Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,409,574	T→C	intergenic (‑16187/+3731)	unknown ← / ← unknown	tRNA‑Val‑GAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,409,574	0	T	C	100.0%	134.4 / NA	48	intergenic (‑16187/+3731)	unknown/unknown	tRNA‑Val‑GAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (21/27);  total (21/27)

CATTTCGCTTTTCAAGCCCGAATATCATAAATAAAAAACCCGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCTGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATGTTCTTCACGGGTTAAATT  >  1/1409332‑1409798                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                 cATTTCGCTTTTCAAGCCCGAATATCATAAATAAAAAACCCGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCAc                                                                                                                                                                                                                           <  1:139213/250‑1 (MQ=255)                 cccGAATATCATAAATAAAAAACCCGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTacac                                                                                                                                                                                                            <  1:523538/249‑1 (MQ=255)                 cccGAATATCATAAATAAAAAACCCGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTacac                                                                                                                                                                                                            <  1:359988/249‑1 (MQ=255)                            taaataaaAAACCCGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACCCTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGc                                                                                                                                                                                               <  1:180305/251‑1 (MQ=255)                                         cGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATTCTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGt                                                                                                                                                                                  <  1:701915/251‑1 (MQ=255)                                         cGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGt                                                                                                                                                                                  <  1:497805/251‑1 (MQ=255)                                           tCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAg                                                                                                                                                                                                >  1:379532/1‑235 (MQ=255)                                               catacataCTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCTGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGcc                                                                                                                                                                                              >  1:183670/1‑233 (MQ=255)                                                    atacTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGAt                                                                                                                                                                       >  1:210864/1‑251 (MQ=255)                                                     tacTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTgcgc                                                                                                                                                                           <  1:283701/246‑1 (MQ=255)                                                       cTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATaaa                                                                                                                                                                    >  1:376951/1‑251 (MQ=255)                                                        tGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAAt                                                                                                                                                                   <  1:348735/251‑1 (MQ=255)                                                                    gAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCaaaaa                                                                                                                                                        >  1:191322/1‑250 (MQ=255)                                                                         aaTCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATg                                                                                                                                                  >  1:415583/1‑251 (MQ=255)                                                                          aTCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCTTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATgg                                                                                                                                                 <  1:812160/251‑1 (MQ=255)                                                                          aTCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATgg                                                                                                                                                 <  1:15058/251‑1 (MQ=255)                                                                                       tGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATc                                                                                                                                     <  1:641459/250‑1 (MQ=255)                                                                                       tGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCATCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATc                                                                                                                                     <  1:109792/250‑1 (MQ=255)                                                                                             cTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTacac                                                                                                                                                                                                            <  1:890246/173‑1 (MQ=255)                                                                                                   aaCAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGAt                                                                                                                        <  1:448732/251‑1 (MQ=255)                                                                                                   aaCAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGAt                                                                                                                        <  1:213384/251‑1 (MQ=255)                                                                                                         cGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTacac                                                                                                                                                                                                            >  1:213633/1‑161 (MQ=255)                                                                                                          gTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAAcgcg                                                                                                                  >  1:741074/1‑250 (MQ=255)                                                                                                          gTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAAcgcg                                                                                                                  >  1:581249/1‑250 (MQ=255)                                                                                                               gTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTacac                                                                                                                                                                                                            <  1:735976/155‑1 (MQ=255)                                                                                                                               aTACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGa                                                                                             >  1:851456/1‑250 (MQ=255)                                                                                                                                    aTCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGAt                                                                                                                        >  1:206213/1‑218 (MQ=255)                                                                                                                                          tAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATAtt                                                                                 <  1:342772/251‑1 (MQ=255)                                                                                                                                               cAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGt                                                                                                                                                                                  >  1:888722/1‑149 (MQ=255)                                                                                                                                                   aTCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATCTTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGAt                                                                                                                        >  1:758795/1‑203 (MQ=255)                                                                                                                                                   aTCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAaca                                                                        >  1:642629/1‑251 (MQ=255)                                                                                                                                                         tGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAatat                                                                  <  1:136287/251‑1 (MQ=255)                                                                                                                                                               gCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCctgctg                                                                                                                                                                                         <  1:45571/126‑1 (MQ=255)                                                                                                                                                               gCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCatatat                                                                                  >  1:768906/1‑229 (MQ=255)                                                                                                                                                               gCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATcc                                                             <  1:140351/250‑1 (MQ=255)                                                                                                                                                                                        cGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATcc                                                             <  1:810993/225‑1 (MQ=255)                                                                                                                                                                                                       atGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATg                    <  1:163357/251‑1 (MQ=255)                                                                                                                                                                                                           cTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATcc                                                             <  1:405947/206‑1 (MQ=255)                                                                                                                                                                                                           cTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATGttc                 <  1:804358/250‑1 (MQ=255)                                                                                                                                                                                                              ccACACTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATAttt                                                                                <  1:660056/184‑1 (MQ=255)                                                                                                                                                                                                                   cTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAAcgc                                                                                                                   >  1:283020/1‑144 (MQ=255)                                                                                                                                                                                                                   cTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAat                                                                    >  1:229770/1‑191 (MQ=255)                                                                                                                                                                                                                   cTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATcc                                                             >  1:686255/1‑198 (MQ=255)                                                                                                                                                                                                                   cTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATGTTCTTCAc            >  1:511973/1‑247 (MQ=255)                                                                                                                                                                                                                   cTATAGGTGTGATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATGTTCTTCACGGGt        >  1:685573/1‑251 (MQ=255)                                                                                                                                                                                                                          tgtgATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATGTTCTTCACGGGTTAAAtt  <  1:608446/250‑1 (MQ=255)                                                                                                                                                                                                                             gATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGcc                                                                                                                                                                                              >  1:774869/1‑59 (MQ=255)                                                                                                                                                                                                                             gATCAATATTAATAAAATGCGCCGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGAt                                                                                                                        <  1:132991/129‑1 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                 CATTTCGCTTTTCAAGCCCGAATATCATAAATAAAAAACCCGTCTTCATACATACTGAAGATGGTTTGAAAGAATCACAACCAAAGTGCGGTCTATAAAACAATCGTTTTGTTCTTATACACAAAAATACGATCATGTAACGCAAGATCCAGTGCACGGCTTAATACTGTTTTTTCCACGTCTCGTCCGGCTTTCATCATGGCTTCCACACTATAGGTGTGATCAATATTAATAAAATGCGCTGTCGCACCGATAATTTTTACACCGCGCTCATAAGCCTGCTGATAAGGTTTTGCGCCGATAAATGCAGGCAAAAACGAATGGTGAATGTTAATCACCCGATTAGGATAACGCGCTACAAATTTCGGATTTAAGACCCGCATATATTTTGCCAACACAATATAATCCGGTGCCAATTCGTCAATTTTTTCGGCTAACAAATAATCATGTTCTTCACGGGTTAAATT  >  1/1409332‑1409798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑