| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,475,047 | T→G | intergenic (‑56796/‑16488) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,475,047 | 0 | T | G | 100.0% | 163.1 / NA | 54 | intergenic (‑56796/‑16488) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (24/30); total (24/30) | |||||||||||
CAACGTGAATATCGCCGCACAATACTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATTTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTATGAAGTTTAAAACGCTACTTGGCGCGCTCTTATTGAG > 1/1474801‑1475292 | cAACGTGAATATCGCCGCACAATACTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATgtctt < 1:641079/251‑1 (MQ=255)cAACGTGAATATCGCCGCACAATACTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATgtctt < 1:522453/251‑1 (MQ=255) tCGCCGCACAATACTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACa > 1:856363/1‑251 (MQ=255) gcACAATACTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACg > 1:184478/1‑251 (MQ=255) cTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAAc > 1:695921/1‑237 (MQ=255) cTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATg > 1:188872/1‑251 (MQ=255) cTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATg > 1:751343/1‑251 (MQ=255) aTCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTc < 1:352418/251‑1 (MQ=255) gTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCtat < 1:335911/250‑1 (MQ=255) ttACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATaa < 1:238324/251‑1 (MQ=255) ttACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCG‑AATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAAc < 1:73519/251‑1 (MQ=255) cgtcATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGAt < 1:332290/251‑1 (MQ=255) cgtcATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGAt < 1:281438/251‑1 (MQ=255) tGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATg < 1:25143/250‑1 (MQ=255) cGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGAt < 1:560298/203‑1 (MQ=255) gAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATc < 1:246056/191‑1 (MQ=255) aTACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAAc > 1:87892/1‑223 (MQ=255) aTACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAAt > 1:526939/1‑251 (MQ=255) tACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAAtt < 1:770624/251‑1 (MQ=255) cACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATcc < 1:677827/238‑1 (MQ=255) ccGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAAc < 1:624628/215‑1 (MQ=255) ccGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCa > 1:848203/1‑251 (MQ=255) gTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTAccc > 1:66447/1‑203 (MQ=255) tGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGATATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAatat < 1:842819/251‑1 (MQ=255) cGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAAtt > 1:70350/1‑251 (MQ=255) ttCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATta > 1:280605/1‑208 (MQ=255) ttCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAatat < 1:546450/221‑1 (MQ=255) ttCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGt < 1:56667/228‑1 (MQ=255) tGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATgtcttc > 1:105207/1‑126 (MQ=255) tGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTaaaaa < 1:60520/251‑1 (MQ=255) cACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTaaaaaa > 1:226325/1‑250 (MQ=255) gtgtTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCt < 1:14830/162‑1 (MQ=255) gtgtTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAatat > 1:503340/1‑210 (MQ=255) gttTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAAc > 1:791593/1‑162 (MQ=255) gttTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGAtttttt > 1:713127/1‑251 (MQ=255) tAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGAt > 1:262182/1‑163 (MQ=255) tatTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTc < 1:48243/190‑1 (MQ=255) tatTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCg > 1:160013/1‑251 (MQ=255) tGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTAccc > 1:201276/1‑136 (MQ=255) gATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAAc < 1:889685/145‑1 (MQ=255) aaaaaGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATgg > 1:652438/1‑118 (MQ=255) gTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGa < 1:140215/136‑1 (MQ=255) gTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGt < 1:792411/249‑1 (MQ=255) ggaaaaacacaatgaatttCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGtaat > 1:344594/17‑250 (MQ=255) tCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGtc < 1:572590/251‑1 (MQ=255) gtgtTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAggg < 1:374840/186‑1 (MQ=255) tttCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACtt < 1:551811/251‑1 (MQ=255) cTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGAt > 1:65650/1‑159 (MQ=255) cTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAACGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTc > 1:287277/1‑236 (MQ=255) aGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTa > 1:361263/1‑251 (MQ=255) cgcCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTATGa < 1:290154/250‑1 (MQ=255) cgcCTAATCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTATGa < 1:546562/250‑1 (MQ=255) aTCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTa < 1:539550/112‑1 (MQ=255) aTCAAAAACGACATATTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAatatat < 1:114727/131‑1 (MQ=255) tatTCGATTCGCAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGa > 1:418735/1‑89 (MQ=255) cAAAATATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTATGAAGTTTAAAACGCTACTTGGCGCGCTCTTAt < 1:507389/250‑1 (MQ=255) aaTATGTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTATGAAGTTTAAAACGCTACTTGGCGCGCTCTTATTGAg < 1:164946/251‑1 (MQ=255) | CAACGTGAATATCGCCGCACAATACTTACAAACCGACCCGAAAATCGGTTACGTCGTCATTGACGTGGAAACGGAAGATACCGCACCGTTATTGGCGAAATTACGCGAAATCGACGGCACCATTCGTGCACGGGTGTTGTTTTAATATTAGTCATGATAAAAAGTGCGGTGGAAATTCATTGTGTTTTTCCACCGCACTTTTTTAGTGCGCCTAATCAAAAACGACATATTCGATTCGCAAAATATTTCTTCTTTCTCAACATCACGTCCTGATGGCAATCGCGTTACCCATTCTATAACAAGATTGCTCCTATGAAATCCTGCTAATTATATTCAAAAATATATAGCGTTTTGATAGAATTCAGGGCGTTTAAAAAACATGATTTTTTATCACCGCACTTTCCCTTTGTTTTAGGTAATAAAGGTCTCTTTCACTTCGATTAAAGGATATTCTATGAAGTTTAAAACGCTACTTGGCGCGCTCTTATTGAG > 1/1474801‑1475292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |