| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,470,907 | T→G | intergenic (‑52656/‑20628) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,470,907 | 0 | T | G | 100.0% | 213.7 / NA | 75 | intergenic (‑52656/‑20628) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (41/34); total (41/34) | |||||||||||
AAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCTCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGAAAAATCGCGCCAAATTATTGGTGGAATTAGCCCATGTGCCGG > 1/1470674‑1471148 | aaaaaaaTCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGt < 1:613733/249‑1 (MQ=255)aaaaaaaTCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGGCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGt < 1:451037/249‑1 (MQ=255) cGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGc > 1:393099/1‑244 (MQ=255) cGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGgaag > 1:351054/1‑251 (MQ=255) cGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGgaag < 1:865862/251‑1 (MQ=255) cTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACgggg > 1:732105/1‑251 (MQ=255) ttATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGTAGCAAAACATTGTATTGCCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGCTTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGAATTGACAGTCCGGAAGAAACgggg > 1:44237/1‑250 (MQ=255) aTCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGAcg > 1:75929/1‑251 (MQ=255) cTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGAcgtt < 1:781115/244‑1 (MQ=255) gttTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGTCAtttt > 1:41581/1‑251 (MQ=255) gttTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCAtttt > 1:404666/1‑251 (MQ=255) aaTGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCACTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAg < 1:717947/251‑1 (MQ=255) aTGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGt < 1:723397/195‑1 (MQ=255) ggCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGaa > 1:646562/1‑223 (MQ=255) gCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATgc < 1:89898/248‑1 (MQ=255) gTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGaaa > 1:412274/1‑251 (MQ=255) gTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATgc < 1:574340/236‑1 (MQ=255) tttttATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACgggg > 1:547966/1‑191 (MQ=255) tttttATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTa > 1:857326/1‑251 (MQ=255) tttttATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTa > 1:175872/1‑251 (MQ=255) cAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcg > 1:517653/1‑251 (MQ=255) cAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcg > 1:733353/1‑251 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGt > 1:600206/1‑152 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGt < 1:840763/152‑1 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTg < 1:568016/189‑1 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAg < 1:824671/207‑1 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCa > 1:218238/1‑243 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:773486/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:768435/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:857042/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:511650/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:789062/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:387575/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:792235/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:70554/1‑250 (MQ=255) gTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcga > 1:669466/1‑250 (MQ=255) taataCGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGAc > 1:134150/1‑154 (MQ=255) gggCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGtt > 1:131136/1‑251 (MQ=255) gggCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGt < 1:299327/250‑1 (MQ=255) tttttCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCggg < 1:267149/244‑1 (MQ=255) tttttCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGt > 1:233327/1‑245 (MQ=255) tttttCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTtggtgg < 1:279916/251‑1 (MQ=255) tttttCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTtggtgg < 1:46400/251‑1 (MQ=255) gCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACATGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTggtggt > 1:211029/1‑242 (MQ=255) cACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTg > 1:684320/1‑251 (MQ=255) ttGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAAc < 1:223981/251‑1 (MQ=255) tGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACg > 1:849703/1‑251 (MQ=255) gaACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGgcgcg > 1:631082/1‑251 (MQ=255) aaacaTGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCgg > 1:372810/1‑251 (MQ=255) acaTGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCgggg < 1:121948/251‑1 (MQ=255) caTGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGt < 1:606649/251‑1 (MQ=255) caTGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGt > 1:474738/1‑251 (MQ=255) cAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTatat < 1:655501/249‑1 (MQ=255) cAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTatat < 1:397696/249‑1 (MQ=255) cAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTatat < 1:23212/249‑1 (MQ=255) cAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTatat < 1:244114/249‑1 (MQ=255) cAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTc < 1:735779/251‑1 (MQ=255) cAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTc < 1:316865/251‑1 (MQ=255) aaaaaaTTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAgcg < 1:345455/158‑1 (MQ=255) tGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCt < 1:89560/251‑1 (MQ=255) aTTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATg > 1:544486/1‑251 (MQ=255) ggCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTggtggt > 1:374054/1‑204 (MQ=255) cGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCgg < 1:473370/250‑1 (MQ=255) cGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCgg < 1:611433/250‑1 (MQ=255) cAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCgggg < 1:691075/220‑1 (MQ=255) ccAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTatat < 1:683442/223‑1 (MQ=255) ggcaaggTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACgg > 1:817396/1‑203 (MQ=255) caaggTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGAcg < 1:813018/251‑1 (MQ=255) ggTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCcgac < 1:285327/166‑1 (MQ=255) ggTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGa > 1:13062/1‑251 (MQ=255) aTGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTatat > 1:8415/1‑204 (MQ=255) tCGGTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGAAAAATCGCGCCAAATTATTGGCGGAATTAGcc < 1:780107/251‑1 (MQ=255) gTTTTGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGAAAAATCGCGCCAAATTATTGGCGGAATTAGCCCAt > 1:720459/1‑251 (MQ=255) tGACGTGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGAAAAATCGCGCCAAATTATTGGCGGAATTAGCCCATGTGc < 1:289273/251‑1 (MQ=255) tGATTGCGCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGAAAAATCGCGCCAAATTATTGGCGGAATTAGCCCATGTGCCgg > 1:739830/1‑249 (MQ=255) | AAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAAGACGAGGCAATGTTCCTCGTCTTTTTTATTGGGCGCAGTTATAATACGGGGCATTTTTCAACCGCACTTGAGAGAACAAACATGAAGCAAAAAATTGTATTGGCGACCGGCAACCAAGGCAAGGTCAGAGAAATGGCGGATGTGTTGGCGGATTTCGGTTTTGACGTGATTGCTCAGACGGATTTGGGTATCGACAGCCCGGAAGAAACGGGGCTGACGTTCGTTGAAAATGCCATTTTAAAAGCGCGTTATGCCGCCGAAAAATCCGGTTTACCTGCCATTGCCGACGATTCCGGGTTGGTGGTTGACGCGTTGAACGGCGCGCCGGGGTTATATTCCGCACGCTATGCCGGCGAAGAGGGCAATGACGCGAAAAATCGCGCCAAATTATTGGTGGAATTAGCCCATGTGCCGG > 1/1470674‑1471148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |