Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,799,208 T→G intergenic (+17308/+36176) unknown → / ← unknown tRNA‑Asp‑GTC/tRNA‑Lys‑CTT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,799,2080TG100.0% 213.8 / NA 73intergenic (+17308/+36176)unknown/unknowntRNA‑Asp‑GTC/tRNA‑Lys‑CTT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (38/35);  total (38/35)

TTAACAATTTGTTGCCAATAAGGGTCAACGCCGAGCATATTTAATCC‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCTCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGGAAGAAGCGTCAATCGGACGACCATCAGAATAAAGT  >  1/1798972‑1799451
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                   
ttAAAAATTTGTTGCCAAAAAGGGTCAACGCGGAGCATATTTAATCC‑TTTATTGTTTGTCCAAAAAACCAATGCCCCGAAACCCCACATTGGGATCGTACC‑AAACCCCCCCCTAAAGAAACCCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAAc                                                                                                                                                                                                                                       <  1:321313/251‑1 (MQ=255)
            tccaaaaaggggccaccGCCGAACATA‑TTAATCCTTTTATTGTTTGTCCCAAAAATCAAGCCGCCGATACCCCCCTTTGGGACCGTCCCAAACCCCCCACTAAAGGAAC‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGt                                                                                                                                                                                                                           <  1:93290/235‑1 (MQ=255)
                 aTAAGGGTCAACGCCGAGCATATTTAATCC‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTACATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGAt                                                                                                                                                                                                                      >  1:439120/1‑251 (MQ=255)
                            cgccggtcattttaaaTCT‑TTTATTGGTTGTCCAAAAAATAAAGGCGCCGAGAACGCAAATGGGGATCGCACAAAAACCCCCCCTAAAGAAAC‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATa                                                                                                                                                                                                           <  1:110415/237‑1 (MQ=255)
                                gAGCATATTTAATCC‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATAc                                                                                                                                                                                                          >  1:255436/1‑248 (MQ=255)
                                     tatTTAATCC‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAAtt                                                                                                                                                                                                  >  1:774736/1‑251 (MQ=255)
                                           aTCC‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCACCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAg                                                                                                                                                                                              >  1:199458/1‑249 (MQ=255)
                                              c‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATAc                                                                                                                                                                                                          >  1:71796/1‑234 (MQ=255)
                                                  tATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCAttt                                                                                                                                                                                      >  1:208468/1‑251 (MQ=255)
                                                     tGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAg                                                                                                                                                                                   >  1:747031/1‑251 (MQ=255)
                                                        ttGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGttt                                                                                                                                                                                >  1:98601/1‑251 (MQ=255)
                                                             ccGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGc                                                                                                                                                                            >  1:651663/1‑250 (MQ=255)
                                                                   aTCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACaa                                                                                                                                                                                                     >  1:327167/1‑219 (MQ=255)
                                                                    caacggcgcCGAAACCGCACTTGGGGATCGTCCCAAACCCCCCACTAAAGAAAC‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGAtt                                                                                                                                                                                                                     <  1:281730/197‑1 (MQ=255)
                                                                                       caTTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGCTTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATg                                                                                                                                                 >  1:433921/1‑251 (MQ=255)
                                                                                       caTTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATg                                                                                                                                                 >  1:67217/1‑251 (MQ=255)
                                                                                       caTTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATg                                                                                                                                                 >  1:496535/1‑251 (MQ=255)
                                                                                       caTTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATg                                                                                                                                                 >  1:144050/1‑251 (MQ=255)
                                                                                                 gTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACgg                                                                                                                                         >  1:863078/1‑249 (MQ=255)
                                                                                                  tACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATaaa                                                                                                                                                                                                                                        >  1:620187/1‑153 (MQ=255)
                                                                                                  tACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACgg                                                                                                                                         >  1:784514/1‑248 (MQ=255)
                                                                                                       aaaCCACCACTGAAGAAAC‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTaa                                                                                                                                 <  1:530238/251‑1 (MQ=255)
                                                                                                        accccccccctaaagaaacccccGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTaa                                                                                                                                 <  1:791768/232‑1 (MQ=255)
                                                                                                        aaCCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTaaa                                                                                                                                >  1:620559/1‑251 (MQ=255)
                                                                                                          cccccacTAAAGAAAC‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAat                                                                                                                              <  1:673522/248‑1 (MQ=255)
                                                                                                          ccaccaCTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAat                                                                                                                              >  1:783861/1‑251 (MQ=255)
                                                                                                             caaactaaagaaacccccGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAatat                                                                                                                            <  1:315632/237‑1 (MQ=255)
                                                                                                               acTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATgg                                                                                                                          >  1:518730/1‑250 (MQ=255)
                                                                                                                actaaagaaacccccGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGc                                                                                                                         <  1:551022/240‑1 (MQ=255)
                                                                                                                       aaa‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGAt                                                                                                                  >  1:413411/1‑250 (MQ=255)
                                                                                                                                  gATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTaaaa                                                                                                       >  1:99796/1‑251 (MQ=255)
                                                                                                                                   aTAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTaaaa                                                                                                       <  1:259619/250‑1 (MQ=255)
                                                                                                                                   aTAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTaaaa                                                                                                       <  1:733070/250‑1 (MQ=255)
                                                                                                                                          cTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAAc                                                                                               <  1:13956/251‑1 (MQ=255)
                                                                                                                                          cTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAAc                                                                                               <  1:291624/251‑1 (MQ=255)
                                                                                                                                          cTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAAc                                                                                               <  1:680410/251‑1 (MQ=255)
                                                                                                                                            gCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAAc                                                                                                                                                               <  1:743504/185‑1 (MQ=255)
                                                                                                                                                cAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTAc                                                                                          <  1:870078/250‑1 (MQ=255)
                                                                                                                                                cAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGACTGACGATCACAATTAAAATGTATAACAGTAc                                                                                          <  1:264289/250‑1 (MQ=255)
                                                                                                                                                    ggCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGAACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAACATAAAc                                                                                                                                                               >  1:432796/1‑177 (MQ=255)
                                                                                                                                                     gCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTg                                                                                                                                                                                           <  1:82462/148‑1 (MQ=255)
                                                                                                                                                     gCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATc                                                                                     <  1:503926/250‑1 (MQ=255)
                                                                                                                                                     gCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATc                                                                                     <  1:207723/250‑1 (MQ=255)
                                                                                                                                                             cTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACa                                                                                                                                                              <  1:596212/169‑1 (MQ=255)
                                                                                                                                                             cTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAAc                                                                             >  1:322390/1‑250 (MQ=255)
                                                                                                                                                                     ccAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAat                                                                     <  1:354768/250‑1 (MQ=255)
                                                                                                                                                                     ccAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAat                                                                     <  1:370173/250‑1 (MQ=255)
                                                                                                                                                                     ccAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAat                                                                     <  1:789144/250‑1 (MQ=255)
                                                                                                                                                                          ccATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAat                                                                                                                              <  1:381984/188‑1 (MQ=255)
                                                                                                                                                                          ccATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAAc                                                                                               >  1:570100/1‑219 (MQ=255)
                                                                                                                                                                               aGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCgg                                                          >  1:174138/1‑251 (MQ=255)
                                                                                                                                                                                gACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCgg                                                          >  1:853859/1‑250 (MQ=255)
                                                                                                                                                                                  cGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCaa                                                       >  1:811689/1‑251 (MQ=255)
                                                                                                                                                                                    ggTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAAt                                                      >  1:319023/1‑250 (MQ=255)
                                                                                                                                                                                      ttACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATcc                                                    <  1:594934/250‑1 (MQ=255)
                                                                                                                                                                                            gCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAAc                                                                                                                                                                                                                                       <  1:428456/65‑1 (MQ=255)
                                                                                                                                                                                            gCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATa                                                                                                                                                                                                           <  1:233026/93‑1 (MQ=255)
                                                                                                                                                                                            gCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATAc                                                                                                                                                                                                          >  1:733567/1‑94 (MQ=255)
                                                                                                                                                                                            gCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAg                                                                                                                                                                                   >  1:694405/1‑117 (MQ=255)
                                                                                                                                                                                            gCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTaaaa                                                                                                       >  1:202069/1‑193 (MQ=255)
                                                                                                                                                                                             cATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGtt                                                                                                                                                                                                                          <  1:325114/77‑1 (MQ=255)
                                                                                                                                                                                             cATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAat                                                                                                                              <  1:284517/169‑1 (MQ=255)
                                                                                                                                                                                                 aGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTaaaa                                                                                                       <  1:34358/188‑1 (MQ=255)
                                                                                                                                                                                                 aGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCtt                                        >  1:7994/1‑251 (MQ=255)
                                                                                                                                                                                                 aGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCtt                                        >  1:91817/1‑251 (MQ=255)
                                                                                                                                                                                                     cgcgCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGga                                    <  1:335388/251‑1 (MQ=255)
                                                                                                                                                                                                       cgccgcCAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGc                                          >  1:421099/1‑243 (MQ=255)
                                                                                                                                                                                                         ccgccAACAATGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATAc                                                                                                                                                                                                          <  1:489948/81‑1 (MQ=255)
                                                                                                                                                                                                               acaaTGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGc                                          >  1:826324/1‑235 (MQ=255)
                                                                                                                                                                                                               acaaTGCGCCGGCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGGaagaag                               >  1:765812/1‑246 (MQ=255)
                                                                                                                                                                                                                         ggCTAAACCGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGGAAGAAGCGTCAATCGgacga                 >  1:673048/1‑250 (MQ=255)
                                                                                                                                                                                                                                ccGGATAGCGCTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGGAAGAAGCGTCAATCGGACGACCATCAGa         <  1:109586/251‑1 (MQ=255)
                                                                                                                                                                                                                                        cgcTCCGCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGGAAGAAGCGTCAATCGGACGACCATCAGAATAAAGt  <  1:677695/250‑1 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                   
TTAACAATTTGTTGCCAATAAGGGTCAACGCCGAGCATATTTAATCC‑TTTATTGGTTGTACCGATAATCAATGCGCCGATAACGCACATTGGGATCGTACCGAAACCACCACTTAAGGAAA‑CCCCGCCGATAACGGCTGCCGCAATGGCATCAAGCTCCCACGCCAAGCCATAAGACGGGTTACCTGCATAAGTACGCGCCGCCAACAATGCGCCGGCTAAACCGGATAGCGCTCCTCCAAGGATATAAACCCAGATTAAAGTTCGATTGGTGTTAATACCACAAATTTTAGCTGCATTTAAGTTTCCGCCAACAGCATAAACATGGCGACCGAATGTTGAACGGCTGAGTAAAATATGGCTGACGATCACAATTAAAATGTATAACAGTACCAATCCCGGCAACCCTAAAATATTGACATCGGCAATCCAGGTAAAGGCTTCGGAAGAAGCGTCAATCGGACGACCATCAGAATAAAGT  >  1/1798972‑1799451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑