| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,379,985 | A→G | intergenic (+240855/+13326) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,379,985 | 0 | A | G | 98.6% | 203.8 / NA | 71 | intergenic (+240855/+13326) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (26/44); minor base T (1/0); total (27/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATGGGCGGTTGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTAGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCAACCACCAGTTACGAACGT > 1/1379739‑1380231 | aaTGGGCGGTTGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCCGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTTGCa > 1:305389/1‑250 (MQ=255)aaTGGGCGGTTGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCAc < 1:283384/251‑1 (MQ=255) ggCGGTTGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGAt > 1:818726/1‑251 (MQ=255) gTTGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGc > 1:3744/1‑250 (MQ=255) tGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGa < 1:149613/251‑1 (MQ=255) tGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGa < 1:201279/251‑1 (MQ=255) ggCATGCAACGCCAACGCCACGGCGAACAAGGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTCCCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGAtg < 1:647438/250‑1 (MQ=255) cATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGGCAAATCGGCTTGCCAGGCGGTGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACAGCCAGCCCCTCCGCCAAAGCCGGTGCGAAAACCTGGCTAGACGACACATCCAAGTCTGCTTTCCCGTTGGCACGGATTGCCGAtgtg < 1:243550/250‑1 (MQ=255) aacgccaacgccACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTc < 1:478921/251‑1 (MQ=255) cgccaacgccaCGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCaa < 1:838398/251‑1 (MQ=255) caccgccaCGGCGAACAAAGCCACTGGATGCTCGTCCCCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCACCCGGCGGGATTATCGTTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATcc < 1:332894/248‑1 (MQ=255) gAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCAc < 1:580058/214‑1 (MQ=255) aCTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAAt > 1:710490/1‑251 (MQ=255) aCTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAAt < 1:324324/251‑1 (MQ=255) tGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATgg < 1:156953/251‑1 (MQ=255) tGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATgg < 1:34906/251‑1 (MQ=255) gCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGa > 1:707257/1‑251 (MQ=255) tGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATc < 1:584237/251‑1 (MQ=255) gCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATgg > 1:890034/1‑225 (MQ=255) gCTCGGAAAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATgtgt < 1:380433/191‑1 (MQ=255) gACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGc > 1:56545/1‑250 (MQ=255) gACAAACCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGc < 1:559803/250‑1 (MQ=255) gATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAAc < 1:440770/181‑1 (MQ=255) cGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATgg < 1:655020/192‑1 (MQ=255) ggTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGt > 1:554460/1‑251 (MQ=255) tttGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTac < 1:12104/251‑1 (MQ=255) tGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTacac < 1:204682/251‑1 (MQ=255) aCCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCaa > 1:767614/1‑251 (MQ=255) aCCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCaa > 1:518573/1‑251 (MQ=255) ccATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTggg < 1:498170/221‑1 (MQ=255) ccATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAg > 1:345804/1‑251 (MQ=255) ccATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAg > 1:325570/1‑251 (MQ=255) cATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCACGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGa < 1:886531/251‑1 (MQ=255) attattCCACCGGCGGCTTGCCACGCGCACCCGGCGGGATTATCGTTTCCATCCCCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGTCGGGTGGCAATCCGTTTGTACACCATCAAGac < 1:94662/251‑1 (MQ=255) attattCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGac < 1:876768/251‑1 (MQ=255) ttattCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTacac > 1:342517/1‑241 (MQ=255) attCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGTTTATCGGTTCCTTCTCCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATgg < 1:95775/175‑1 (MQ=255) tCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCATCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAAACTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTg > 1:578021/1‑212 (MQ=255) cAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCAcc > 1:792472/1‑184 (MQ=255) gcggcgTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGAc > 1:861832/1‑188 (MQ=255) cgTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTg < 1:485830/250‑1 (MQ=255) aGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACa > 1:314183/1‑178 (MQ=255) aTTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGAtg < 1:233815/250‑1 (MQ=255) aTTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGAtg < 1:721107/250‑1 (MQ=255) tCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTc < 1:525914/251‑1 (MQ=255) ccGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTc < 1:255096/250‑1 (MQ=255) aTCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGaa > 1:297113/1‑251 (MQ=255) ccGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAAt < 1:323789/122‑1 (MQ=255) ccGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGaa > 1:227542/1‑251 (MQ=255) ccGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGaa > 1:389220/1‑251 (MQ=255) tCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGAc < 1:791292/251‑1 (MQ=255) cGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCAc < 1:647578/251‑1 (MQ=255) ccTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGAc < 1:736400/251‑1 (MQ=255) tGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACAt < 1:383054/251‑1 (MQ=255) ggTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGAtg > 1:421184/1‑198 (MQ=255) ggTTGGACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACAtt > 1:810046/1‑251 (MQ=255) ggACGACACCTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACt < 1:787315/77‑1 (MQ=255) ccTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCAt < 1:334817/143‑1 (MQ=255) ccTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGc < 1:645166/169‑1 (MQ=255) ccTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCa > 1:101282/1‑251 (MQ=255) ccTCTAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCa > 1:42729/1‑251 (MQ=255) ctctAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTc < 1:695816/190‑1 (MQ=255) ctctAAGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCaa > 1:271927/1‑251 (MQ=255) aGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTac < 1:881842/132‑1 (MQ=255) aGTCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAAc > 1:844440/1‑194 (MQ=255) tCTGCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAacac < 1:701818/149‑1 (MQ=255) gCATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGc < 1:770538/235‑1 (MQ=255) cATTCCCGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCAACCACCAGTTa < 1:147903/250‑1 (MQ=255) cccGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCAACCACCAGTTACGAAc < 1:272850/251‑1 (MQ=255) cccGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCAACCACCAGTTACGAAc < 1:222510/251‑1 (MQ=255) cGTTGGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCAACCACCAGTTACGAACGt > 1:3049/1‑251 (MQ=255) | AATGGGCGGTTGGGGCATGCAACGCCAACGCCACGGCGAACAAAGCCACTGGATGCTCGTCACCCTCGCTGCCATGCTCGGACAAATCGGCTTGCCGGGTGGCGGATTCGGTTTGAGCTACCATTATTCCAACGGCGGCGTGCCAAGCGCAACCGGCGGGATTATCGGTTCCATCACCGCCAGCCCATCCGCCAAGGCCGGCGCGAAAACCTGGTTGGACGACACCTCTAAGTCTGCATTCCCGTTAGCACGGATTGCCGATGTGTTGCTCAATCCGGGCAAAACCATTCACTATAATGGCACGGAAATCACCTATCCGGACATCAAAGCCGTCTATTGGGCGGGTGGCAATCCGTTTGTACACCATCAAGACACCAACACCTTGGTGAAAGCCTTCCAACGACCCGATGTGGTCATTGTGAACGAAGTGAACTGGACGCCGACTGCACGCATGGCGGACATTGTGTTGCCGGCAACCACCAGTTACGAACGT > 1/1379739‑1380231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |