTGGAAGGCGTGCGTAAAGGCACCTTTACCGTGCCGGGCGATGGCGTGATTGATTTCAGACCGATTTTCGACATTCTCGAAAAACACAATTACAAAGGCTGGATGGTTGTTGAAGCGGAACAGGATCCGGCAATCGCCAACCCATTTGAATATGCCGTCAAAGGCCGTAAATACATTAAAGAAACAGCGGGGATTTAATCATGATTAAAGTAGGTATTATCGGCGCCGGTCGTATCGGTCGCGTGCATTCCGAAAGCATTACAAAATATGTCAAAGGCGCTGAAATCAAAGCGATTTCCGATGTTCGCGTCACCGATGAGCTCACACAATGGGCGAAAGGCATGGGCATTCCACACGTTTATGAAGACTACAAACACATTCTGCAGGATCCTGAAATTGATGCTGTGTTGGTTTGTTCTTCCACAAACACC > 1/1815845‑1816334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |