Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,605,957 A→G intergenic (+39818/‑36316) unknown → / → unknown tRNA‑Asn‑GTT/tRNA‑Leu‑CAA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,605,9570AG100.0% 233.1 / NA 77intergenic (+39818/‑36316)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Leu‑CAA
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (38/39);  total (38/39)

TTTCCTCTAATTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAAGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCGAATTGTTTTTCCGCCACGGCAAAATTGGTTTCAATCGC  >  1/1605713‑1606196
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                               
tttCCGCTAATTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATc                                                                                                                                                                                                                                           <  1:200102/251‑1 (MQ=255)
  tccgctAATTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCaa                                                                                                                                                                                                                                         <  1:74830/247‑1 (MQ=255)
  tccgctAATTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCaa                                                                                                                                                                                                                                         <  1:200706/247‑1 (MQ=255)
   ccgctAATTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAAt                                                                                                                                                                                                                                        <  1:208962/248‑1 (MQ=255)
        aaTTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATAcgcg                                                                                                                                                                                                                                   <  1:564507/251‑1 (MQ=255)
          tttGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGat                                                                                                                                                                                                                                 <  1:342214/251‑1 (MQ=255)
                          tGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGt                                                                                                                                                                                                                 >  1:615679/1‑251 (MQ=255)
                               aaaTTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATAc                                                                                                                                                                                                                                      <  1:757460/225‑1 (MQ=255)
                                         tAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATa                                                                                                                                                                                                  >  1:103112/1‑251 (MQ=255)
                                              aaaCAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAAtgc                                                                                                                                                                                             <  1:75199/251‑1 (MQ=255)
                                              aaaCAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAAtgc                                                                                                                                                                                             <  1:78997/251‑1 (MQ=255)
                                                                  cGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGtt                                                                                                                                                                         >  1:612526/1‑251 (MQ=255)
                                                                       cAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAcc                                                                                                                                                                    <  1:12679/251‑1 (MQ=255)
                                                                        aaCGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAccc                                                                                                                                                                   <  1:179206/251‑1 (MQ=255)
                                                                        aaCGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAccc                                                                                                                                                                   <  1:161575/251‑1 (MQ=255)
                                                                        aaCGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAccc                                                                                                                                                                   <  1:637701/251‑1 (MQ=255)
                                                                                         cGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGat                                                                                                                                                                                                                                 <  1:555832/172‑1 (MQ=255)
                                                                                         cGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCtt                                                                                                                                                   >  1:519940/1‑250 (MQ=255)
                                                                                           cTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAAtgc                                                                                                                                                                                             >  1:53051/1‑206 (MQ=255)
                                                                                           cTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGt                                                                                                                                                >  1:174862/1‑251 (MQ=255)
                                                                                             tATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTaa                                                                                                                                              <  1:714733/251‑1 (MQ=255)
                                                                                              aTGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAg                                                                                                                                             >  1:721526/1‑251 (MQ=255)
                                                                                                gCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAggg                                                                                                                                           >  1:597809/1‑251 (MQ=255)
                                                                                                          ttGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGAt                                                                                                                                 <  1:260481/251‑1 (MQ=255)
                                                                                                          ttGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGAt                                                                                                                                 <  1:543966/251‑1 (MQ=255)
                                                                                                            gCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGat                                                                                                                                                                                                                                 >  1:455506/1‑153 (MQ=255)
                                                                                                            gCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGAtt                                                                                                                                >  1:267133/1‑250 (MQ=255)
                                                                                                             cAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTc                                                                                                                               <  1:526222/250‑1 (MQ=255)
                                                                                                             cAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTc                                                                                                                               <  1:730216/250‑1 (MQ=255)
                                                                                                                   aCAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTa                                                                                                                        >  1:60477/1‑251 (MQ=255)
                                                                                                                      aTGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAAt                                                                                                                     <  1:68148/251‑1 (MQ=255)
                                                                                                                      aTGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAAt                                                                                                                     >  1:104490/1‑251 (MQ=255)
                                                                                                                      aTGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAAt                                                                                                                     <  1:504064/251‑1 (MQ=255)
                                                                                                                      aTGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAAt                                                                                                                     >  1:38939/1‑251 (MQ=255)
                                                                                                                        gTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAAt                                                                                                                     >  1:357956/1‑249 (MQ=255)
                                                                                                                             ccTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGTGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGc                                                                                                              <  1:748889/250‑1 (MQ=255)
                                                                                                                                    ccAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTc                                                                                                        <  1:269430/250‑1 (MQ=255)
                                                                                                                                    ccAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTc                                                                                                        <  1:785457/250‑1 (MQ=255)
                                                                                                                                        tACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCgg                                                                                                   >  1:289266/1‑251 (MQ=255)
                                                                                                                                         aCCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAAtgctg                                                                                                                                                                                           >  1:233421/1‑162 (MQ=255)
                                                                                                                                         aCCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAccc                                                                                                                                                                   >  1:494603/1‑186 (MQ=255)
                                                                                                                                         aCCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAcc                                                                                                                                                                    >  1:221819/1‑185 (MQ=255)
                                                                                                                                         aCCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGt                                                                                                  >  1:414323/1‑251 (MQ=255)
                                                                                                                                         aCCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGt                                                                                                  <  1:507626/251‑1 (MQ=255)
                                                                                                                                         aCCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGt                                                                                                  >  1:90114/1‑251 (MQ=255)
                                                                                                                                          ccTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAcc                                                                                                                                                                    >  1:508456/1‑184 (MQ=255)
                                                                                                                                          ccTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAgg                                                                                                                                            <  1:523678/208‑1 (MQ=255)
                                                                                                                                          ccTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGt                                                                                                  >  1:541151/1‑250 (MQ=255)
                                                                                                                                             tAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGat                                                                                                                                                                                                                                 <  1:97801/120‑1 (MQ=255)
                                                                                                                                             tAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAAc                                                                                              <  1:702491/251‑1 (MQ=255)
                                                                                                                                             tAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAAc                                                                                              <  1:359104/251‑1 (MQ=255)
                                                                                                                                                  gCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTc                                                                                                                                                                                                                            >  1:271111/1‑120 (MQ=255)
                                                                                                                                                   cATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGAt                                                                                        >  1:483892/1‑251 (MQ=255)
                                                                                                                                                           aaCATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCGTGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATAc                                                                                <  1:638206/251‑1 (MQ=255)
                                                                                                                                                             cATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAAtgctgc                                                                                                                                                                                          <  1:521245/143‑1 (MQ=255)
                                                                                                                                                             cATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCg                                                                              >  1:149476/1‑251 (MQ=255)
                                                                                                                                                             cATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCg                                                                              >  1:522671/1‑251 (MQ=255)
                                                                                                                                                                        ggCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATa                                                                                       >  1:550844/1‑231 (MQ=255)
                                                                                                                                                                        ggCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGcgcg                                                                   >  1:211877/1‑251 (MQ=255)
                                                                                                                                                                        ggCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGcgcg                                                                   >  1:543863/1‑251 (MQ=255)
                                                                                                                                                                              cGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTaa                                                              >  1:180317/1‑250 (MQ=255)
                                                                                                                                                                                  aTGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGt                                                                                                  >  1:518204/1‑210 (MQ=255)
                                                                                                                                                                                    gCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCa                                                                                    <  1:885396/222‑1 (MQ=255)
                                                                                                                                                                                       aTGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCAt                                                    >  1:827561/1‑251 (MQ=255)
                                                                                                                                                                                         gCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATaa                                                  >  1:505947/1‑251 (MQ=255)
                                                                                                                                                                                          cTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAAtg                                                                                                                                                                                              <  1:267464/110‑1 (MQ=255)
                                                                                                                                                                                            tttGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGc                                               <  1:317407/251‑1 (MQ=255)
                                                                                                                                                                                                   ccTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTAcc                                         <  1:545755/250‑1 (MQ=255)
                                                                                                                                                                                                   ccTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGGAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCg                                        <  1:440511/251‑1 (MQ=255)
                                                                                                                                                                                                                   cTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCGAATTGTTTTTCCGCCa                        >  1:90019/1‑251 (MQ=255)
                                                                                                                                                                                                                            aTCGCCTTTTGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCGAATTGTTTTTCCGCCACGGCAAAAt               <  1:237991/251‑1 (MQ=255)
                                                                                                                                                                                                                                  ttttGGTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCGAATTGTTTTTCCGCCACGGCAAAATTGGttt         <  1:357008/251‑1 (MQ=255)
                                                                                                                                                                                                                                       gTCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTAc                                          >  1:588598/1‑213 (MQ=255)
                                                                                                                                                                                                                                        tCCCTGAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGc                                               <  1:748980/207‑1 (MQ=255)
                                                                                                                                                                                                                                             gAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTa                                                                                                                                                                        >  1:289553/1‑81 (MQ=255)
                                                                                                                                                                                                                                             gAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAAcc                                                                                                                                                                    >  1:570301/1‑85 (MQ=255)
                                                                                                                                                                                                                                             gAATGGAGGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCGAATTGTTTTTCCGCCACGGCAAAATTGGTTTCAATCGc  >  1:691199/1‑247 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                               
TTTCCTCTAATTTGCCCTCGTTTTCCTGCCAAAATTCATCATAGTTAAACAACAATTTCGCCGAATCGTTCCAACGGTATTTCGCCTGACGCTTATGCGGAATGCCTTGCAAGCGACAATGTAATACTTCCGCCAATACCTTAAACGCATTCACCAACATAAACATCGGGCGCACGCCATGCAATGCTTTTGTTGCCTGACGCACCAAATCCTGCGCTTCATCGCCTTTTGGTCCCTGAATGGAAGCGATCAATACGCGATTATTCGCTAAAAAGGTAAAACCGGCAGAATAAATGCTGCGTTGATTTGCATCTGTTAAACCCATGGCAAAAAAACCTTCGTAAGGGTCGATATGATTCAGCGTTAAATTTAACGCTAACTCATCGGTTAACTGTGATAGCAATACCGGCTGTTGCGCGATTAACGTTTCGCATAACGCCTTACCGAATTGTTTTTCCGCCACGGCAAAATTGGTTTCAATCGC  >  1/1605713‑1606196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑