Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,608,890 C→T intergenic (+42751/‑33383) unknown → / → unknown tRNA‑Asn‑GTT/tRNA‑Leu‑CAA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,608,8900CT100.0% 214.5 / NA 72intergenic (+42751/‑33383)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Leu‑CAA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (41/31);  total (41/31)

TTAAAAACCAAACGGGCGGATATAGGTCGAGATCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTCCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGTCGGCTACAAATTCTAGTTCATAATAATTACTTCA  >  1/1608643‑1609134
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                    
ttAAAAACCAAACGGGCGGATATAGGTCGAGATCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCg                                                                                                                                                                                                                                                   <  1:816735/251‑1 (MQ=255)
                  gATATAGGTCGAGATCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTc                                                                                                                                                                                                                                          >  1:142347/1‑242 (MQ=255)
                  gATATAGGTCGAGATCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTa                                                                                                                                                                                                                                 >  1:883614/1‑251 (MQ=255)
                  gATATAGGTCGAGATCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTa                                                                                                                                                                                                                                 >  1:863766/1‑251 (MQ=255)
                               aTCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGacacac                                                                                                                                                                                                                     >  1:538092/1‑250 (MQ=255)
                               aTCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGacacac                                                                                                                                                                                                                     >  1:586947/1‑250 (MQ=255)
                                tCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACAccc                                                                                                                                                                                                                   <  1:694194/251‑1 (MQ=255)
                                              aaTTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACagtag                                                                                                                                                                                                      <  1:696527/250‑1 (MQ=255)
                                              aaTTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACagtag                                                                                                                                                                                                      <  1:300878/250‑1 (MQ=255)
                                                  aGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTAtt                                                                                                                                                                                                  >  1:793800/1‑250 (MQ=255)
                                                  aGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTAtt                                                                                                                                                                                                  >  1:305265/1‑250 (MQ=255)
                                                   gTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGacac                                                                                                                                                                                                                       >  1:846522/1‑228 (MQ=255)
                                                             aTGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGAc                                                                                                                                                                                                           >  1:307716/1‑230 (MQ=255)
                                                               ggTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACagtag                                                                                                                                                                                                      >  1:649219/1‑233 (MQ=255)
                                                               ggTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGa                                                                                                                                                                                     >  1:243049/1‑250 (MQ=255)
                                                                  aaaTTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCAt                                                                                                                                                                                 <  1:811268/251‑1 (MQ=255)
                                                                     ttacttacCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATc                                                                                                                                                                                                                                     <  1:182834/196‑1 (MQ=255)
                                                                     ttacttacCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAAc                                                                                                                                                                                        >  1:602465/1‑241 (MQ=255)
                                                                     ttacttacCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTAc                                                                                                                                                                              <  1:398182/251‑1 (MQ=255)
                                                                             ccGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATc                                                                                                                                                                      <  1:344682/251‑1 (MQ=255)
                                                                                cAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATcaca                                                                                                                                                                   >  1:470711/1‑251 (MQ=255)
                                                                                  gagaAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCg                                                                                                                                                                                                                                                   >  1:344308/1‑169 (MQ=255)
                                                                                  gagaAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATggg                                                                                                                                                                                                             <  1:330737/207‑1 (MQ=255)
                                                                                  gagaAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCg                                                                                                                                                                                                >  1:618460/1‑220 (MQ=255)
                                                                                  gagaAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGt                                                                                                                                                                 >  1:184651/1‑251 (MQ=255)
                                                                                     aaaTGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtat                                                                                                                                                               <  1:21562/250‑1 (MQ=255)
                                                                                            gAACAAAGTCAATAGTTCTACAGAAGACTGGATTCACCGCTTCGGCTTGGATATGGCCATCCCCGATTACAACATCACTTGGTCAAACAAATTGCATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGCATTTATTTg                                                                                                                                                        >  1:811445/1‑250 (MQ=255)
                                                                                                  aGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATggg                                                                                                                                                                                                             <  1:787950/191‑1 (MQ=255)
                                                                                                        tAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATa                                                                                                                                            >  1:759511/1‑250 (MQ=255)
                                                                                                           ttCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTa                                                                                                                                         <  1:341469/250‑1 (MQ=255)
                                                                                                             cTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtatttatt                                                                                                                                                          <  1:399411/231‑1 (MQ=255)
                                                                                                               aCAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTc                                                                                                                                                                                                 <  1:894319/190‑1 (MQ=255)
                                                                                                               aCAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtattta                                                                                                                                                            >  1:768702/1‑227 (MQ=255)
                                                                                                               aCAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGt                                                                                                                                    >  1:686080/1‑251 (MQ=255)
                                                                                                                    agaCTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATg                                                                                                                                     <  1:881904/245‑1 (MQ=255)
                                                                                                                      aCTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtatttatt                                                                                                                                                          <  1:353234/222‑1 (MQ=255)
                                                                                                                                  gCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTaaa                                                                                                                 >  1:769773/1‑251 (MQ=255)
                                                                                                                                       ggCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtat                                                                                                                                                               >  1:90716/1‑200 (MQ=255)
                                                                                                                                            ggATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGt                                                                                                                                    >  1:698491/1‑222 (MQ=255)
                                                                                                                                            ggATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATtaaat                                                                                                                             >  1:38957/1‑229 (MQ=255)
                                                                                                                                             gATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGAc                                                                                                                                                                                                           >  1:299519/1‑150 (MQ=255)
                                                                                                                                             gATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGt                                                                                                      >  1:653272/1‑251 (MQ=255)
                                                                                                                                                      aTCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATc                                                                                                                                                                                                                                     <  1:676615/115‑1 (MQ=255)
                                                                                                                                                            gATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGt                                                                                                                                    >  1:267169/1‑206 (MQ=255)
                                                                                                                                                              ttACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGAc                                                                                                                                                                                                           >  1:794624/1‑133 (MQ=255)
                                                                                                                                                                 caacaTCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTc                                                                                                                                                                                                 <  1:316541/140‑1 (MQ=255)
                                                                                                                                                                       cACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtat                                                                                                                                                               <  1:259486/168‑1 (MQ=255)
                                                                                                                                                                           tGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACgg                                                                        >  1:829886/1‑251 (MQ=255)
                                                                                                                                                                            ggTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtatttatt                                                                                                                                                          >  1:380087/1‑168 (MQ=255)
                                                                                                                                                                             gTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATtaaat                                                                                                                             <  1:149710/196‑1 (MQ=255)
                                                                                                                                                                                   caaaTTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTaca                                                                <  1:851546/251‑1 (MQ=255)
                                                                                                                                                                                    aaaTTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTacac                                                               <  1:342489/251‑1 (MQ=255)
                                                                                                                                                                                    aaaTTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTacac                                                               <  1:784416/251‑1 (MQ=255)
                                                                                                                                                                                    aaaTTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTacac                                                               <  1:497810/251‑1 (MQ=255)
                                                                                                                                                                                       ttGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGcc                                                            <  1:212435/251‑1 (MQ=255)
                                                                                                                                                                                       ttGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGcc                                                            <  1:353564/251‑1 (MQ=255)
                                                                                                                                                                                       ttGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGc                                                             >  1:194197/1‑250 (MQ=255)
                                                                                                                                                                                         gTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGCCGGAATTTTCCGATATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGc                                                                                                                                                       <  1:77796/158‑1 (MQ=255)
                                                                                                                                                                                         gTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtatttatt                                                                                                                                                          >  1:118874/1‑155 (MQ=255)
                                                                                                                                                                                         gTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtatttatt                                                                                                                                                          >  1:191109/1‑155 (MQ=255)
                                                                                                                                                                                         gTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCg                                                          >  1:15203/1‑251 (MQ=255)
                                                                                                                                                                                         gTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCg                                                          >  1:294151/1‑251 (MQ=255)
                                                                                                                                                                                           atataAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATAc                                                                                                                                           <  1:188439/168‑1 (MQ=255)
                                                                                                                                                                                                   gCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGAc                                                                                                                                                                                                           >  1:686265/1‑96 (MQ=255)
                                                                                                                                                                                                        gATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTa                                                                                                                                         <  1:455105/157‑1 (MQ=255)
                                                                                                                                                                                                                gTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtattta                                                                                                                                                            >  1:395752/1‑130 (MQ=255)
                                                                                                                                                                                                                gTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGt                                    >  1:329964/1‑250 (MQ=255)
                                                                                                                                                                                                                      aCGTTTTGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGtatttatt                                                                                                                                                          >  1:624600/1‑126 (MQ=255)
                                                                                                                                                                                                                            tGGAAGGTGATTTTAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGTCGGCTACAAATTc                       <  1:704782/251‑1 (MQ=255)
                                                                                                                                                                                                                                         tAACGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGTCGGCTACAAATTCTAGTTCAtaataa          >  1:148479/1‑251 (MQ=255)
                                                                                                                                                                                                                                          aaCGACGGAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGAAAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGTCGGCTACAAATTCTAGTTCATaataat         <  1:374924/251‑1 (MQ=255)
                                                                                                                                                                                                                                                 gAATTTTCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGTCGGCTACAAATTCTAGTTCATAATAATTACTTCa  >  1:714224/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                    
TTAAAAACCAAACGGGCGGATATAGGTCGAGATCTTGATCCCAATGAATTAGTTTATCTCGATGGTAAATTACTTACCCGCAGAGAAATGCTGAACAAAGTCAATAGTTCTACAGAAGACTGGATTGCCCGCTTCGGCTTGGATATGGCAATCCCCGATTACAACATCACTTGGTCAAACAAATTGTATATAAAAGCACCGATTCGCAGTTATGACGTTTTGGAAGGTGATTTTAACGACGGAATTTCCCGTTATCGTTCTTATCACTACGGCCGACACACCCAATGGGACAGTAGTATTCGTTGGCAACCGACCATTACCGGTAATCACAGTATTTATTTGCAAGTTGACATACTAAATGTATTAAATAAAACCCGTAAATCAAAAACCGTAAAACCAATTTCAAGTAACGATGAATACGGTATTTACACGCCCGGCCGCGAGTTTTGGCTGGAAGTCGGCTACAAATTCTAGTTCATAATAATTACTTCA  >  1/1608643‑1609134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑