Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,423,239	G→A	intergenic (‑4988/‑68296)	unknown ← / → unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,423,239	0	G	A	100.0%	191.1 / NA	67	intergenic (‑4988/‑68296)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (38/29);  total (38/29)

TTCAATTAAACTTTGTAGCCAACGTTGCGCTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAGAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTCACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACG  >  1/1422993‑1423485                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       ttCAATTAAACTTTGTAGCCAACGTTGCGCTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGc                                                                                                                                                                                                                                                    <  1:50381/251‑1 (MQ=255)                   ccAACGTTGCGCTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGca                                                                                                                                                                                                                                  <  1:252125/251‑1 (MQ=255)                      aCGTTGCGCTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGcaca                                                                                                                                                                                                                                >  1:84034/1‑250 (MQ=255)                       cGTTGCGCTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACg                                                                                                                                                                                                                              <  1:7384/251‑1 (MQ=255)                              cTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAg                                                                                                                                                                                                                       >  1:16597/1‑251 (MQ=255)                                  aaTTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTg                                                                                                                                                                                                                                          <  1:490893/228‑1 (MQ=255)                                      tgtgCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCAc                                                                                                                                                                                                               <  1:223759/251‑1 (MQ=255)                                              cGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTc                                                                                                                                                                                                        <  1:507029/250‑1 (MQ=255)                                                  cTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTcaccac                                                                                                                                                                                                   <  1:519162/251‑1 (MQ=255)                                                    gTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACgg                                                                                                                                                                                                 >  1:168733/1‑251 (MQ=255)                                                      cGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTc                                                                                                                                                                                                                                        <  1:166800/210‑1 (MQ=255)                                                      cGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACgg                                                                                                                                                                                                 >  1:178855/1‑249 (MQ=255)                                                      cGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTg                                                                                                                                                                                               >  1:742689/1‑251 (MQ=255)                                                      cGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTg                                                                                                                                                                                               >  1:614564/1‑251 (MQ=255)                                                                gCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTc                                                                                                                                                                                                                                        >  1:254568/1‑200 (MQ=255)                                                                gCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACgg                                                                                                                                                                                                 >  1:129734/1‑239 (MQ=255)                                                                 cccTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTcaccac                                                                                                                                                                                                   >  1:49096/1‑236 (MQ=255)                                                                   cTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTaaa                                                                                                                                                                                  >  1:401834/1‑251 (MQ=255)                                                                    tGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGT‑TGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAata                                                                                                                                                                                <  1:691040/251‑1 (MQ=255)                                                                     gTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGc                                                                                                                                                                                                                         <  1:387445/210‑1 (MQ=255)                                                                     gTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAg                                                                                                                                                                                                                       <  1:894588/212‑1 (MQ=255)                                                                      tttATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAata                                                                                                                                                                                <  1:808002/250‑1 (MQ=255)                                                                       ttATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGca                                                                                                                                                                                                                                  <  1:417605/199‑1 (MQ=255)                                                                        tataCGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAAc                                                                                                                                                                                         >  1:10483/1‑239 (MQ=255)                                                                             gCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAAc                                                                                                                                                                                         >  1:12826/1‑234 (MQ=255)                                                                             gCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAAt                                                                                                                                                                        >  1:371404/1‑251 (MQ=255)                                                                                       ccgcGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAAc                                                                                                                                                              <  1:236736/251‑1 (MQ=255)                                                                                            aCCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTcaccac                                                                                                                                                                                                   >  1:272404/1‑209 (MQ=255)                                                                                            aCCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGG‑TTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGa                                                                                                                                                        >  1:859427/1‑251 (MQ=255)                                                                                                           aTTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATgg                                                                                                                                                                      >  1:77682/1‑223 (MQ=255)                                                                                                           aTTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCAt                                                                                                                                          >  1:508443/1‑251 (MQ=255)                                                                                                               gATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACgttg                                                                                                                                                                                                           >  1:324474/1‑182 (MQ=255)                                                                                                                aTCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAgg                                                                                                                                                                                                                                                     <  1:466464/139‑1 (MQ=255)                                                                                                                aTCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATaa                                                                                                                                                                         >  1:684014/1‑215 (MQ=255)                                                                                                                   cATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGt                                                                                                                                  >  1:410401/1‑251 (MQ=255)                                                                                                                          tcGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGc                                                                                                                           <  1:417057/251‑1 (MQ=255)                                                                                                                             gTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAg                                                                                                                                                                                                                       >  1:757159/1‑156 (MQ=255)                                                                                                                                  aaTTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAAt                                                                                                                   >  1:685983/1‑251 (MQ=255)                                                                                                                                         aCTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCttttt                                                                                                            >  1:508944/1‑250 (MQ=255)                                                                                                                                                          gTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCAtt                                                                                                                                                                                                                                            <  1:782931/106‑1 (MQ=255)                                                                                                                                                          gTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCcgcg                                                                                           >  1:719484/1‑251 (MQ=255)                                                                                                                                                                   aaTCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACaa                                                                                                                     <  1:340428/216‑1 (MQ=255)                                                                                                                                                                               aTGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTcaccac                                                                                                                                                                                                   >  1:334322/1‑126 (MQ=255)                                                                                                                                                                               aTGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCa                                                                      >  1:476598/1‑251 (MQ=255)                                                                                                                                                                                tGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTg                                                                                                                                                                                                                                          >  1:779098/1‑86 (MQ=255)                                                                                                                                                                                tGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGAt                                                                                                                              <  1:303932/194‑1 (MQ=255)                                                                                                                                                                                tGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACAt                                                                            <  1:700758/244‑1 (MQ=255)                                                                                                                                                                                tGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCaa                                                                     >  1:462924/1‑251 (MQ=255)                                                                                                                                                                                      gACTGATAGCCATTGGCTTTCGGCACGGTAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACaaa                                                                                                                    <  1:451877/198‑1 (MQ=255)                                                                                                                                                                                      gACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGc                                                                                                                                                                                                                                                    >  1:296646/1‑70 (MQ=255)                                                                                                                                                                                       aCTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGcc                                                                >  1:99793/1‑249 (MQ=255)                                                                                                                                                                                        cTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCa                                                                      <  1:704302/242‑1 (MQ=255)                                                                                                                                                                                            tAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGAt                                                         <  1:885516/251‑1 (MQ=255)                                                                                                                                                                                              gCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAAc                                                                                                                                                                                         >  1:79491/1‑121 (MQ=255)                                                                                                                                                                                                    ggCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCgg                                                 >  1:850191/1‑251 (MQ=255)                                                                                                                                                                                                            gcacggcaATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACgt                                                                                                                                                                                                             <  1:728575/87‑1 (MQ=255)                                                                                                                                                                                                                 gcaATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATAc                                                                                  >  1:121963/1‑205 (MQ=255)                                                                                                                                                                                                                 gcaATATAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACAt                                                                            >  1:346955/1‑211 (MQ=255)                                                                                                                                                                                                                    atatAATCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATACTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCAt                                 >  1:435034/1‑251 (MQ=255)                                                                                                                                                                                                                          tCTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAAcg                                                                                                                                                                                        <  1:637303/94‑1 (MQ=255)                                                                                                                                                                                                                           cTTTTACCCGACCCGGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCttttta                                                                                                           <  1:462562/170‑3 (MQ=255)                                                                                                                                                                                                                                     acccgGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTc                              <  1:176756/237‑1 (MQ=255)                                                                                                                                                                                                                                     acccgGGCGCGGTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACcg                 >  1:550091/1‑250 (MQ=255)                                                                                                                                                                                                                                                gTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTg                                                                                                                                    <  1:770807/124‑1 (MQ=255)                                                                                                                                                                                                                                                gTTTATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACaaa                                                                                                                    >  1:506726/1‑140 (MQ=255)                                                                                                                                                                                                                                                  ttATAAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTcaccac                                                                                                                                                                                                   <  1:495994/59‑1 (MQ=255)                                                                                                                                                                                                                                                   tataAAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACg  >  1:597052/1‑251 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                       TTCAATTAAACTTTGTAGCCAACGTTGCGCTTTAATTTGTGCCGGCGTGCTGTCGTTACGACCGCCCTGTTTATACGCCCAATGCGCCGCGACCCCCATTTCCGCCATTTGATCCATTTCTTCGGTACGAATTTGCACTTCCACCGGCACGCCGTGCGGACCAATCATCGACGTATGTAAGGACTGATAGCCATTGGCTTTCGGCACGGCAATATAATCTTTTACCCGACCCGGGCGCGGTTTATAGAGGCTGTGCATTTGTCCAAGCACACGATAGCAGGTATCCACGTTGTTCACCACGGTGCGGAACGCGTAAATATCCATAATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTCACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACG  >  1/1422993‑1423485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑