| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,407,363 | G→A | intergenic (‑13976/+5942) | unknown ← / ← unknown | tRNA‑Val‑GAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,407,363 | 0 | G | A | 100.0% | 205.7 / NA | 71 | intergenic (‑13976/+5942) | unknown/unknown | tRNA‑Val‑GAC/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (42/29); total (42/29) | |||||||||||
TGCGTATAACGTGGAAAGTTTACTTTCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCGGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGACAACAACCTGACG > 1/1407138‑1407608 | tGCGTATAACGTGGAAAGTTTACTTTCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCATGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTc > 1:203589/1‑230 (MQ=255) gCGTATAACGTGGAAAGTTTACTTTCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTg > 1:541559/1‑250 (MQ=255) cGTATAACGTGGAAAGTTTACTTTCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTg > 1:666917/1‑249 (MQ=255) cGTGGAAAGTTTACTTTCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCaa > 1:187913/1‑251 (MQ=255) tCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTAc < 1:730860/251‑1 (MQ=255) tGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCttatt < 1:646197/251‑1 (MQ=255) tGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCttatt < 1:713242/251‑1 (MQ=255) tGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCttatt < 1:556615/251‑1 (MQ=255) tGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCATAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCttatt < 1:538559/251‑1 (MQ=255) cTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAg < 1:460160/250‑1 (MQ=255) tGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAgtg < 1:173650/251‑1 (MQ=255) tGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAgtg < 1:41129/251‑1 (MQ=255) tGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAgtg < 1:119223/251‑1 (MQ=255) aTACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAgtgcg > 1:671405/1‑251 (MQ=255) gATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTgcag > 1:810550/1‑251 (MQ=255) ggTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAg > 1:432392/1‑237 (MQ=255) gTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAaac < 1:477549/250‑1 (MQ=255) ctcCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAaacaac < 1:29665/251‑1 (MQ=255) cccTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACg > 1:346039/1‑250 (MQ=255) ggTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTg > 1:587922/1‑216 (MQ=255) ggTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAgtgc > 1:29592/1‑229 (MQ=255) agGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAgg > 1:872013/1‑251 (MQ=255) ggTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGt > 1:728132/1‑251 (MQ=255) gTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGt < 1:409241/250‑1 (MQ=255) cacCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCt > 1:859360/1‑167 (MQ=255) cacCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGc > 1:591409/1‑250 (MQ=255) cacCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGc > 1:469965/1‑250 (MQ=255) ccTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCtt > 1:274677/1‑172 (MQ=255) ccTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAgtg < 1:609099/210‑1 (MQ=255) aaGCGCGTCCGCGCGGAATAATCGTAACTTTATGCACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGCGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATc > 1:619253/1‑250 (MQ=255) gAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAAcc > 1:23921/1‑250 (MQ=255) cTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAAc > 1:369894/1‑149 (MQ=255) cTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTAc > 1:474218/1‑163 (MQ=255) cTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAAt > 1:890980/1‑234 (MQ=255) cTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCcgcg > 1:732975/1‑250 (MQ=255) cTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCcgcg > 1:92492/1‑250 (MQ=255) gTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCcgcgc < 1:430690/245‑1 (MQ=255) aTCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAAcc > 1:70286/1‑225 (MQ=255) aTCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATgg > 1:780461/1‑251 (MQ=255) aCCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATc < 1:146909/189‑1 (MQ=255) acaaTAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCa > 1:215317/1‑250 (MQ=255) tAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTa > 1:41471/1‑251 (MQ=255) aGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTa > 1:410185/1‑250 (MQ=255) cGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGc < 1:877684/251‑1 (MQ=255) cTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCAc < 1:98323/250‑1 (MQ=255) cTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCAc < 1:35726/250‑1 (MQ=255) cGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCcac > 1:789764/1‑214 (MQ=255) gCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAAt < 1:443754/169‑1 (MQ=255) ggATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCa > 1:754149/1‑250 (MQ=255) ttCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGAc < 1:615828/251‑1 (MQ=255) tCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGAcc < 1:518241/251‑1 (MQ=255) cTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGc > 1:448647/1‑221 (MQ=255) tGCTTATCGGTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTAc < 1:580869/251‑1 (MQ=255) gTCATGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTAc > 1:196354/1‑242 (MQ=255) aTGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAAcc < 1:220950/251‑1 (MQ=255) tGATCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCcg > 1:371920/1‑155 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAg < 1:185014/81‑1 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGt < 1:159126/163‑1 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGgcg > 1:283421/1‑183 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGgcg > 1:507741/1‑183 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCa < 1:753736/201‑1 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCa < 1:83717/201‑1 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGc > 1:367288/1‑206 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGaca > 1:249005/1‑251 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGaca > 1:333130/1‑251 (MQ=255) tCATAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGaca > 1:217405/1‑251 (MQ=255) tAGTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGt < 1:356269/160‑1 (MQ=255) gTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCcgcgc > 1:194802/1‑150 (MQ=255) gTACGACGTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGAcaacaa > 1:187343/1‑250 (MQ=255) acgacgTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCa > 1:814221/1‑194 (MQ=255) cgTTCAGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGACAACAACCTGACg < 1:469693/251‑1 (MQ=255) | TGCGTATAACGTGGAAAGTTTACTTTCCAACTGTTTTTGGCTGATACTGATTTGGTCTCCCTCAGGTAAGAAGAAGGTAACACCTAAAGCGCGTCCGCGCGGAATAATCGTAACTTTATGTACCGGATCATGTTCCGGCACTAAATAACCAACAATAGCATGACCGGCTTCGTGATAAGCGGTGGATTCTTTTTGCTTATCGGTCATGATCATAGTACGACGTTCGGGTCCCATGTTGATTTTATCTTTTGCTTTTTCAAACTCTACCATGGTTACCGTGCGCTTATTAGTGCGTGCAGCAAACAACGCAGCTTCATTAACCAGGTTCGCCAAATCCGCACCGGAATAACCCGGAGTTCCGCGCGCCAAAGTCATGGCATCCACATCCGGCGCAACCGGCACCTTACGCATATGCACTTTGAGGATTTGTTCACGACCTTTTACATCCGGCAAACCGACAACAACCTGACG > 1/1407138‑1407608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |