| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,478,620 | G→A | intergenic (‑60369/‑12915) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,478,620 | 0 | G | A | 100.0% | 245.5 / NA | 87 | intergenic (‑60369/‑12915) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (45/42); total (45/42) | |||||||||||
TCGTGATAAAGCGTTTTAGCTGTATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGGTTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCACCTTTTTTACCAATCATATCTTTCGCAAAAACCTGTGT > 1/1478376‑1478866 | tCGTGATAAAGCGTTTTAGCTGTATTTGTTGAAAGAATGAAATCTGCATCCATAAATTGTTTCATATTATCCCGTTACACACCGCTATAAGCAGAGAACCCACCATCCACCGGCATGATCACACCATTGACAAAACTTGAATTATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACTAATACGCCCCATTTGCTTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTAc < 1:873129/250‑1 (MQ=255) cGTGATGAAGCGTTTTAGCTGTATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCt < 1:822768/251‑1 (MQ=255) gTGATAAAGCGTTTTAGCTGTATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCtt > 1:133273/1‑251 (MQ=255) tGATAAAGCGTTTTAGCTGTATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTc < 1:215229/251‑1 (MQ=255) gTATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATg > 1:425516/1‑250 (MQ=255) tATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGc < 1:152088/250‑1 (MQ=255) gAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTg < 1:317020/250‑1 (MQ=255) aTCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGc < 1:301660/251‑1 (MQ=255) aaaTTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTg < 1:812910/251‑1 (MQ=255) gTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGAc < 1:65728/232‑1 (MQ=255) tattatCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCt < 1:283062/188‑1 (MQ=255) tattatCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAg < 1:836569/233‑1 (MQ=255) attatCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTAc < 1:547585/251‑1 (MQ=255) cccTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTCATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACACTGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGaa > 1:643394/1‑251 (MQ=255) cccTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGaa > 1:323402/1‑251 (MQ=255) acacacCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGcc > 1:67922/1‑223 (MQ=255) acacacCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGAc > 1:830709/1‑249 (MQ=255) acCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACtt < 1:207627/251‑1 (MQ=255) ccGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACttt > 1:243113/1‑251 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTAcc < 1:157429/168‑1 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGcc > 1:155879/1‑216 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTAc < 1:411101/233‑1 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACaa > 1:351693/1‑235 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGa > 1:328906/1‑238 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAg > 1:7401/1‑251 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAg > 1:665720/1‑251 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAg > 1:278984/1‑251 (MQ=255) gCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAg > 1:287660/1‑251 (MQ=255) tataAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGaa < 1:120942/251‑1 (MQ=255) gCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAAcaacaa > 1:820571/1‑179 (MQ=255) aCCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACaa < 1:601280/221‑1 (MQ=255) aCCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCa > 1:828299/1‑251 (MQ=255) accaTCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGc > 1:712974/1‑250 (MQ=255) ccaTCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGc < 1:382721/245‑1 (MQ=255) ccaTCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCa > 1:273605/1‑251 (MQ=255) cAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACaa > 1:243195/1‑212 (MQ=255) ggCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATgg > 1:36795/1‑199 (MQ=255) ggCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGaa > 1:877822/1‑251 (MQ=255) gCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAg > 1:9708/1‑251 (MQ=255) tGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAg > 1:799095/1‑224 (MQ=255) gATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGaa > 1:738756/1‑220 (MQ=255) gATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGcc > 1:466408/1‑236 (MQ=255) tCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTa > 1:260328/1‑251 (MQ=255) ccATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACtt < 1:414918/208‑1 (MQ=255) ccATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGt < 1:894279/236‑1 (MQ=255) ccATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTg > 1:588580/1‑250 (MQ=255) tGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGc > 1:6256/1‑247 (MQ=255) gACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCAc > 1:655080/1‑146 (MQ=255) aCTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCAc < 1:88064/251‑1 (MQ=255) atTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAg > 1:901397/1‑251 (MQ=255) ttttCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGc < 1:732705/251‑1 (MQ=255) atcaatcaAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCaa < 1:845761/251‑1 (MQ=255) atcaaGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTa < 1:785862/216‑1 (MQ=255) caaGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTg > 1:586403/1‑251 (MQ=255) aGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGAc > 1:9171/1‑168 (MQ=255) gAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACttt < 1:34246/174‑1 (MQ=255) gAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAAttt > 1:567026/1‑245 (MQ=255) tAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCg > 1:579388/1‑197 (MQ=255) aCAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACaa > 1:39356/1‑155 (MQ=255) aCAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGc > 1:713712/1‑220 (MQ=255) aCAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAgtggt > 1:755445/1‑251 (MQ=255) tGCACCAAGTAATTCTTCCGGTTTACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTaa < 1:222222/251‑1 (MQ=255) tGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTaa < 1:277502/251‑1 (MQ=255) cccAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTAGTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAgg < 1:804244/250‑1 (MQ=255) aCCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCTCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAgg < 1:723094/251‑1 (MQ=255) aaGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGAt > 1:294047/1‑104 (MQ=255) aaGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAgg < 1:643249/248‑1 (MQ=255) aaGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCAt > 1:292731/1‑251 (MQ=255) aaTTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCAt < 1:862019/251‑1 (MQ=255) ttcttcCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATAc < 1:449912/251‑1 (MQ=255) ttCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAata < 1:115933/250‑1 (MQ=255) cACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGGGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTTCTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATtg < 1:506193/251‑1 (MQ=255) cACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAaacaac > 1:465601/1‑77 (MQ=255) cACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGTACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATtg < 1:433513/251‑1 (MQ=255) cACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCAt > 1:647241/1‑238 (MQ=255) aaaCGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTgatgat < 1:679635/251‑1 (MQ=255) ccccATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATAtttt > 1:417537/1‑250 (MQ=255) ccATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTgatgat > 1:233541/1‑244 (MQ=255) cATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCAc < 1:301070/251‑1 (MQ=255) aTTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTa < 1:686678/165‑1 (MQ=255) aTTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCAc > 1:223063/1‑250 (MQ=255) ggCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTTCCTTCTGCATCAAACAACAATGCAc < 1:481203/67‑1 (MQ=255) ggCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAAt < 1:337921/194‑1 (MQ=255) ggCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAgg > 1:718729/1‑214 (MQ=255) gCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATaa < 1:580382/185‑1 (MQ=255) ttGGTTAAAATTTTATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCACCTTTTTTAcc < 1:622389/251‑1 (MQ=255) ttttATTCGCGCGAGCGGTTGATTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCACCTTTTTTACCAATCATATCt < 1:344248/251‑1 (MQ=255) gttgattTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCACCTTTTTTACCAATCATATCTTTCGCAAAAACCTgtgt > 1:873627/1‑251 (MQ=255) | TCGTGATAAAGCGTTTTAGCTGTATTTGTTGAAAGAAGGAAATCTTCATCCATAAATTGTTTCATATTATCCCCTTACACACCGCTATAAGCAGAGAACCCACCATCAACCGGCATGATCACACCATTGACAAAACTTGAATAATTTTCATCAATCAAGAATAACAATGCACCAAGTAATTCTTCCGGTTCACCAAAACGCCCCATTGGCGTATTGGTTAAAATTTTATTCGCGCGAGCGGTTGGTTTACCTTCTGCATCAAACAACAATGCACGATTTTGGTTACTGACTAAAAAGCCAGGTGCAATGGCATTACAACGAAGACCTACTTTAGAAAAGTAAACGGCAAGCCATTGCGTGAAGTTACTAATTGCAGCTTTAGCACCGGAATAAGCTGCAATTTTTGTTAGTGGTGTAAAGGCATTCATACTTGAAATATTGATGATATTTGCACCTTTTTTACCAATCATATCTTTCGCAAAAACCTGTGT > 1/1478376‑1478866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |