Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,422,733	T→G	intergenic (‑4482/‑68802)	unknown ← / → unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,422,733	0	T	G	100.0%	237.2 / NA	81	intergenic (‑4482/‑68802)	unknown/unknown	SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Ser‑GGA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (39/42);  total (39/42)

TTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGTCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAGAA  >  1/1422509‑1422972                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                tttCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATg                                                                                                                                                                                                                       <  1:184540/251‑1 (MQ=255)  ttCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATgg                                                                                                                                                                                                                      <  1:213652/251‑1 (MQ=255)   tCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGt                                                                                                                                                                                                                     >  1:224608/1‑251 (MQ=255)   tCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGt                                                                                                                                                                                                                     >  1:513833/1‑251 (MQ=255)    ccATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTc                                                                                                                                                                                                                    <  1:718306/251‑1 (MQ=255)        aaataaatCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGc                                                                                                                                                                                                                 >  1:731036/1‑250 (MQ=255)            aaatCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGa                                                                                                                                                                                                            <  1:879647/251‑1 (MQ=255)                cATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTc                                                                                                                                                                                                         >  1:122008/1‑250 (MQ=255)                      aaCTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAgg                                                                                                                                                                                                    >  1:126126/1‑249 (MQ=255)                           gCTAATTTCAGATCCGCTAAGACATTTTGGGAATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGCGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGa                                                                                                                                                                                             >  1:76345/1‑251 (MQ=255)                            cTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGAt                                                                                                                                                                                            <  1:752775/251‑1 (MQ=255)                                     gATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAAc                                                                                                                                                                                         >  1:560162/1‑245 (MQ=255)                                       tCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAgg                                                                                                                                                                                 <  1:511103/251‑1 (MQ=255)                                         cGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGtt                                                                                                                                                                               >  1:21095/1‑251 (MQ=255)                                               gACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGAt                                                                                                                                                                         >  1:21592/1‑251 (MQ=255)                                                           atatTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAgg                                                                                                                                                                                 <  1:316737/231‑1 (MQ=255)                                                           atatTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTggcgg                                                                                                                                                             >  1:431396/1‑251 (MQ=255)                                                           atatTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTggcgg                                                                                                                                                             >  1:744885/1‑251 (MQ=255)                                                             atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGc                                                                                                                                                                                                   >  1:845671/1‑211 (MQ=255)                                                             atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGc                                                                                                                                                                                                   <  1:147247/211‑1 (MQ=255)                                                             atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAgg                                                                                                                                                                                 >  1:100265/1‑229 (MQ=255)                                                             atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGgcggcg                                                                                                                                                           >  1:534938/1‑251 (MQ=255)                                                             atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGgcggcg                                                                                                                                                           >  1:461364/1‑251 (MQ=255)                                                             atTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGgcggcg                                                                                                                                                           >  1:383500/1‑251 (MQ=255)                                                               acAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGa                                                                                                                                                          >  1:611995/2‑250 (MQ=255)                                                                  atatTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATgg                                                                                                                                                                                                                      <  1:524030/187‑1 (MQ=255)                                                                  atatTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTgg                                                                                                                                                                <  1:91910/241‑1 (MQ=255)                                                                  atatTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGAcaca                                                                                                                                                      >  1:552707/1‑251 (MQ=255)                                                                    atTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAAt                                                                                                                                                    >  1:480407/1‑251 (MQ=255)                                                                                 aaTTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAat                                                                                                                                                                                                                              >  1:699318/1‑164 (MQ=255)                                                                                     ttAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCtgtg                                                                                                                                   <  1:443721/251‑1 (MQ=255)                                                                                        aCGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGc                                                                                                                                <  1:70498/251‑1 (MQ=255)                                                                                        aCGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGc                                                                                                                                <  1:878553/251‑1 (MQ=255)                                                                                           gACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGc                                                                                                                                                                                                                                         <  1:143282/143‑1 (MQ=255)                                                                                           gACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTc                                                                                                                                                 >  1:580896/1‑231 (MQ=255)                                                                                           gACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACg                                                                                                                             >  1:348766/1‑251 (MQ=255)                                                                                             cTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGAtt                                                                                                                                                                                                          >  1:517372/1‑172 (MQ=255)                                                                                             cTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACgg                                                                                                                            >  1:661466/1‑250 (MQ=255)                                                                                                    cGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGc                                                                                                                     <  1:1911/250‑1 (MQ=255)                                                                                                    cGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCa                                                                                                                    <  1:659219/251‑1 (MQ=255)                                                                                                            aaTTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGAt                                                                                                                                                                         >  1:574386/1‑190 (MQ=255)                                                                                                                       aCCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGc                                                                                                                                                                                                                                         <  1:637248/115‑1 (MQ=255)                                                                                                                        ccGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGcc                                                                                                <  1:251151/251‑1 (MQ=255)                                                                                                                          ggATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTgcgc                                                                                                 <  1:706375/248‑1 (MQ=255)                                                                                                                           gATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCgg                                                                                                         <  1:269164/239‑1 (MQ=255)                                                                                                                               cAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGt                                                                                         <  1:4390/251‑1 (MQ=255)                                                                                                                                  tGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGc                                                                                      <  1:812500/251‑1 (MQ=255)                                                                                                                                   ggCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGc                                                                                                                           <  1:432120/213‑1 (MQ=255)                                                                                                                                       tcatcaCGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTAc                                                                                 <  1:285226/251‑1 (MQ=255)                                                                                                                                         atcaCGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa                                                                               <  1:119353/251‑1 (MQ=255)                                                                                                                                         atcaCGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa                                                                               <  1:862222/251‑1 (MQ=255)                                                                                                                                               acgCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATgcgc                                                                          <  1:37396/250‑1 (MQ=255)                                                                                                                                                      tCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCAc                                                                                                                              <  1:368905/191‑1 (MQ=255)                                                                                                                                                      tCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa                                                                               <  1:476422/238‑1 (MQ=255)                                                                                                                                                      tCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCgg                                                                  >  1:551149/1‑251 (MQ=255)                                                                                                                                                       cTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa                                                                               >  1:38848/1‑237 (MQ=255)                                                                                                                                                         tttAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTc                                                                                                                                                 <  1:238762/169‑1 (MQ=255)                                                                                                                                                             aaGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAac                                                           <  1:683330/251‑1 (MQ=255)                                                                                                                                                                cGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAaca                                                          <  1:608264/249‑1 (MQ=255)                                                                                                                                                                 gTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACAt                                                       >  1:867380/1‑251 (MQ=255)                                                                                                                                                                   gACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTc                                                                                                                                                 <  1:564122/159‑1 (MQ=255)                                                                                                                                                                   gACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTg                                                                                                                                               <  1:388443/161‑1 (MQ=255)                                                                                                                                                                   gACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCa                                                                                                                    >  1:591320/1‑188 (MQ=255)                                                                                                                                                                     cGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAAt                                                   <  1:258832/251‑1 (MQ=255)                                                                                                                                                                        aTACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAAttt                                                 >  1:715084/1‑250 (MQ=255)                                                                                                                                                                          aCTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTgg                                                                                                                                                                >  1:375634/1‑137 (MQ=255)                                                                                                                                                                           cTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAAtttcttt                                             >  1:212243/1‑251 (MQ=255)                                                                                                                                                                                   aGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCa                                                                                                                    <  1:730399/172‑1 (MQ=255)                                                                                                                                                                                    gCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGaaaaa                                    >  1:381582/1‑251 (MQ=255)                                                                                                                                                                                                 ccacAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGt                                                                                         <  1:729386/185‑1 (MQ=255)                                                                                                                                                                                                 ccacAAAATTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAAt                                                                              <  1:583540/196‑1 (MQ=255)                                                                                                                                                                                                      aaaTTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa                                                                               >  1:807964/1‑190 (MQ=255)                                                                                                                                                                                                      aaaTTAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCttt                   >  1:403916/1‑250 (MQ=255)                                                                                                                                                                                                          tAAGCCAAGCCACATTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATa              <  1:689140/251‑1 (MQ=255)                                                                                                                                                                                                                    cacaTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAg    <  1:51292/251‑1 (MQ=255)                                                                                                                                                                                                                     acaTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACaa                                                                               <  1:359770/175‑1 (MQ=255)                                                                                                                                                                                                                     acaTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAGa   >  1:806943/1‑251 (MQ=255)                                                                                                                                                                                                                     acaTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAGa   >  1:605074/1‑251 (MQ=255)                                                                                                                                                                                                                      caTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGtt                                                                                                                                                                               <  1:309548/78‑1 (MQ=255)                                                                                                                                                                                                                      caTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAGaa  >  1:720007/1‑251 (MQ=255)                                                                                                                                                                                                                      caTTAGGTTTGGCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAGaa  >  1:88035/1‑251 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                TTTCCATAAATAAATCATTTAAACTTGCTAATTTCAGATCCGCTAAGACATTTTGGGTATATTCAATATTGAGTTCTTCTAATTTTAACGGACTCAAAGCGTGCGCTAATTGGCGCTTACCGGATTCAATGGCTTCATCACGACGCAAATCTTTTAAAGCGTGACGAATACTGGAACGAGCTTTGGCGGTCACCACAAAATTAAGCCAAGCCACATTAGGTTTGTCATTCGGCGAGGTTAAAATATCAATGGTCTGCCCGGATTCCAAGGCTTGCGATAACGGATAAGGTTTACGATCCACATTGGCGGCGACACAATTTCTGCCCACATCTGTGTGCACGGCATAGGCAAAATCCACCGGCGTTGCGCCTTTCGGTAGCTCTACAATGCGCCCTTTCGGTGTAAACACATAAATTTCTTTCGGGAAAAATTCCGATTTTACGCTTTCGATAAATTCAAAAGAA  >  1/1422509‑1422972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑