| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,470,489 | G→T | intergenic (‑52238/‑21046) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,470,489 | 0 | G | T | 100.0% | 176.0 / NA | 63 | intergenic (‑52238/‑21046) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (38/25); total (38/25) | |||||||||||
TTTTCTTGATTTTGCGACCGGGATCCCAAAAGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCGGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAA > 1/1470244‑1470733 | ttttCTTGATTTTGCGACCGGGATCCCAAAAGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAAc < 1:711737/251‑1 (MQ=255)ttttCTTGATTTTGCGACCGGGATCCCAAAAGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAAc < 1:485426/251‑1 (MQ=255) tttCTTGATTTTGCGACCGGGATCCCAAAAGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACg > 1:550087/1‑251 (MQ=255) tCCCAAAAGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGa > 1:140061/1‑251 (MQ=255) aaaaGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAatat < 1:264723/251‑1 (MQ=255) cGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAacac < 1:150034/250‑1 (MQ=255) cGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAacac < 1:681419/250‑1 (MQ=255) tttCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGcc > 1:720879/1‑250 (MQ=255) gCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTa > 1:831153/1‑251 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAgg > 1:328714/1‑250 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAgg > 1:408407/1‑250 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc < 1:705/251‑1 (MQ=255) aaGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc < 1:896301/251‑1 (MQ=255) aGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCa > 1:277347/1‑251 (MQ=255) gTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCAt > 1:559355/1‑251 (MQ=255) gTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGGGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTg > 1:307317/1‑244 (MQ=255) ttttgtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAaagcggaagcgg < 1:431931/250‑1 (MQ=255) gtttgtttTAACTTTAGTCAGAAAAGGAATCACTATAAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAAAAAGTGAATATTAACACCGCCAGTGCTGCAGAAAtt < 1:458700/208‑1 (MQ=255) gtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc < 1:211190/222‑1 (MQ=255) gtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGc > 1:297707/1‑230 (MQ=255) gtttTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCggtggg > 1:95623/1‑250 (MQ=255) tttAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGACCCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGc < 1:585417/251‑1 (MQ=255) cTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTGGGCTTCGCTGTTCGTGTTAGGTTCGGGGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTAt < 1:392552/251‑1 (MQ=255) tCAGAAAAGGAATCCCTATGAAAGCAATGAACCATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGACCCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGa < 1:307330/250‑1 (MQ=255) aGGAATCACTATGAAAGCAATGAACCATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTAt < 1:869125/238‑1 (MQ=255) cACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAat > 1:818903/1‑151 (MQ=255) cACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAtt > 1:602078/1‑251 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAg > 1:466289/1‑227 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAttt > 1:249682/1‑250 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAttt > 1:47401/1‑250 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAAttt > 1:380435/1‑250 (MQ=255) cTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGGGAGAAAGTGAATATTAACACCGCCAGTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGGGAAAAACACGGTAAttt > 1:442659/1‑250 (MQ=255) aGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGc > 1:411047/1‑187 (MQ=255) aTGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTggg > 1:468797/1‑250 (MQ=255) tCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAacac > 1:802347/1‑138 (MQ=255) tCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAgcgc < 1:741453/237‑1 (MQ=255) cTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAg > 1:345451/1‑172 (MQ=255) gCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAGGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAg < 1:521201/250‑1 (MQ=255) gCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACCGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGCGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGGGGTGCAGTATCGGGAAAAACACGGTAATTTCAGCTCCGGGGAGCAGTTGCTGGAAg > 1:662299/1‑250 (MQ=255) tCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCa > 1:550810/1‑251 (MQ=255) cTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGa > 1:98025/1‑242 (MQ=255) tGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTGGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGc < 1:339686/251‑1 (MQ=255) gTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGTGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAg < 1:442844/232‑1 (MQ=255) gTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTAt > 1:727664/1‑196 (MQ=255) ttCGTGTTAGGTTCGGTGTTTGCGGTTTCTGCCGTGGCGGCGAAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGAAACGGCAGCGGTCGGTGAGAAAGTAAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCAt < 1:737230/251‑1 (MQ=255) gtgtTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAg > 1:706269/1‑125 (MQ=255) gtTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAg < 1:344941/77‑1 (MQ=255) tGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGaaa > 1:96406/1‑251 (MQ=255) gTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAAt > 1:169252/1‑251 (MQ=255) ttCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAAt > 1:185090/1‑250 (MQ=255) ttCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAAt < 1:846842/250‑1 (MQ=255) gCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGGGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGa > 1:481310/1‑251 (MQ=255) gCGGCTGAACGGGCGGTAAAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATaa < 1:405634/249‑1 (MQ=255) gCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAAt > 1:359199/1‑250 (MQ=255) aacgggcggTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTccc < 1:265864/247‑1 (MQ=255) cggTACAAACGGAGCAGCGGGTTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAgt < 1:57009/251‑1 (MQ=255) gTACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGc < 1:153961/192‑1 (MQ=255) tACAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAgttgt > 1:396418/1‑251 (MQ=255) cAAACGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCt > 1:269059/1‑234 (MQ=255) aaaCGGAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAgttgttgt > 1:719934/1‑251 (MQ=255) gAGCAGCCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTaa > 1:105697/1‑251 (MQ=255) agcCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCa > 1:183111/1‑251 (MQ=255) gcCGGCTGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCAGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCaa > 1:235990/1‑251 (MQ=255) | TTTTCTTGATTTTGCGACCGGGATCCCAAAAGTGCGGTCACTTTCTCGCGCGTTTTTTCGCTTTTCGGCAAAGTATGCCCGTTGATTGATTCAACGTTTGTTTTAACTTTAGTCAGAAAAGGAATCACTATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAAAGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCGGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCAGTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACACGGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTATCGCCTTATAATCTTTTCCCTTTAGTTGTTGTTTTAATGCAA > 1/1470244‑1470733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |