| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,751,357 | C→T | intergenic (+108999/‑30368) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,751,357 | 0 | C | T | 100.0% | 261.1 / NA | 87 | intergenic (+108999/‑30368) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (41/46); total (41/46) | |||||||||||
CCCTTGCAACCATCATGATTGTGTTGTCATTATTACTAGTCATTGCCAGTCAATTTATTGGCAAGAAACACAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTCACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAATATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAACCCAAGGT > 1/1751121‑1751600 | cccTTGCAACCATCATGATTGTGTTGTCATTATTACTAGTCATTGCCAGTCAATTTATTGGCAAGAAACATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTTTACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGAt > 1:822744/1‑251 (MQ=255)cccTTGCAACCATCATGATTGTGTTGTCATTATTACTAGTCATTGCCAGTCAATTTATTGGCAAGAAACATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGAt < 1:875810/251‑1 (MQ=255) catcatGATTGTGTTGTCATTATTACTAGTCATTGCCAGTCAATTTATTGGCAAGAAACATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCa > 1:507269/1‑251 (MQ=255) catcatGATTGTGTTGTCATTATTACTAGTCATTGCCAGTCAATTTATTGGCAAGAAACATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCa > 1:353962/1‑251 (MQ=255) tattaCTAGTCATTGCCAGTCAATTTATTGGCAAGAAACATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATaa > 1:50197/1‑251 (MQ=255) ttaCTAGTCATTGCCAGTCAATTTATTGGCAAGAAACATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAg > 1:460545/1‑251 (MQ=255) aaaCATAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGcc < 1:886257/250‑1 (MQ=255) acataaaGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTa < 1:339399/176‑1 (MQ=255) cataaaGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTa > 1:883979/4‑251 (MQ=255) gACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGc > 1:511887/1‑180 (MQ=255) tCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCAc < 1:29844/184‑1 (MQ=255) aGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAAcaag < 1:64725/210‑1 (MQ=255) aGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGcc > 1:295639/1‑234 (MQ=255) gATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCAcc > 1:307380/1‑250 (MQ=255) atatAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCg > 1:262624/1‑251 (MQ=255) taataaTGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCaa > 1:865336/1‑251 (MQ=255) taataaTGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCaa > 1:268413/1‑251 (MQ=255) ataatGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGac > 1:318721/1‑197 (MQ=255) gCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCt < 1:773652/225‑1 (MQ=255) cTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGc > 1:864047/1‑229 (MQ=255) cTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATAc > 1:217649/1‑250 (MQ=255) cTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATAc < 1:246445/250‑1 (MQ=255) caAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAAcaagca > 1:802038/1‑194 (MQ=255) caAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGAt < 1:394186/243‑1 (MQ=255) aataatTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATc < 1:604772/251‑1 (MQ=255) taatTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCa < 1:851943/227‑1 (MQ=255) taatTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCa < 1:679996/233‑1 (MQ=255) taatTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATAc > 1:191480/1‑241 (MQ=255) taatTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCtt > 1:65493/1‑251 (MQ=255) atTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCAc < 1:576644/157‑1 (MQ=255) atTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTAcc < 1:411034/162‑1 (MQ=255) atTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTa > 1:514251/1‑251 (MQ=255) aGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTgg > 1:766835/1‑251 (MQ=255) aGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTgg > 1:166173/1‑251 (MQ=255) aGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTgg > 1:263530/1‑251 (MQ=255) cacaTACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGAc < 1:53678/251‑1 (MQ=255) cacaTACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGAc < 1:26502/251‑1 (MQ=255) aTACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTAcc > 1:12038/1‑150 (MQ=255) aTACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTacac < 1:535629/242‑1 (MQ=255) aTACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGa > 1:677898/1‑251 (MQ=255) cAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATGCCTGCATTTCATGCAGGTGGTTTTTTGCCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGc < 1:416401/122‑1 (MQ=255) cAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAAt > 1:856286/1‑219 (MQ=255) cAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAAt > 1:534061/1‑219 (MQ=255) cAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCg < 1:576862/226‑1 (MQ=255) cAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGagta < 1:417296/251‑4 (MQ=255) cGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCAc > 1:442701/1‑137 (MQ=255) cGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAc < 1:766203/251‑1 (MQ=255) cGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAc < 1:85013/251‑1 (MQ=255) cGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCATTACACTTGGACTGAGTATGTAc < 1:7628/251‑1 (MQ=255) ccTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAcc < 1:500743/250‑1 (MQ=255) ccTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAcc < 1:79459/250‑1 (MQ=255) ccTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAcc < 1:736909/250‑1 (MQ=255) cTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCgg < 1:404052/251‑1 (MQ=255) aaaTCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCt > 1:261983/1‑187 (MQ=255) aTCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTtctc < 1:752545/251‑1 (MQ=255) gCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAc < 1:205295/231‑1 (MQ=255) tttttATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGc > 1:436958/1‑92 (MQ=255) ttttATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGc > 1:819039/1‑91 (MQ=255) ttttATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAcc > 1:165606/1‑226 (MQ=255) taCCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTacac < 1:44162/203‑1 (MQ=255) taCCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGa > 1:293690/1‑251 (MQ=255) ccTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAc > 1:771651/1‑218 (MQ=255) cTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAAc < 1:419639/251‑1 (MQ=255) tGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAAcc < 1:200195/251‑1 (MQ=255) tGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTac < 1:544304/188‑1 (MQ=255) cAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGTAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAg < 1:642515/250‑1 (MQ=255) cAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTGTTAAAg < 1:415243/250‑1 (MQ=255) cAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGACACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAg < 1:674113/250‑1 (MQ=255) ggtTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGc < 1:539433/147‑1 (MQ=255) tttttACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAg > 1:579225/1‑242 (MQ=255) ccTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGc > 1:846102/1‑141 (MQ=255) ctctTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACtt < 1:620456/75‑1 (MQ=255) ctTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAAt > 1:338551/1‑148 (MQ=255) ctTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAg > 1:490464/1‑230 (MQ=255) ctTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAAt > 1:265233/1‑251 (MQ=255) tttACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATcc < 1:809017/251‑1 (MQ=255) cGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACg < 1:508200/251‑1 (MQ=255) gaACAAACAAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGaaa > 1:182415/1‑250 (MQ=255) aacaaacaAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAAcc < 1:706093/251‑1 (MQ=255) aacaaacaAAAATGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAAcc < 1:634194/251‑1 (MQ=255) aaaaTGAAAAAATTTGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGc < 1:737087/251‑1 (MQ=255) ttGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAAcc < 1:128437/251‑1 (MQ=255) tGCCGGTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAAccc < 1:591530/251‑1 (MQ=255) ggTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAc < 1:159737/148‑1 (MQ=255) ggTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAACCCAAgg > 1:462101/1‑251 (MQ=255) ggTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAACCCAAgg > 1:406077/1‑251 (MQ=255) gTTTATTTACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAACCCAAgg < 1:716056/250‑1 (MQ=255) tttatttaCCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTAc < 1:165141/146‑1 (MQ=255) tttatttaCCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAGTATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAACCCAAGGt < 1:199478/250‑1 (MQ=255) | CCCTTGCAACCATCATGATTGTGTTGTCATTATTACTAGTCATTGCCAGTCAATTTATTGGCAAGAAACACAAAGACATCTAGATATAATAATGCTTCACAAATAATTTAATAGCACATACAATACGCCTTGACGCAAAATCAAGGCGTTTTTTTATACCTGCATTTCATGCAGGTGGTTTTTTACCCCCTCTTTTACGGAGAACAAACAAAAATGAAAAAATTTGCCGGTTTATTCACCGCAAGTATGATCGCTGTTGCACTTACCGGTTGTAACGATAAAGACAACAAGCAAGCGCAAGCAACGCCGGAAGCCCCTAAAGCTGAAGCACCCGCAAATGATACCGTGTATCTTTACACTTGGACTGAATATGTACCGGATGGTCTTCTCGATGAATTCACCAAAGAAACCGGTATTAAAGTGATTGTTTCCAGTCTCGAATCCAACGAAACCATGTATGCAAAAATCAAAACCCAAGGT > 1/1751121‑1751600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |