| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,459,088 | A→G | intergenic (‑40837/‑32447) | unknown ← / → unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,459,088 | 0 | A | G | 100.0% | 185.7 / NA | 61 | intergenic (‑40837/‑32447) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (31/30); total (31/30) | |||||||||||
ATTCTTGGGTGGCACAAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAAGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATGCAATATGAG > 1/1458867‑1459322 | atTCTTGGGTGGCACAAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAAtt > 1:312490/1‑251 (MQ=255)atTCTTGGGTGGCACAAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAAtt > 1:511945/1‑251 (MQ=255) ttCTTGGGTGGCACAAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAAtt > 1:619935/1‑250 (MQ=255) acaAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAG‑ACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCg < 1:147079/251‑1 (MQ=255) caAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCg < 1:385643/251‑1 (MQ=255) tCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAAttt > 1:556438/1‑202 (MQ=255) tgAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATcc > 1:490557/1‑204 (MQ=255) gAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACt < 1:271813/238‑1 (MQ=255) aCATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCaagaag > 1:757494/1‑250 (MQ=255) aCTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTaa > 1:292776/1‑251 (MQ=255) aCTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTaa > 1:399911/1‑251 (MQ=255) aCTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTaa > 1:439834/1‑251 (MQ=255) tGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAAc < 1:589918/251‑1 (MQ=255) ttAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCaag > 1:729221/1‑235 (MQ=255) tGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGt < 1:135103/251‑1 (MQ=255) ttGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCAt < 1:250609/251‑1 (MQ=255) ccACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTgg < 1:122930/251‑1 (MQ=255) ccTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGt < 1:240442/251‑1 (MQ=255) gcgcAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCAt > 1:383872/1‑251 (MQ=255) atatCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGa > 1:68566/1‑251 (MQ=255) atatCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGa > 1:757107/1‑251 (MQ=255) atatCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGa > 1:878502/1‑251 (MQ=255) atCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAAt < 1:40096/251‑1 (MQ=255) cAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATgg > 1:139614/1‑251 (MQ=255) gATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGAAAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAAt > 1:738661/1‑246 (MQ=255) tCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGc < 1:740979/251‑1 (MQ=255) cgcgAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGt < 1:594728/251‑1 (MQ=255) cgAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAg > 1:523657/1‑251 (MQ=255) aaCTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGt > 1:137718/1‑251 (MQ=255) cTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTac < 1:598779/251‑1 (MQ=255) cTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTac < 1:128774/251‑1 (MQ=255) caacaacGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCa > 1:5214/1‑251 (MQ=255) caacGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATAGGAAGCTGGTACAAGTa > 1:280634/1‑228 (MQ=255) aacGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCaa < 1:592942/251‑1 (MQ=255) gATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAg > 1:42620/1‑250 (MQ=255) ttACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCACTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTac < 1:455617/218‑1 (MQ=255) tACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGt < 1:669015/251‑1 (MQ=255) gggCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACACATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTa > 1:847507/1‑250 (MQ=255) gctAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCg > 1:27855/1‑249 (MQ=255) ttATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAAt > 1:232318/1‑235 (MQ=255) gCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGaa < 1:150107/162‑1 (MQ=255) cTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAAc < 1:56619/250‑1 (MQ=255) aaCCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAAc < 1:251866/250‑1 (MQ=255) ccATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGt > 1:144199/1‑251 (MQ=255) ccATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGt > 1:872231/1‑251 (MQ=255) tGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAg < 1:396785/251‑1 (MQ=255) tGCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAg < 1:315456/251‑1 (MQ=255) gCACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGt > 1:484816/1‑251 (MQ=255) cACTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGt < 1:679574/250‑1 (MQ=255) cTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGt < 1:42466/155‑1 (MQ=255) cTTGATCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGAt < 1:776346/251‑1 (MQ=255) aTCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAAc > 1:507251/1‑232 (MQ=255) aTCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATg > 1:553151/1‑251 (MQ=255) tCCACTGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATGc < 1:414644/251‑1 (MQ=255) tGGTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATGCAatat < 1:654033/251‑1 (MQ=255) ggTGCGGGCTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTc < 1:514422/210‑1 (MQ=255) cTGCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATGCAATATGAg < 1:255151/245‑1 (MQ=255) gCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTTAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAAc < 1:528661/205‑1 (MQ=255) gCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGt > 1:490406/1‑138 (MQ=255) gCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGt > 1:746477/1‑218 (MQ=255) gCCTTACAGGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATGCAatat < 1:774960/240‑1 (MQ=255) | ATTCTTGGGTGGCACAAAAATGAGCGAAAATCCCGTGTGAATACATTACTTGAATTAGTGAATTTGCCACCTGCGCAATATCAGGATCGCTATCCGCGCGAACTTTCCGGTGGAGAACAACAACGGATAGGCATTTTACGGGCTATTGCTGCTAATCCCCATTTATTGCTCATGGATGAACCATTTTCTGCACTTGATCCACTGGTGCGGGCTGCCTTACAAGATCAAATTTCGTTGATCCATAAAAAATTCGGCACAACTATCGTGTTCGTTACTCATGACATGCAAGAAGCCTTAAAACTTGCTTGTCGCATTGGCGTCATGCAGAATGGGAAGCTGGTACAAGTAGGTACACCAAACGAAATCCAGCAACAGCCTGCCAATAGTTACGTAAAATCGCTATTCGCTTCGTCTGAACAGGCGTTAACGGTAGAGAAAGTGATTATGCAATATGAG > 1/1458867‑1459322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |