| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,702,402 | C→A | intergenic (+60044/‑79323) | unknown → / → unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,702,402 | 0 | C | A | 100.0% | 202.1 / NA | 67 | intergenic (+60044/‑79323) | unknown/unknown | tRNA‑Leu‑CAA/tRNA‑Asp‑GTC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (39/28); total (39/28) | |||||||||||
CGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCGGCGCGCCCGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATCTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGATACGGAATTTGCG > 1/1702160‑1702647 | cGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAgtt > 1:556795/1‑251 (MQ=255) gATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAgtttgttt > 1:770728/1‑251 (MQ=255) tCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGtttt > 1:709317/1‑250 (MQ=255) ccGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTc > 1:482220/1‑250 (MQ=255) gTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTc > 1:543343/1‑248 (MQ=255) gTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTc > 1:806905/1‑248 (MQ=255) tCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGa < 1:205527/246‑1 (MQ=255) tCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATtggt > 1:847941/1‑251 (MQ=255) aaaTTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAgg < 1:594602/251‑1 (MQ=255) ggcggcAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGAt > 1:753859/1‑251 (MQ=255) gcAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGtt > 1:40844/1‑250 (MQ=255) cacCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATtggtgg < 1:129479/221‑1 (MQ=255) ccAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTgcgc < 1:427804/251‑1 (MQ=255) cttCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAgcg > 1:42326/2‑192 (MQ=255) cAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATg < 1:835388/223‑1 (MQ=255) cAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATcc < 1:460408/251‑1 (MQ=255) aTACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCaa < 1:183427/251‑1 (MQ=255) aTACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCaa > 1:353191/1‑251 (MQ=255) tACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑c < 1:630018/251‑1 (MQ=255) ccTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGt > 1:722176/1‑238 (MQ=255) cTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑Cg > 1:807027/1‑240 (MQ=255) cccTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGa < 1:878331/198‑1 (MQ=255) cTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCg < 1:79071/251‑1 (MQ=255) gTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTa > 1:427438/1‑251 (MQ=255) aCATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCGTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGGTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATg < 1:840868/251‑1 (MQ=255) tttGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATCAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGAcc < 1:435083/251‑1 (MQ=255) gATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGAt > 1:758745/1‑192 (MQ=255) aTACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCg > 1:418074/1‑249 (MQ=255) aCCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCt > 1:364086/1‑246 (MQ=255) aCCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAg > 1:567281/1‑251 (MQ=255) ccGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGgc < 1:373549/251‑1 (MQ=255) tGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATg < 1:192281/164‑1 (MQ=255) cTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCAt > 1:231379/1‑248 (MQ=255) cacaAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTc > 1:349504/1‑246 (MQ=255) acaAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCg < 1:98879/251‑1 (MQ=255) aacaacGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAAc > 1:500166/1‑246 (MQ=255) caacGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAAt < 1:37712/251‑1 (MQ=255) gCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAgg < 1:867139/120‑1 (MQ=255) gCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGc > 1:323250/1‑250 (MQ=255) tcCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGa > 1:437205/1‑219 (MQ=255) gtCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTaa > 1:183582/1‑251 (MQ=255) gCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCg < 1:710104/205‑1 (MQ=255) gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGc > 1:594951/1‑230 (MQ=255) gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGtt > 1:440010/1‑250 (MQ=255) gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGtt > 1:563893/1‑250 (MQ=255) gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGtt > 1:36794/1‑250 (MQ=255) aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAACCGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAAt < 1:546034/216‑1 (MQ=255) aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga < 1:740229/251‑1 (MQ=255) aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga > 1:1026/1‑251 (MQ=255) aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga < 1:181327/251‑1 (MQ=255) aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTAGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga > 1:475482/1‑251 (MQ=255) taaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGAt > 1:394952/1‑110 (MQ=255) aCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAAt > 1:10060/1‑139 (MQ=255) ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTTAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAAc < 1:10284/200‑1 (MQ=255) ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGAcc > 1:820927/1‑161 (MQ=255) ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGcc > 1:817124/1‑212 (MQ=255) ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCAt > 1:617846/1‑250 (MQ=255) aaGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGc < 1:27885/212‑1 (MQ=255) gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTAt > 1:256989/1‑146 (MQ=255) gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAg > 1:13307/1‑163 (MQ=255) gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGgc < 1:223491/165‑1 (MQ=255) gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCAt > 1:342275/1‑251 (MQ=255) tAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATaa < 1:383298/250‑1 (MQ=255) cAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGc < 1:63751/251‑1 (MQ=255) tGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGAt > 1:710622/1‑251 (MQ=255) agcagcgcgcCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCg < 1:840591/161‑1 (MQ=255) cgcCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGATACGGAATTTGcg < 1:573583/250‑1 (MQ=255) | CGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCGGCGCGCCCGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATCTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGATACGGAATTTGCG > 1/1702160‑1702647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |