Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,475,793	G→A	intergenic (‑57542/‑15742)	unknown ← / → unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,475,793	0	G	A	100.0%	167.3 / NA	58	intergenic (‑57542/‑15742)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (22/36);  total (22/36)

GCCTAATGGAAATCAAACCGGATGTTGTTTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGGATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCTTTCAAACGGTTTCTATGGAAGAAGTTTTAAAATGGAATCCTGCCGTTATTTTGGT  >  1/1475553‑1476036                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    gCCTAATGGAAATCAAACCGGATGTTGTTTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTaaa                                                                                                                                                                                                                                           >  1:469270/1‑251 (MQ=255)   cTAATGGAAATCAAACCGGATTTTGTTTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGc                                                                                                                                                                                                                                         <  1:297615/251‑1 (MQ=255)    tAATGGAAATCAAACCGGATGTTGTTTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAATCCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGcc                                                                                                                                                                                                                                        <  1:36853/251‑1 (MQ=255)      aTGGAAATCAAACCGGATGTTGTTTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCca                                                                                                                                                                                                                                       >  1:734509/1‑250 (MQ=255)                        gttgttTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAGATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAAt                                                                                                                                                                                                                    >  1:224439/1‑251 (MQ=255)                              ttCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTgg                                                                                                                                                                                                               >  1:726557/1‑250 (MQ=255)                                        aTTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAGCGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGaattg                                                                                                                                                                                                                                                 <  1:595524/206‑1 (MQ=255)                                        aTTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTg                                                                                                                                                                                                    >  1:150291/1‑251 (MQ=255)                                        aTTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTg                                                                                                                                                                                                    >  1:375026/1‑251 (MQ=255)                                                               gAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAAcg                                                                                                                                                                             >  1:367871/1‑251 (MQ=255)                                                                          ccAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCAc                                                                                                                                                                    <  1:317586/249‑1 (MQ=255)                                                                            aaaTGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTtat                                                                                                                                                                >  1:740512/1‑251 (MQ=255)                                                                                gAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCcgg                                                                                                                                                                                       <  1:256406/224‑1 (MQ=255)                                                                                     tGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCaa                                                                                                                                                        >  1:515601/1‑250 (MQ=255)                                                                                            gATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAAcg                                                                                                                                                                             <  1:728007/222‑1 (MQ=255)                                                                                                      tCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCAc                                                                                                                                                                    <  1:355755/221‑1 (MQ=255)                                                                                                      tCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTa                                                                                                                                      >  1:307314/1‑251 (MQ=255)                                                                                                      tCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTa                                                                                                                                      >  1:403629/1‑251 (MQ=255)                                                                                                           aCGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACgg                                                                                                                                   >  1:864517/1‑249 (MQ=255)                                                                                                           aCGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACgg                                                                                                                                   >  1:437080/1‑249 (MQ=255)                                                                                                           aCGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACgg                                                                                                                                   >  1:241399/1‑249 (MQ=255)                                                                                                                    cgATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAat                                                                                                                        >  1:290956/1‑251 (MQ=255)                                                                                                                      aTAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAatat                                                                                                                      <  1:217403/251‑1 (MQ=255)                                                                                                                      aTAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAatat                                                                                                                      <  1:30398/251‑1 (MQ=255)                                                                                                                      aTAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGAAGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCACCCCGAATCTCGGGACTTACGGCTCGGGCAAatat                                                                                                                      <  1:745042/251‑1 (MQ=255)                                                                                                                           aCCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCgg                                                                                                                 <  1:76274/251‑1 (MQ=255)                                                                                                                                   aaGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGc                                                                                                         <  1:890037/251‑1 (MQ=255)                                                                                                                                   aaGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGc                                                                                                         <  1:39617/251‑1 (MQ=255)                                                                                                                                     gCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTAAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTtat                                                                                                                                                                <  1:171162/194‑1 (MQ=255)                                                                                                                                        aaCTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTGCGGCTCGGGCAAATATACCGGTTTAATGCTGGAg                                                                                                    <  1:526112/251‑1 (MQ=255)                                                                                                                                        aaCTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAg                                                                                                    <  1:555078/251‑1 (MQ=255)                                                                                                                                             aaCCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGc                                                                                               <  1:671379/251‑1 (MQ=255)                                                                                                                                              aCCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTc                                                                                                                                                                                          <  1:367580/159‑1 (MQ=255)                                                                                                                                              aCCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAGCGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCg                                                                                              >  1:446092/1‑251 (MQ=255)                                                                                                                                                       ttGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCatat                                                                                     <  1:32466/251‑1 (MQ=255)                                                                                                                                                          ccGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATaa                                                                                   <  1:61767/250‑1 (MQ=255)                                                                                                                                                          ccGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATaa                                                                                   <  1:310718/250‑1 (MQ=255)                                                                                                                                                           cGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAAtg                                                                                 <  1:28377/251‑1 (MQ=255)                                                                                                                                                              tGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTgg                                                                              <  1:719435/251‑1 (MQ=255)                                                                                                                                                                 aaaCAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGc                                                                                         <  1:89315/237‑1 (MQ=255)                                                                                                                                                                        gCCTACAACGAAGGGTTAAAACGCGTGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGcc                                                                                                                                                                                                                                        <  1:604261/87‑1 (MQ=255)                                                                                                                                                                        gCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTatat                                                                                                                                                              <  1:579355/161‑1 (MQ=255)                                                                                                                                                                        gCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGtt                                                                                                               >  1:294483/1‑208 (MQ=255)                                                                                                                                                                        gCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTgg                                                                              <  1:853990/241‑1 (MQ=255)                                                                                                                                                                        gCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAg                                                                    >  1:761995/1‑251 (MQ=255)                                                                                                                                                                          cTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCg                                                                  >  1:386915/1‑251 (MQ=255)                                                                                                                                                                            aCAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGGAAATATACCGGTTTAATGCTGGAGCATGCggggg                                                                                          <  1:428719/225‑1 (MQ=255)                                                                                                                                                                                    gggTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCg                                                                                              <  1:678792/213‑1 (MQ=255)                                                                                                                                                                                    gggTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATaa                                                                                   <  1:93393/224‑1 (MQ=255)                                                                                                                                                                                    gggTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCtt                                                        >  1:665629/1‑251 (MQ=255)                                                                                                                                                                                      gTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATaa                                                                                   <  1:75899/222‑1 (MQ=255)                                                                                                                                                                                                   aTTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCgggg                                                                                           >  1:236840/1‑201 (MQ=255)                                                                                                                                                                                                   aTTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTggcgg                                                                           <  1:868870/217‑1 (MQ=255)                                                                                                                                                                                                        aaTTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCTTTCAAACGGTTTCTATGgaag                                    <  1:185190/251‑1 (MQ=255)                                                                                                                                                                                                                     gTTTTTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATaa                                                                                   <  1:243406/191‑1 (MQ=255)                                                                                                                                                                                                                     gTTTCTGATAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAg                                                                                                    <  1:426771/174‑1 (MQ=255)                                                                                                                                                                                                                            aTAAAAAAGCGCAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCTTTCAAACGGTTTCTATGGAAGAAGTTTTAAAATGGAATcc                 <  1:268375/250‑1 (MQ=255)                                                                                                                                                                                                                                       cAAGGTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCTTTCAAACGGTTTCTATGGAAGAAGTTTTAAAATGGAATCCTGCCGTTAtttt     <  1:752290/251‑1 (MQ=255)                                                                                                                                                                                                                                          ggTGAGGAATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCTTTCAAACGGGTTCTATGGAAGAAGTTTTAAAATGGAATCCTGCCGTTATTTTggg  >  1:355833/1‑250 (MQ=255)                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                    GCCTAATGGAAATCAAACCGGATGTTGTTTTCGTGACCAATTACGCGCCGAAAGAAATGATTGAAAAAATCAGCCAAATGAACGTGCCGGTGATTGCCATTTCGTTACGCAGCGGCGATAAAACCGAACAAAGCAAACTCAACCCGACCCTTGCCGATGAAAACAATGCCTACAACGAAGGGTTAAAACGCGGGATTGAAATTATTGCCGATGTTTTTGATAAAAAAGCGCAAGGTGAGGGATTGATTAAAGCCACATTCGCCAATCGCGAAATGCTGGCGGCACGCTTGGGCAATATTCCGGCGGAAAAACGCGTACGCACTTATATTGCCAACCCGAATCTCGGGACTTACGGCTCGGGCAAATATACCGGTTTAATGCTGGAGCATGCGGGGGCATATAATGTGGCGGCGGAAAGCGTAAAAGGCTTTCAAACGGTTTCTATGGAAGAAGTTTTAAAATGGAATCCTGCCGTTATTTTGGT  >  1/1475553‑1476036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑