| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 185,667 | T→C | intergenic (‑50216/+28030) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 185,667 | 0 | T | C | 100.0% | 227.2 / NA | 79 | intergenic (‑50216/+28030) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (30/49); total (30/49) | |||||||||||
AACTGCTCCACTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACTGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTCCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTGCGTTTCCACCATGTC > 1/185424‑185902 | aaCTGCTCCACTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCg < 1:335193/251‑1 (MQ=255) tGCTCCACTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGt < 1:749936/251‑1 (MQ=255) cTCCACTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAg < 1:758699/251‑1 (MQ=255) cTCCACTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAg < 1:702622/251‑1 (MQ=255) cTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCgtgt < 1:718760/251‑1 (MQ=255) cTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCgtgt < 1:330337/251‑1 (MQ=255) tGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGtt > 1:293258/1‑251 (MQ=255) ccgccgCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTg < 1:578293/250‑1 (MQ=255) ccgcGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGt < 1:813079/250‑1 (MQ=255) ccgcGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTc < 1:674530/251‑1 (MQ=255) ccgcGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGG‑GGGTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTc < 1:798021/250‑1 (MQ=255) gcgGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGat > 1:130831/1‑251 (MQ=255) cgGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGat < 1:30489/250‑1 (MQ=255) cgGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGat < 1:47608/250‑1 (MQ=255) ggTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCg < 1:286269/225‑1 (MQ=255) gTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTg < 1:697578/249‑1 (MQ=255) gTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGAt > 1:683599/1‑251 (MQ=255) tATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGAt < 1:487886/250‑1 (MQ=255) cATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTgg < 1:473114/220‑1 (MQ=255) gCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGt > 1:387113/1‑251 (MQ=255) ccATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCg > 1:230910/1‑251 (MQ=255) cATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGa > 1:572775/1‑251 (MQ=255) ttGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTg < 1:575040/251‑1 (MQ=255) ttGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTg < 1:868300/251‑1 (MQ=255) ggtggtggtTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACa > 1:220938/1‑251 (MQ=255) gtggtggtTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACaa > 1:835283/1‑251 (MQ=255) gtggtggtTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACaa > 1:567379/1‑251 (MQ=255) tGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGtcgtcgtcg > 1:579872/1‑251 (MQ=255) gTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGt < 1:345510/153‑1 (MQ=255) gTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTg > 1:771858/1‑250 (MQ=255) cccACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGaa < 1:318754/251‑1 (MQ=255) ccaTCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAg > 1:723366/1‑251 (MQ=255) caTCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGTGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGc < 1:643598/251‑1 (MQ=255) aTCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAg > 1:255413/1‑249 (MQ=255) aTCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGc < 1:672791/250‑1 (MQ=255) aTCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATGTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCt < 1:426345/251‑1 (MQ=255) aaTCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGa < 1:632080/251‑1 (MQ=255) acaTAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGcc < 1:779803/251‑1 (MQ=255) caTAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGa < 1:797932/141‑1 (MQ=255) gCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAgtcgtc > 1:734618/1‑208 (MQ=255) gCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCg > 1:872722/1‑251 (MQ=255) tgctgcCGGCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATGTCCAATTGTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATAttt < 1:764647/251‑1 (MQ=255) gtgCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGc > 1:387358/1‑215 (MQ=255) tgCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCAc < 1:490935/251‑1 (MQ=255) cAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCAcc < 1:496194/250‑1 (MQ=255) aCGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGc < 1:361187/131‑1 (MQ=255) cGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAg > 1:757657/1‑250 (MQ=255) ccACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGTGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat < 1:430142/251‑1 (MQ=255) ccACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat < 1:550224/251‑1 (MQ=255) ccACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaa < 1:893847/250‑1 (MQ=255) ccACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGGGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaa < 1:570424/250‑1 (MQ=255) ccGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAg < 1:106050/251‑1 (MQ=255) ccGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAg < 1:676363/251‑1 (MQ=255) gTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaa < 1:668676/244‑1 (MQ=255) ggATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTgg < 1:247039/219‑1 (MQ=255) ggATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGaaa > 1:824868/1‑251 (MQ=255) aTTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCAc > 1:526125/1‑193 (MQ=255) tttCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCa > 1:704911/1‑251 (MQ=255) aTTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat > 1:488/1‑221 (MQ=255) gCTGTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat > 1:280077/1‑215 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGAt < 1:58300/64‑1 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCAc < 1:877814/177‑1 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATtttg < 1:665772/187‑1 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCAcc > 1:778213/1‑200 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaata < 1:752616/213‑1 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaa < 1:806973/211‑1 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGtt < 1:105764/243‑1 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTg > 1:632480/1‑250 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTg > 1:775539/1‑250 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTg > 1:856948/1‑250 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTg > 1:552112/1‑250 (MQ=255) gTTGATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAACCCGCAc > 1:429351/1‑177 (MQ=255) gATACAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat > 1:872133/1‑209 (MQ=255) cAGTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaata < 1:830576/206‑1 (MQ=255) gTGAATCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAAc > 1:618704/1‑98 (MQ=255) tCCGCATTTTGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTGCGTTTCCACCATGTc < 1:876467/251‑1 (MQ=255) ttGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGc < 1:134701/140‑1 (MQ=255) ttGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat < 1:763172/190‑1 (MQ=255) ttGCAACCGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTTCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTtaat < 1:240943/190‑1 (MQ=255) | AACTGCTCCACTGCCGCCGCGCGGAAGGTATCGCCCGCCGCCAACATGACGGATTTGCCTTCCATTTGGAATTTGCGCGCCAACTTGCCGATGGTGGTGGTTTTGCCCACGCCGTTTACGCCCACCATCAAAATCACATAAGGCTTTTTGCTGCCGTCGATGTGCAACGGTTGCGCCACCGGTTTCAGGATTTCGCCCATTTCCAATTTTAGCTGTTGATACAGTGAATCCGCATTTTGCAACTGTTGGCGGGTAGCGTGTTGGGTCAGATTATTGATAATTTTGGTGGTGGTCGGCACGCCGATGTCGGCGATAAGTAACTGTTCTTCCAATTCCTCGAACAAGTCGTCGTCGATTTTTTTGCCTAAGAAAAAGCTACGGAAGCCCGCACCGATATTTTGTTTGGTTTTCACCAAGCCTTTTAATAAGCGACTGAAAAAGCCGCCTTCACTTGGTTTTTCCTGCGTTTCCACCATGTC > 1/185424‑185902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |