Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,571,634 G→A intergenic (+5495/‑70639) unknown → / → unknown tRNA‑Asn‑GTT/tRNA‑Leu‑CAA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,571,6340GA100.0% 210.6 / NA 74intergenic (+5495/‑70639)unknown/unknowntRNA‑Asn‑GTT/tRNA‑Leu‑CAA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (38/36);  total (38/36)

AGCCATTACTCAAAAAAATAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCCGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCGCAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGTCGGAATTT  >  1/1571387‑1571875
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                 
aGCCATTACTCAAAAAAATAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACaa                                                                                                                                                                                                                                                >  1:163708/1‑251 (MQ=255)
  ccATTACTCAAAAAAATAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACaaga                                                                                                                                                                                                                                              >  1:792056/1‑251 (MQ=255)
               aaaTAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAAc                                                                                                                                                                                                                                 <  1:299281/251‑1 (MQ=255)
                aaTAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACa                                                                                                                                                                                                                                >  1:221874/1‑251 (MQ=255)
                 aTAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAg                                                                                                                                                                                                                               <  1:366045/251‑1 (MQ=255)
                                         cACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGttt                                                                                                                                                                                                       >  1:771497/1‑251 (MQ=255)
                                                tGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGAt                                                                                                                                                                                                                                    <  1:297291/215‑1 (MQ=255)
                                                      aTCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAAc                                                                                                                                                                                                                                 <  1:18917/212‑1 (MQ=255)
                                                      aTCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAg                                                                                                                                                                                                                               >  1:694613/1‑214 (MQ=255)
                                                      aTCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAAtt                                                                                                                                                                                          >  1:781371/1‑251 (MQ=255)
                                                        ccATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGAt                                                                                                                                                                                                                                    >  1:508889/1‑207 (MQ=255)
                                                        ccATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAAc                                                                                                                                                                                                                                 >  1:52647/1‑210 (MQ=255)
                                                        ccATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAg                                                                                                                                                                                                                               <  1:303492/212‑1 (MQ=255)
                                                        ccATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGcc                                                                                                                                                                                                            <  1:192846/231‑1 (MQ=255)
                                                        ccATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGa                                                                                                                                                                                        >  1:781951/1‑251 (MQ=255)
                                                        ccATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAACTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGa                                                                                                                                                                                        >  1:538808/1‑251 (MQ=255)
                                                                                    gttTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGa                                                                                                                                                                                        >  1:792714/1‑223 (MQ=255)
                                                                                     ttttttGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTg                                                                                                                                                           <  1:151966/251‑1 (MQ=255)
                                                                                      tttttGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCAGTGa                                                                                                                                                          <  1:288487/251‑1 (MQ=255)
                                                                                           gCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCGCCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTg                                                                                                                                                           <  1:32114/245‑1 (MQ=255)
                                                                                           gCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCa                                                                                                                                                     >  1:849777/1‑251 (MQ=255)
                                                                                            cTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGcac                                                                                                                                                                           <  1:231020/228‑1 (MQ=255)
                                                                                                aaTCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGAt                                                                                                                                                <  1:689160/251‑1 (MQ=255)
                                                                                                       cgcAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGa                                                                                                                                          <  1:175953/250‑1 (MQ=255)
                                                                                                         cAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGAcg                                                                                                                                        >  1:345904/1‑250 (MQ=255)
                                                                                                         cAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGAcg                                                                                                                                        >  1:622628/1‑250 (MQ=255)
                                                                                                             tttGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGa                                                                                                                                   <  1:584998/251‑1 (MQ=255)
                                                                                                                        aTTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGat                                                                                                                        >  1:117328/1‑251 (MQ=255)
                                                                                                                        aTTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGa                                                                                                                         <  1:371148/250‑1 (MQ=255)
                                                                                                                          tttATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGa                                                                                                                                   >  1:674290/1‑238 (MQ=255)
                                                                                                                                aaTTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATcc                                                                                                                                                               >  1:290366/1‑204 (MQ=255)
                                                                                                                                     aCCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGcac                                                                                                                                                                           >  1:504140/1‑187 (MQ=255)
                                                                                                                                      cccATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGa                                                                                                                                                          <  1:250744/203‑1 (MQ=255)
                                                                                                                                      cccATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCAccc                                                                                                                <  1:285414/245‑1 (MQ=255)
                                                                                                                                        cATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGcac                                                                                                                                                                           <  1:342487/184‑1 (MQ=255)
                                                                                                                                        cATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGat                                                                                                                        >  1:723238/1‑235 (MQ=255)
                                                                                                                                        cATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCAcc                                                                                                                 <  1:662260/242‑1 (MQ=255)
                                                                                                                                        cATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGaaa                                                                                                        >  1:555717/1‑251 (MQ=255)
                                                                                                                                        cATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGaaa                                                                                                        >  1:802541/1‑251 (MQ=255)
                                                                                                                                                cAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTc                                                                                                 >  1:497340/1‑250 (MQ=255)
                                                                                                                                                         attCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAg                                                                                                     >  1:534158/1‑237 (MQ=255)
                                                                                                                                                          ttCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAg                                                                                      <  1:73227/251‑1 (MQ=255)
                                                                                                                                                                  aCGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATg                                                                              <  1:553723/251‑1 (MQ=255)
                                                                                                                                                                    gAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAg                                                                            >  1:559311/1‑251 (MQ=255)
                                                                                                                                                                     aaaTTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAg                                                                            <  1:900233/250‑1 (MQ=255)
                                                                                                                                                                        ttACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGAt                                                                                                                                                >  1:357947/1‑179 (MQ=255)
                                                                                                                                                                              ttttAAAAGACCTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAg                                                                                      <  1:320948/231‑1 (MQ=255)
                                                                                                                                                                                        ccTCGAACCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTa                                                        >  1:544165/1‑251 (MQ=255)
                                                                                                                                                                                             aaCCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAg                                                                                                                                                        <  1:205678/150‑1 (MQ=255)
                                                                                                                                                                                             aaCCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAAtt                                                    >  1:485125/1‑250 (MQ=255)
                                                                                                                                                                                             aaCCTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATtc                                                   <  1:58852/251‑1 (MQ=255)
                                                                                                                                                                                               ccTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAAt                                                                       <  1:512262/229‑1 (MQ=255)
                                                                                                                                                                                               ccTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATtct                                                  >  1:655289/1‑250 (MQ=255)
                                                                                                                                                                                                cTGTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCggg                                                                                                                                    <  1:431744/167‑1 (MQ=255)
                                                                                                                                                                                                  gTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGttt                                                                                                                                                                                                       <  1:582829/98‑1 (MQ=255)
                                                                                                                                                                                                  gTCCAGCTGCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTcc                                                <  1:782506/249‑1 (MQ=255)
                                                                                                                                                                                                          gCGTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCAcc                                                                                                                 <  1:91249/176‑1 (MQ=255)
                                                                                                                                                                                                            gTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGCAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCCTTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTa                                     >  1:56753/1‑250 (MQ=255)
                                                                                                                                                                                                            gTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAg                                                                                      <  1:259364/201‑1 (MQ=255)
                                                                                                                                                                                                            gTCCTGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTa                                     >  1:736368/1‑250 (MQ=255)
                                                                                                                                                                                                               ctggCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACAcc                                 <  1:765696/249‑1 (MQ=255)
                                                                                                                                                                                                                 ggCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCtt                               >  1:78705/1‑251 (MQ=255)
                                                                                                                                                                                                                  gCATGTACACGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCtt                               >  1:37599/1‑250 (MQ=255)
                                                                                                                                                                                                                         cacGGACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAg                                                                            <  1:807050/198‑1 (MQ=255)
                                                                                                                                                                                                                             gACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGa                                                                                                                                                          >  1:701104/1‑116 (MQ=255)
                                                                                                                                                                                                                             gACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAAt                                                                       <  1:722427/199‑1 (MQ=255)
                                                                                                                                                                                                                             gACACCACCCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGttt                   >  1:747878/1‑251 (MQ=255)
                                                                                                                                                                                                                                 ccaccCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAAt                                                     >  1:649553/1‑213 (MQ=255)
                                                                                                                                                                                                                                 ccaccCGCCCGAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCa                >  1:5048/1‑250 (MQ=255)
                                                                                                                                                                                                                                       gcccgAACCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGt          >  1:894017/1‑250 (MQ=255)
                                                                                                                                                                                                                                            aaCCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGTCGGaa     <  1:5518/250‑1 (MQ=255)
                                                                                                                                                                                                                                            aaCCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGTCGGaa     <  1:511064/250‑1 (MQ=255)
                                                                                                                                                                                                                                            aaCCATCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATCTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGTCGGAAt    <  1:151493/251‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCTTGCACAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGTCGGAAttt  >  1:184347/1‑249 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                 
AGCCATTACTCAAAAAAATAAAACACCTGCCAAAACGACCGCACTTTTTGCCAAATCCATTAAAGTGCGGTTAAAAATTCCGTTGTTTTTTGCTATAATCCCGCGCAATTTTGCTTCCCGATTTTATGAATTAACCCATTATGACAACGAATTATTCCGCCAACGAAATTACCGTTTTAAAAGACCTCGAACCTGTCCAGCTGCGTCCCGGCATGTACACGGACACCACCCGCCCGAACCATCTTGCGCAAGAAGTTATCGATAACAGCGTGGACGAAGCTCTTGCCGGTTTTGCCACCAAAATTGAAGTGATTTTGCACAAAGACCAATCCATTGAAGTCATTGATAACGGACGCGGGATGCCGGTGGATATTCACCCGGTGGAAAAAGTTTCCGGTGTGGAAGTGATCATGAGTAAATTGCACGCCGGCGGTAAATTCTCCAATAAAAACTACACCTTCTCGGGCGGTTTGCACGGGGTCGGAATTT  >  1/1571387‑1571875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑