Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,702,394 G→A intergenic (+60036/‑79331) unknown → / → unknown tRNA‑Leu‑CAA/tRNA‑Asp‑GTC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,702,3940GA100.0% 186.8 / NA 65intergenic (+60036/‑79331)unknown/unknowntRNA‑Leu‑CAA/tRNA‑Asp‑GTC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (39/26);  total (39/26)

GAGTTAAAAATGCCGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCGGCGCGCCCGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATCTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGAT  >  1/1702147‑1702635
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                  
gAGTTAAAAATGCCGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAgcagcg                                                                                                                                                                                                                                                 >  1:755563/1‑251 (MQ=255)
 aGTTAAAAATGCCGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAgcagcg                                                                                                                                                                                                                                                 >  1:403211/1‑250 (MQ=255)
             cGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAgtt                                                                                                                                                                                                                                    >  1:556795/1‑251 (MQ=255)
                  gATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAgtttgttt                                                                                                                                                                                                                               >  1:770728/1‑251 (MQ=255)
                    tCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGtttt                                                                                                                                                                                                                              >  1:709317/1‑250 (MQ=255)
                     ccGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTc                                                                                                                                                                                                                             >  1:482220/1‑250 (MQ=255)
                       gTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTc                                                                                                                                                                                                                             >  1:543343/1‑248 (MQ=255)
                       gTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTc                                                                                                                                                                                                                             >  1:806905/1‑248 (MQ=255)
                                      tCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGa                                                                                                                                                                                                                <  1:205527/246‑1 (MQ=255)
                                      tCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATtggt                                                                                                                                                                                                           >  1:847941/1‑251 (MQ=255)
                                                    aaaTTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAgg                                                                                                                                                                                             <  1:594602/251‑1 (MQ=255)
                                                             ggcggcAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGAt                                                                                                                                                                                    >  1:753859/1‑251 (MQ=255)
                                                                 gcAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGtt                                                                                                                                                                                 >  1:40844/1‑250 (MQ=255)
                                                                      cacCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATtggtgg                                                                                                                                                                                                         <  1:129479/221‑1 (MQ=255)
                                                                                 ccAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTgcgc                                                                                                                                                                <  1:427804/251‑1 (MQ=255)
                                                                                       cttCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAgcg                                                                                                                                                                                                                     >  1:42326/2‑192 (MQ=255)
                                                                                          cAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATg                                                                                                                                                                                   <  1:835388/223‑1 (MQ=255)
                                                                                          cAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATcc                                                                                                                                                       <  1:460408/251‑1 (MQ=255)
                                                                                            aTACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCaa                                                                                                                                                     <  1:183427/251‑1 (MQ=255)
                                                                                            aTACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCaa                                                                                                                                                     >  1:353191/1‑251 (MQ=255)
                                                                                             tACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑c                                                                                                                                                   <  1:630018/251‑1 (MQ=255)
                                                                                                   ccTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGt                                                                                                                                                           >  1:722176/1‑238 (MQ=255)
                                                                                                         cTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑Cg                                                                                                                                                  >  1:807027/1‑240 (MQ=255)
                                                                                                                 cccTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGa                                                                                                                                                                                     <  1:878331/198‑1 (MQ=255)
                                                                                                                         cTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCg                                                                                                                       <  1:79071/251‑1 (MQ=255)
                                                                                                                           gTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTa                                                                                                                     >  1:427438/1‑251 (MQ=255)
                                                                                                                                 aCATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCGTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGGTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATg                                                                                                               <  1:840868/251‑1 (MQ=255)
                                                                                                                                    tttGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATCAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGAcc                                                                                                            <  1:435083/251‑1 (MQ=255)
                                                                                                                                       gATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGAt                                                                                                                                                                     >  1:758745/1‑192 (MQ=255)
                                                                                                                                        aTACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCg                                                                                                          >  1:418074/1‑249 (MQ=255)
                                                                                                                                             aCCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCt                                                                                                        >  1:364086/1‑246 (MQ=255)
                                                                                                                                             aCCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAg                                                                                                   >  1:567281/1‑251 (MQ=255)
                                                                                                                                               ccGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGgc                                                                                                 <  1:373549/251‑1 (MQ=255)
                                                                                                                                                     tGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATg                                                                                                                                                                                   <  1:192281/164‑1 (MQ=255)
                                                                                                                                                       cTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCAt                                                                                            >  1:231379/1‑248 (MQ=255)
                                                                                                                                                             cacaAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTc                                                                                        >  1:349504/1‑246 (MQ=255)
                                                                                                                                                              acaAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCg                                                                                  <  1:98879/251‑1 (MQ=255)
                                                                                                                                                                                aacaacGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAAc                                                                     >  1:500166/1‑246 (MQ=255)
                                                                                                                                                                                  caacGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAAt                                                              <  1:37712/251‑1 (MQ=255)
                                                                                                                                                                                       gCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAgg                                                                                                                                                                                             <  1:867139/120‑1 (MQ=255)
                                                                                                                                                                                       gCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGc                                                          >  1:323250/1‑250 (MQ=255)
                                                                                                                                                                                               tcCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGa                                                                                 >  1:437205/1‑219 (MQ=255)
                                                                                                                                                                                                    gtCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTaa                                            >  1:183582/1‑251 (MQ=255)
                                                                                                                                                                                                            gCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCg                                                                                  <  1:710104/205‑1 (MQ=255)
                                                                                                                                                                                                                 gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGc                                                    >  1:594951/1‑230 (MQ=255)
                                                                                                                                                                                                                 gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGtt                                >  1:563893/1‑250 (MQ=255)
                                                                                                                                                                                                                 gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGtt                                >  1:440010/1‑250 (MQ=255)
                                                                                                                                                                                                                 gAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGtt                                >  1:36794/1‑250 (MQ=255)
                                                                                                                                                                                                                      aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAACCGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAAt                                                              <  1:546034/216‑1 (MQ=255)
                                                                                                                                                                                                                      aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga                          <  1:740229/251‑1 (MQ=255)
                                                                                                                                                                                                                      aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga                          >  1:1026/1‑251 (MQ=255)
                                                                                                                                                                                                                      aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga                          <  1:181327/251‑1 (MQ=255)
                                                                                                                                                                                                                      aattaaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTAGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAaaga                          >  1:475482/1‑251 (MQ=255)
                                                                                                                                                                                                                         taaCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGAt                                                                                                                                                                     >  1:394952/1‑110 (MQ=255)
                                                                                                                                                                                                                           aCTCCATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAAt                                                                                                                                     >  1:10060/1‑139 (MQ=255)
                                                                                                                                                                                                                              ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTTAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAAc                                                                     <  1:10284/200‑1 (MQ=255)
                                                                                                                                                                                                                              ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGAcc                                                                                                            >  1:820927/1‑161 (MQ=255)
                                                                                                                                                                                                                              ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGcc                                                         >  1:817124/1‑212 (MQ=255)
                                                                                                                                                                                                                              ccATAAAGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCAt                   >  1:617846/1‑250 (MQ=255)
                                                                                                                                                                                                                                   aaGCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGc                                                    <  1:27885/212‑1 (MQ=255)
                                                                                                                                                                                                                                     gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTAt                                                                                                                    >  1:256989/1‑146 (MQ=255)
                                                                                                                                                                                                                                     gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAg                                                                                                   >  1:13307/1‑163 (MQ=255)
                                                                                                                                                                                                                                     gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGgc                                                                                                 <  1:223491/165‑1 (MQ=255)
                                                                                                                                                                                                                                     gCGTAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCAt           >  1:342275/1‑251 (MQ=255)
                                                                                                                                                                                                                                        tAACAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATaa         <  1:383298/250‑1 (MQ=255)
                                                                                                                                                                                                                                           cAATGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGc     <  1:63751/251‑1 (MQ=255)
                                                                                                                                                                                                                                              tGCCGTAGCAGCGCGCCAGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATTTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGAt  >  1:710622/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                  
GAGTTAAAAATGCCGTCAGATCCGTCATATCTTCCGCGTCTTCAGGTTTGATAAATTCACGGGCGGCAGACACCAATTCTTCCAGGTTTTCAATACGCACCTCCCCTTTTTCGCCCTTTTCCTGTTTGTACATTTGATACAACCCGGAATGCTTAATCACAAAATCCGTTTGCGCAAACAACGGCATTTCTTCCGTGTCCCGCTGCAAAGAATTAATTAACTCCATAAAGCGTAACAATGCCGTAGCGGCGCGCCCGGCGAGTTTGTTTTCCTGAAGCGCCAGATTGGTGGCTTGCCATAAGGTGATTTGATGTTCACGGGTAAGATTGCGCAAGGTATCCAA‑CGTGCGATCGCCAATGCCGCGCGGTGGCGTATTAATGACCCGCTCAAAGGCAGCATCGTCCTGTCGATTGGCGATTAACCGTAAATAAGCCAAGGCATCTTTAATTTCCTGCCGTTCAAAGAAGCGCATCCCACCATAAATGCGAT  >  1/1702147‑1702635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑