| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,779,799 | G→A | intergenic (+137441/‑1926) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,779,799 | 0 | G | A | 100.0% | 241.5 / NA | 82 | intergenic (+137441/‑1926) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (32/50); total (32/50) | |||||||||||
ATCACACTCAACATGATGAAAATCTTCGGCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCGCATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTGGAGGAAGGCGAAGATTTTATT > 1/1779552‑1780040 | aTCACACTCAACATGATGAAAATCTTCGGCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACAt > 1:358323/1‑251 (MQ=255) acacTCAACATGATGAAAATCTTCGGCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCa > 1:34967/1‑250 (MQ=255) acacTCAACATGATGAAAATCTTCGGCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCAc < 1:282284/251‑1 (MQ=255) tgatgaAAATCTTCGGCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTgggg > 1:772154/1‑247 (MQ=255) gCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGc < 1:546035/250‑1 (MQ=255) gCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCg > 1:479072/1‑251 (MQ=255) aGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAAc < 1:805698/250‑1 (MQ=255) tGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAgcg < 1:193210/251‑1 (MQ=255) tGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAgcg > 1:31544/1‑251 (MQ=255) gAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAgcgc > 1:54654/1‑250 (MQ=255) tCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTAc < 1:591057/251‑1 (MQ=255) aaCATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACAt < 1:741981/251‑1 (MQ=255) aaCATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACAt < 1:889884/251‑1 (MQ=255) aaCATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACAt < 1:59987/251‑1 (MQ=255) aCATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCAc > 1:102344/1‑207 (MQ=255) aCATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGa > 1:631416/1‑219 (MQ=255) cATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATgg < 1:171991/251‑1 (MQ=255) ttACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGgtg > 1:465593/1‑251 (MQ=255) tACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGgtgt < 1:843125/251‑1 (MQ=255) aCGCTTCATCGTAAAATGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTAGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:22523/251‑1 (MQ=255) aCGCTTCATCGTAAAAGGCAAACAATCCTATCAATCCCCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:892024/251‑1 (MQ=255) aCGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAGGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:871783/251‑1 (MQ=255) aCGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:317659/251‑1 (MQ=255) aCGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:729011/251‑1 (MQ=255) cTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATgg > 1:873822/1‑251 (MQ=255) tAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAAc < 1:310926/251‑1 (MQ=255) ggCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACAt < 1:118598/225‑1 (MQ=255) cAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACAtt > 1:75241/1‑250 (MQ=255) cAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAgcg < 1:600686/210‑1 (MQ=255) aTCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTg > 1:828201/1‑177 (MQ=255) aTCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATgg < 1:786914/219‑1 (MQ=255) tCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGAcg > 1:503939/1‑250 (MQ=255) ccTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTcc < 1:836370/244‑1 (MQ=255) cTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAgcgc > 1:558616/1‑206 (MQ=255) tcaCCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGAc < 1:513411/251‑1 (MQ=255) caCCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACt < 1:590885/251‑1 (MQ=255) cGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCg < 1:245744/251‑1 (MQ=255) gCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAAc > 1:568147/1‑221 (MQ=255) cTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGcc < 1:413915/250‑1 (MQ=255) cATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGAc > 1:828619/1‑212 (MQ=255) cATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGccacc < 1:240517/251‑1 (MQ=255) ttAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGc < 1:278868/251‑1 (MQ=255) gTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata > 1:517419/1‑192 (MQ=255) tGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAg > 1:294611/1‑251 (MQ=255) ttCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata > 1:95833/1‑185 (MQ=255) tcctccGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata > 1:354141/1‑184 (MQ=255) tcctccGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACa < 1:115960/190‑1 (MQ=255) tctTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGAt > 1:362860/1‑251 (MQ=255) tctTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGAt > 1:165968/1‑251 (MQ=255) ctTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGAtt < 1:137410/251‑1 (MQ=255) cTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACa < 1:303850/251‑1 (MQ=255) cAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACaa < 1:211067/250‑1 (MQ=255) gcgcCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAAc < 1:346184/248‑1 (MQ=255) gcgcCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAAc < 1:541625/248‑1 (MQ=255) gcgcCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAAc < 1:520952/248‑1 (MQ=255) gcgcCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTgg > 1:805437/1‑251 (MQ=255) ccATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACaa < 1:76087/244‑1 (MQ=255) aTTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGAc < 1:143302/156‑1 (MQ=255) aTTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGa > 1:658996/1‑173 (MQ=255) aTTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACt < 1:657100/186‑1 (MQ=255) aTTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGt > 1:866397/1‑251 (MQ=255) aTTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGt > 1:584856/1‑251 (MQ=255) gggCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTgatc > 1:559208/1‑248 (MQ=255) aaagtgaaagtgACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAAc < 1:894038/251‑1 (MQ=255) aagtgaaagtgaCAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACg > 1:511913/1‑251 (MQ=255) gaCAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAAc < 1:407855/201‑1 (MQ=255) cATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATgg > 1:97501/1‑117 (MQ=255) ggCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:63694/121‑1 (MQ=255) ggCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGata < 1:93037/121‑1 (MQ=255) aaaCAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTcc < 1:460506/135‑1 (MQ=255) aaaCAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCg < 1:7103/137‑1 (MQ=255) aaCAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAAGGGGCGCGCACATCCCTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGa < 1:388540/251‑1 (MQ=255) gCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGaa > 1:473369/1‑248 (MQ=255) aTTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAAc < 1:664492/230‑1 (MQ=255) ccGACGTCTTAGAAAAAAGGGGCGCGCACATCACTGGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTggag < 1:342994/251‑1 (MQ=255) cGACGTCTTAGAAAAATTGGGCGCGCACACCACTTGGGGCAAGGCTTCCATTAAGGCGAATCAAGCCCCGTTACATGGTGTGGATATGGACATAACCCACATTCCCGTCGCCGCCATGACTATCGCAACCACCGCCCTTTTTGCGAAAGGCGAAACCGTGATTCGTAACATTTAAACCTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTggagg < 1:561124/251‑1 (MQ=255) tAGAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGa > 1:39896/1‑82 (MQ=255) gAAAAAATGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGgtg > 1:750677/1‑70 (MQ=255) aaaaaaTGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCGGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTGGAGGAAGGCGAAGAt < 1:318618/251‑1 (MQ=255) tGGGCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTGGAGGAAGGCGAAGATTTTAtt < 1:748020/251‑1 (MQ=255) gggCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTGGAGGAAGGCGAAGATTTTAtt < 1:679523/250‑1 (MQ=255) gggCGCGCACATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTGGAGGAAGGCGAAGATTTTAtt < 1:528039/250‑1 (MQ=255) | ATCACACTCAACATGATGAAAATCTTCGGCGTGAGCGTGGAAAATCAACATTACCAACGCTTCATCGTAAAAGGCAAACAATCCTATCAATCACCCGGCTCATTTTTAGTGGAAGGTGATGCTTCCTCCGCCTCTTATTTCTTAGCGGCAGGCGCCATTAAGGGCAAAGTGAAAGTGACAGGCATCGGCAAAAACAGCATTCAGGGCGATCGTCTGTTTGCCGACGTCTTAGAAAAAATGGGCGCGCGCATCACTTGGGGCGAGGATTTCATTCAAGCGGAACAAGCGCCGTTACATGGTGTGGATATGGACATGAACCACATTCCCGACGCCGCCATGACTATCGCCACCACCGCCCTTTTTGCGGAAGGCGAAACCGTGATTCGTAACATTTACAACTGGCGCGTGAAAGAAACGGATCGTTTAACCGCCATGGCGACGGAACTGCGCAAAGTGGGCGCGGAGGTGGAGGAAGGCGAAGATTTTATT > 1/1779552‑1780040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |