| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,626,485 | A→C | intergenic (+60346/‑15788) | unknown → / → unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,626,485 | 0 | A | C | 98.8% | 243.0 / ‑2.8 | 81 | intergenic (+60346/‑15788) | unknown/unknown | tRNA‑Asn‑GTT/tRNA‑Leu‑CAA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (44/36); minor base . (1/0); total (45/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
CATTAGCGCCATGCAGGTGGTGGGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCACATTTTTGACCGCACTTATTTACAGAAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATAACGGAA > 1/1626251‑1626726 | catTAGCGCCATGCAGGTGGTGGGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTgcg > 1:587505/1‑249 (MQ=255) aTGCAGGTGGTGGGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGcc < 1:123503/235‑1 (MQ=255) tGCAGGTGGTGGGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAaca > 1:255156/1‑251 (MQ=255) gtggtgGGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTg < 1:679924/250‑1 (MQ=255) tggtggGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGaa < 1:389815/251‑1 (MQ=255) gtggGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAG‑CAAATCCGCCTGCGCTTTAATGCAACACTTGAAAcg > 1:662498/1‑251 (MQ=255) tggGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAAc < 1:158815/250‑1 (MQ=255) ggggTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAAcgt > 1:5449/1‑250 (MQ=255) gggTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAAcgtcg > 1:825447/1‑251 (MQ=255) aTTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGc > 1:200739/1‑230 (MQ=255) aTTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAAt < 1:878885/251‑1 (MQ=255) ttttAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGc > 1:560472/1‑229 (MQ=255) tttAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATAc < 1:248393/251‑1 (MQ=255) tCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTActgc < 1:752067/251‑1 (MQ=255) ccATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAAt > 1:164531/1‑238 (MQ=255) gCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAAc < 1:68022/225‑1 (MQ=255) cATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAAt > 1:315575/1‑250 (MQ=255) cATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAAt > 1:916/1‑250 (MQ=255) aTTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCt < 1:686462/251‑1 (MQ=255) cACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCg > 1:14125/1‑251 (MQ=255) gggTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGc > 1:837125/1‑201 (MQ=255) gggTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCaaa > 1:296305/1‑251 (MQ=255) aTTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAAc < 1:617924/209‑1 (MQ=255) cGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTg < 1:426347/251‑1 (MQ=255) cTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCAc < 1:1788/251‑1 (MQ=255) tATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGt > 1:666599/1‑251 (MQ=255) aTTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGt > 1:901981/1‑250 (MQ=255) aTTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGt > 1:534863/1‑250 (MQ=255) tttAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGc < 1:305678/251‑1 (MQ=255) cGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATa < 1:191845/211‑1 (MQ=255) gATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATAc > 1:856125/1‑190 (MQ=255) gATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTg < 1:677307/239‑1 (MQ=255) aTTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAAt > 1:761039/1‑187 (MQ=255) aTTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGt < 1:381259/251‑1 (MQ=255) atGATCGCCAATGCCCTACTAACTTCAGTCAGCACGAGCATTTTAGTCACGATCATCAGCTATTATATCGACGGCGCAACTGGTCCTTGCATTATCTTTCTACAAGCTACCGCTTTTTTGACCTCGCTTCTTTACAGCAAAATCCGCCTGCTCTGTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGTAGc < 1:195420/251‑1 (MQ=255) ccATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTActgctg > 1:110703/1‑187 (MQ=255) aTTGCACTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAACCGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACtt < 1:432157/251‑1 (MQ=255) gCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCaa < 1:861733/151‑1 (MQ=255) ccTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACg > 1:675891/1‑250 (MQ=255) aCTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAAtt > 1:142289/1‑251 (MQ=255) cGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAAc < 1:767315/251‑1 (MQ=255) cGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAAc < 1:624470/251‑1 (MQ=255) cGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAAc < 1:883276/251‑1 (MQ=255) cGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAAc < 1:658497/251‑1 (MQ=255) ttttAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTActgc > 1:5290/1‑152 (MQ=255) cGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACtt > 1:343650/1‑251 (MQ=255) atcatcAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTc > 1:3815/1‑250 (MQ=255) catcaGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCa > 1:381832/1‑250 (MQ=255) catcaGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCAc < 1:669163/251‑1 (MQ=255) caGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGa > 1:398585/1‑251 (MQ=255) gCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGt < 1:401622/188‑1 (MQ=255) gCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAg > 1:335404/1‑250 (MQ=255) cTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAAccctgtctctattatcctttccgag > 1:771313/1‑227 (MQ=255) cTATTATATCGACGGCGCAACCGGTCCTTGCATTATCCTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAg < 1:894276/249‑1 (MQ=255) attatATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCAt > 1:382243/1‑251 (MQ=255) tataTCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCt > 1:748177/1‑140 (MQ=255) tatCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGc < 1:860111/251‑1 (MQ=255) cGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGt < 1:225645/250‑1 (MQ=255) gcgcAACCGGTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTg > 1:246832/1‑250 (MQ=255) gTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATgg < 1:356085/163‑1 (MQ=255) gTCCTTGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAg > 1:160586/1‑250 (MQ=255) ttGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTActgc < 1:533217/106‑1 (MQ=255) ttGCATTATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGt > 1:106881/1‑251 (MQ=255) ttATCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGc < 1:6911/251‑1 (MQ=255) aTCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATAc > 1:808356/1‑91 (MQ=255) aTCTTGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGC‑AAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGa > 1:96900/1‑251 (MQ=255) tGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGAttt > 1:683433/1‑251 (MQ=255) tGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGAttt > 1:247854/1‑251 (MQ=255) tGCTACAAGCGACCGCATTTTTGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGAttt > 1:789330/1‑251 (MQ=255) tttttGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCAc < 1:651356/163‑1 (MQ=255) tttttGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCaa > 1:330814/1‑251 (MQ=255) ttttGACCGCACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAg < 1:97402/251‑1 (MQ=255) cACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTAc < 1:326436/204‑1 (MQ=255) cACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATaa > 1:154790/1‑250 (MQ=255) cACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATaa > 1:381219/1‑250 (MQ=255) cACTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATaa > 1:563172/1‑250 (MQ=255) cTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCa < 1:882934/177‑1 (MQ=255) cTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATAACgg < 1:138045/251‑1 (MQ=255) cTTATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATAACgg > 1:561344/1‑251 (MQ=255) tATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTc > 1:651338/1‑77 (MQ=255) tATTTACAGCAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATAACGGaa > 1:483683/1‑251 (MQ=255) | CATTAGCGCCATGCAGGTGGTGGGGGTTATTTTAGTAGTCGCCATGCTCATTTCACCGGGTATTACCGCCTTTATTTTAACCAAGCGATTTGATTATATGATCGCCATTGCCCTAATAACTTCAGTCAGCACGAGCATTTTAGGCACGATCATCAGCTATTATATCGACGGCGCAACCGGTCCTTGCATTATCTTGCTACAAGCGACCACATTTTTGACCGCACTTATTTACAGAAAAATCCGCCTGCGCTTTAATGCAACACTTGAAACGTCGTAAATACTTTACTGCTGAGATAATCTTCCGCAAAAACCTGTTGCACCGTCGCCGTGCGCGGACCATGGTGCAGCCAGTCACTTAACGCCTGAATTTGCACCTCAGAACCGATGGCTACCACTTCCACGGAGCCATCAGCAAGGTTGCGTACAAAGCCCGTCACGCCGATTTTTGTTGCCTGTTGCCAAGTGAAATAACGGAA > 1/1626251‑1626726 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |