Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 197,642 C→T intergenic (‑62191/+16055) unknown ← / ← unknown SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1197,6420CT100.0% 222.4 / NA 78intergenic (‑62191/+16055)unknown/unknownSSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (29/49);  total (29/49)

GGTATATGCGTGGATGCCGGTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGCGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGATACTA  >  1/197408‑197871
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                     
ggTATATGCGTGGATGCCGGTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTg                                                                                                                                                                                                                       >  1:392943/1‑251 (MQ=255)
 gTATATGCGTGGATGCCGGTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTg                                                                                                                                                                                                                       <  1:525403/250‑1 (MQ=255)
 gTATATGCGTGGATGCCGGTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGa                                                                                                                                                                                                                      >  1:466681/1‑251 (MQ=255)
                   gTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTg                                                                                                                                                                                                     >  1:786829/1‑250 (MQ=255)
                   gTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTg                                                                                                                                                                                                     >  1:633619/1‑250 (MQ=255)
                                            aTGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGc                                                                                                                                                                                                                              >  1:677477/1‑200 (MQ=255)
                                              gTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGAt                                                                                                                                                                                                               <  1:804116/213‑1 (MQ=255)
                                                      ggCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTg                                                                                                                                                                                                                 >  1:169377/1‑203 (MQ=255)
                                                           ccTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGa                                                                                                                                                              >  1:547818/1‑249 (MQ=255)
                                                            cTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTg                                                                                                                                                                                                                       <  1:293013/191‑1 (MQ=255)
                                                              aTGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGtgtg                                                                                                                                                               <  1:118264/245‑1 (MQ=255)
                                                                   gTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAg                                                                                                                                                      >  1:287097/1‑249 (MQ=255)
                                                                        tCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGc                                                                                                                                                     <  1:641481/245‑1 (MQ=255)
                                                                                caAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAAcgcg                                                                                                                                          >  1:159373/1‑248 (MQ=255)
                                                                                    ccaaccGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGTCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAAc                                                                                                                                   <  1:878423/251‑1 (MQ=255)
                                                                                      aaccGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAAc                                                                                                                                   >  1:654815/1‑249 (MQ=255)
                                                                                                 gATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGt                                                                                                                                                                                                                  >  1:197421/1‑159 (MQ=255)
                                                                                                    aaaTACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAagtag                                                                                                                   <  1:226731/251‑1 (MQ=255)
                                                                                                    aaaTACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAagtag                                                                                                                   <  1:438709/251‑1 (MQ=255)
                                                                                                    aaaTACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAagtag                                                                                                                   >  1:383678/1‑251 (MQ=255)
                                                                                                       tACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGAc                                                                                                                                                             <  1:599903/206‑1 (MQ=255)
                                                                                                          ttACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTAcgcc                                                                                                             <  1:760397/251‑1 (MQ=255)
                                                                                                                      ccGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGaaa                                                                                                                                                                                                                                <  1:433612/124‑1 (MQ=255)
                                                                                                                      ccGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAAc                                                                                                 <  1:820409/251‑1 (MQ=255)
                                                                                                                      ccGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAAc                                                                                                 <  1:30982/251‑1 (MQ=255)
                                                                                                                      ccGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAAc                                                                                                 <  1:580365/251‑1 (MQ=255)
                                                                                                                         tATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCg                                                                                               <  1:856263/250‑1 (MQ=255)
                                                                                                                            gACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCg                                                                                           >  1:602091/1‑251 (MQ=255)
                                                                                                                                 aaaGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTAcgc                                                                                                              <  1:797013/227‑1 (MQ=255)
                                                                                                                                    gAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTAcgcc                                                                                                             <  1:359380/225‑1 (MQ=255)
                                                                                                                                       tgtgGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTGTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATg                                                                                <  1:438126/251‑1 (MQ=255)
                                                                                                                                        gtgGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTcc                                                                                                                          <  1:702906/208‑1 (MQ=255)
                                                                                                                                          ggAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTcc                                                                                                                          <  1:167298/206‑1 (MQ=255)
                                                                                                                                                gatTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAagt                                                                                                                     >  1:691090/1‑205 (MQ=255)
                                                                                                                                                gatTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAAc                                                                                                 >  1:701294/1‑225 (MQ=255)
                                                                                                                                                 atTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGa                                                                       <  1:208726/250‑1 (MQ=255)
                                                                                                                                                     aGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAagt                                                                                                                     <  1:22141/200‑1 (MQ=255)
                                                                                                                                                      gTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCa                                                                 >  1:705470/1‑251 (MQ=255)
                                                                                                                                                       tCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATGGTGAAGGTGATGGGGTGACTGCCGCTGCAAAACAAAAAACGTTAGTTTTAATTGGTGTGACTGATGGGCTGTCGAACGCGCTGAATCCTTATTTCCTAATTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTAcc                                                                  <  1:797848/249‑1 (MQ=255)
                                                                                                                                                         tATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATc                                                              <  1:590088/251‑1 (MQ=255)
                                                                                                                                                          aTTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTg                                                                                                                                                                                                                       <  1:652594/97‑1 (MQ=255)
                                                                                                                                                          aTTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGgtg                                                                                                                                                                 >  1:665331/1‑151 (MQ=255)
                                                                                                                                                          aTTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGgtg                                                                                                                                                                 <  1:405367/151‑1 (MQ=255)
                                                                                                                                                          aTTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTAcgcc                                                                                                             <  1:74982/203‑1 (MQ=255)
                                                                                                                                                                   gATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTcc                                                                                                                          >  1:271141/1‑181 (MQ=255)
                                                                                                                                                                   gATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTaaaa                                                                                                   <  1:532497/204‑1 (MQ=255)
                                                                                                                                                                   gATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTAcc                                                                  <  1:830542/237‑1 (MQ=255)
                                                                                                                                                                   gATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACG‑CCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGgaa                                                   >  1:462897/1‑251 (MQ=255)
                                                                                                                                                                   gATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGCAGTACGCCCGCCCTAAAAAc                                                                                                 >  1:38500/1‑206 (MQ=255)
                                                                                                                                                                     tttATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGgaag                                                  <  1:808531/251‑1 (MQ=255)
                                                                                                                                                                      ttATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAgg                                                                                                                                                                                                                   <  1:267673/89‑1 (MQ=255)
                                                                                                                                                                      ttATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAAc                                                                                                                                   <  1:381511/169‑1 (MQ=255)
                                                                                                                                                                      ttATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCt                                                                                      <  1:144677/214‑1 (MQ=255)
                                                                                                                                                                      ttATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGgaaga                                                 >  1:809054/1‑251 (MQ=255)
                                                                                                                                                                      ttATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGgaaga                                                 >  1:484746/1‑251 (MQ=255)
                                                                                                                                                                          cATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATgg                                             <  1:222805/251‑1 (MQ=255)
                                                                                                                                                                                       aTTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATc                                <  1:647583/251‑1 (MQ=255)
                                                                                                                                                                                       aTTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATc                                <  1:691554/251‑1 (MQ=255)
                                                                                                                                                                                            aCGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGAc                            <  1:298164/250‑1 (MQ=255)
                                                                                                                                                                                               gAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTAc                         >  1:239380/1‑250 (MQ=255)
                                                                                                                                                                                                 aTTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGgtg                                                                                                                                                                 <  1:275490/112‑1 (MQ=255)
                                                                                                                                                                                                 aTTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATgg                                             <  1:337853/228‑1 (MQ=255)
                                                                                                                                                                                                  ttttATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGa                                                                                                                                                                                                                      >  1:829516/1‑58 (MQ=255)
                                                                                                                                                                                                     tATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACt                  <  1:52099/251‑1 (MQ=255)
                                                                                                                                                                                                       ttCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTg                                                                                                                                                                                                                 <  1:146352/58‑1 (MQ=255)
                                                                                                                                                                                                       ttCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATc                                >  1:397285/1‑235 (MQ=255)
                                                                                                                                                                                                        tCCATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGa                                                                       >  1:676959/1‑195 (MQ=255)
                                                                                                                                                                                                         ccATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAac              <  1:497853/251‑1 (MQ=255)
                                                                                                                                                                                                         ccATGATGATGCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCG‑CCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTAcc                                                                  <  1:870559/198‑1 (MQ=255)
                                                                                                                                                                                                           atgatgatgCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAacac            <  1:370206/251‑1 (MQ=255)
                                                                                                                                                                                                           atgatgatgCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAacac            <  1:19469/251‑1 (MQ=255)
                                                                                                                                                                                                              atgatgCGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGgtg                                                                                                                                                                 <  1:176994/99‑1 (MQ=255)
                                                                                                                                                                                                                    cGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGAtac    <  1:718331/250‑1 (MQ=255)
                                                                                                                                                                                                                    cGTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGAtac    <  1:438582/250‑1 (MQ=255)
                                                                                                                                                                                                                     gTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGAtacta  >  1:590561/1‑251 (MQ=255)
                                                                                                                                                                                                                     gTTTTTAACGGATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGAt      >  1:170367/1‑247 (MQ=255)
                                                                                                                                                                                                                               gATTTTGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGAtac    <  1:276372/239‑1 (MQ=255)
                                                                                                                                                                                                                                 ttttGAAGGTGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACt                  >  1:501757/1‑223 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                     
GGTATATGCGTGGATGCCGGTTTTGGCGTTTGACTTGCGCAATCATGTTAAAGAGGCAACCTATGTGGTAGATCACCGCACAAACCAACCGGCAAAAGATAAATACTTACGCCTTTCGCCGTATGACCGAAAGAATGTGGAGATGATTAAGTCTATTTATAATGATTTATCATTCTATGCAAAATTTGACGGAATTTTATTCCATGATGATGCGTTTTTAACGGATTTTGAAGGCGTAGAAAGCCATAGTGAAGGTGATGGCGTGACTGCCGCTGCAAAACAAAAAACGTTAGATTTAATTGGTGTGACTGATGAGCTGACGAACGCGCTGAAACCTTATTTCCTAAGTAGTACGCCCGCCCTAAAAACCGTGCGTAGCTTGCATGCGTCGGTGATTACCAATCCGAAAGCGGAAGAATGGTTTGCACAAAATCTGACTACCTTAACTAAACACTATGATACTA  >  1/197408‑197871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑