| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,466,718 | A→G | intergenic (‑48467/‑24817) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,466,718 | 0 | A | G | 100.0% | 225.0 / NA | 79 | intergenic (‑48467/‑24817) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (33/46); total (33/46) | |||||||||||
CGGCGGCGCAATTACCGAAAAAACAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCACGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCAGCGAAATTCAAGGAATCTGTTGAGCGC > 1/1466474‑1466952 | cggcggcgCAATTACCGAAAAAACAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGtgtg > 1:545174/1‑251 (MQ=255) gcgcAATTACCGAAAAAACAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGgaaga > 1:411304/1‑251 (MQ=255) gcgcAATTACCGAAAAAACAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGgaag < 1:489711/250‑1 (MQ=255) cAATTACCGAAAAAACAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAAt < 1:782486/250‑1 (MQ=255) aaaaaaCAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACg < 1:368605/251‑1 (MQ=255) aaaaaaCAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACg < 1:860804/251‑1 (MQ=255) aaaaaCAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGt > 1:635636/1‑251 (MQ=255) cGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGc < 1:419968/249‑1 (MQ=255) ctcGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTaa > 1:160169/1‑250 (MQ=255) ctcGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTaa > 1:83508/1‑250 (MQ=255) ctcGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAAc < 1:632363/251‑1 (MQ=255) ctcCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTa > 1:680393/1‑250 (MQ=255) ctcCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTa > 1:494175/1‑250 (MQ=255) ctcCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTAc < 1:297917/251‑1 (MQ=255) ccGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACAt < 1:461008/251‑1 (MQ=255) ccGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACAt < 1:498948/251‑1 (MQ=255) gTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACAt < 1:244682/249‑1 (MQ=255) aaCTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCAttt > 1:184900/1‑250 (MQ=255) cgccgGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGgaag > 1:856785/1‑179 (MQ=255) gCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAAc < 1:527787/250‑1 (MQ=255) cGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTAcgcg > 1:366530/1‑251 (MQ=255) ccAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTAcgcg > 1:872624/1‑249 (MQ=255) cccTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACg > 1:143121/1‑172 (MQ=255) ttgatagcgacggtgcgaatattgccgccACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACt < 1:568916/227‑1 (MQ=255) aTCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGttattt < 1:539067/251‑1 (MQ=255) tCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGttattta < 1:678332/251‑1 (MQ=255) aCGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCg < 1:95361/251‑1 (MQ=255) cGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACAt < 1:542630/166‑1 (MQ=255) ccaccaATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACgcgc > 1:57891/1‑211 (MQ=255) ccaccaATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCg < 1:271297/237‑1 (MQ=255) caATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTgg < 1:771742/251‑1 (MQ=255) gCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACgcgc > 1:395282/1‑203 (MQ=255) aaCGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGa < 1:146672/251‑1 (MQ=255) aaCGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGa < 1:112114/251‑1 (MQ=255) cGACACCGTGCCGCGCTATTTACACAGTGGCACCTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAgg < 1:421459/251‑1 (MQ=255) cGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAgg < 1:136794/251‑1 (MQ=255) acacCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATggg < 1:413146/173‑1 (MQ=255) acacCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAAc > 1:870932/1‑187 (MQ=255) ccGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAAc < 1:259582/250‑1 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGc < 1:337316/188‑1 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGgcgc < 1:11938/222‑1 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGgc > 1:170714/1‑220 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGa > 1:235232/1‑234 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAgg < 1:456753/236‑1 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGAtt > 1:85270/1‑251 (MQ=255) cTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTGATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGAtt > 1:848383/1‑251 (MQ=255) tATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAAc < 1:37458/244‑1 (MQ=255) aTTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACAt > 1:227127/1‑174 (MQ=255) aTTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAgg < 1:867603/234‑1 (MQ=255) aTTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTa > 1:745766/1‑251 (MQ=255) aTTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTCCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTa < 1:406646/176‑1 (MQ=255) aGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACggg > 1:61021/1‑251 (MQ=255) gTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAAc > 1:133026/1‑163 (MQ=255) gTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACt < 1:397143/184‑1 (MQ=255) gTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCg < 1:125005/198‑1 (MQ=255) gTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACgggg > 1:436025/1‑250 (MQ=255) gTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGt > 1:519749/1‑251 (MQ=255) ggTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGt > 1:229957/1‑251 (MQ=255) aaCGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTcc < 1:653007/250‑1 (MQ=255) aaCGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTcc < 1:876412/250‑1 (MQ=255) aaCGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTcc < 1:59448/250‑1 (MQ=255) aaCGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTcc < 1:192357/250‑1 (MQ=255) ccACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCg < 1:155934/177‑1 (MQ=255) ccACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTaaa < 1:67010/212‑1 (MQ=255) ttGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAAc > 1:390888/1‑207 (MQ=255) cACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGcccacc < 1:790980/251‑1 (MQ=255) ccccTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGcccaccc < 1:601600/250‑1 (MQ=255) cccTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCACACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGcccacccg > 1:453686/1‑250 (MQ=255) cTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGcccacccgg > 1:281671/1‑248 (MQ=255) ttCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGcaca > 1:885409/1‑143 (MQ=255) ttCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGCGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTc > 1:884882/1‑229 (MQ=255) aTGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCGGCGAAATTCAAGGa < 1:555292/251‑1 (MQ=255) aTGGACGTTTCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCGGCGAAATTCAAGGa < 1:44526/251‑1 (MQ=255) tttCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATg > 1:806810/1‑168 (MQ=255) tttCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCGGCGAAATTCAAgg < 1:598713/243‑1 (MQ=255) tttCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCGGCGAAATTCAAGGAATCTGt < 1:21433/250‑1 (MQ=255) ttCCCGCCCGAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCGGCGAAATTCAAGGAATCTGTTg < 1:412572/251‑1 (MQ=255) ccccgAATAACTGGCCGCGTGTGGAAGAAGTGTTCAAGCGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAACCCGGTTTATTCCTTTGCACCGCCCACCCGGCGAAATTCAAGGAATCTGTTGAgcgc < 1:186234/250‑1 (MQ=255) cccgAATAACTGGCCGCGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCAc > 1:128902/1‑145 (MQ=255) | CGGCGGCGCAATTACCGAAAAAACAGCGTGAAAATCTCGTAGTCTCCGTGCCAAGCGGCAACTTCGGCAACCTCACCGCCGGCTTAATCGCCAAAACCCTTGGCTTGCCGATCAAACGCTTTATCGCCGCCACCAATGCAAACGACACCGTGCCGCGCTATTTACACAGTGGCAACTGGTCACCGAACGCCACCGTTGCCACCCTTTCCAACGCCATGGACGTTTCCCGCCCGAATAACTGGCCACGTGTGGAAGAATTGTTCAAACGTAACGGCTGGACATTAACCGAATTACATTCCGCCGCCATTTCCGATGGGCAAACGGAAGAAACATTACGCGCAATGCACAAACTCGGTTATTTATGCGAGCCGCACGGCGCGGTGGCGTATGAGGTGCTTAAACAGGATTTACAAACGGGTGAAACCGGTTTATTCCTTTGCACCGCCCACCCAGCGAAATTCAAGGAATCTGTTGAGCGC > 1/1466474‑1466952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |