| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,378,089 | T→C | intergenic (+238959/+15222) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,378,089 | 0 | T | C | 100.0% | 216.9 / NA | 75 | intergenic (+238959/+15222) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (35/40); total (35/40) | |||||||||||
GAACGATATGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATATGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGAC > 1/1377846‑1378331 | gAACGATATGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCg > 1:677795/1‑251 (MQ=255) cGATATGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGaaa > 1:711678/1‑251 (MQ=255) atatGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATg > 1:792953/1‑251 (MQ=255) atatGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATg > 1:250084/1‑251 (MQ=255) atatGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGAC‑AACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATgg < 1:898434/251‑1 (MQ=255) atatGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGACCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATg > 1:422536/1‑251 (MQ=255) tatGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATgg < 1:614489/251‑1 (MQ=255) tGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTg < 1:682304/251‑1 (MQ=255) gAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGa > 1:843724/1‑251 (MQ=255) ttCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGcc < 1:321858/226‑1 (MQ=255) aCCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAgg < 1:361393/251‑1 (MQ=255) tGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCg > 1:588198/1‑251 (MQ=255) gTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCg > 1:91138/1‑250 (MQ=255) gCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATg > 1:619350/1‑251 (MQ=255) cTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATg > 1:204667/1‑250 (MQ=255) cTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATg > 1:660833/1‑250 (MQ=255) tCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGccc < 1:855252/251‑1 (MQ=255) aTGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCttt > 1:518497/1‑251 (MQ=255) cTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGc > 1:853136/1‑250 (MQ=255) cTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGc > 1:140772/1‑250 (MQ=255) gAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAg < 1:48694/250‑1 (MQ=255) tttCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGcc > 1:782328/1‑235 (MQ=255) ttAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAggg < 1:225699/251‑1 (MQ=255) aaacaaacCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCGTCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCa < 1:58882/251‑1 (MQ=255) acaaacCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCaaa < 1:611888/251‑1 (MQ=255) aacCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGaaa > 1:203961/1‑184 (MQ=255) cccATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTg > 1:59035/1‑164 (MQ=255) cccATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCa > 1:222192/1‑250 (MQ=255) cGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTac < 1:592982/251‑1 (MQ=255) ccAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTacac < 1:42756/251‑1 (MQ=255) aaGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGc < 1:23107/251‑1 (MQ=255) gCCAACGAACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCACACCGAAGGGCAGAATGATAACCGAAAACGCCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGga < 1:287026/222‑1 (MQ=255) gTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGc > 1:709123/1‑195 (MQ=255) tCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGaa < 1:635710/251‑1 (MQ=255) ttGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCg < 1:840699/251‑1 (MQ=255) ccACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATc < 1:541106/205‑1 (MQ=255) caAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTacac < 1:753326/217‑1 (MQ=255) aaGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTAt > 1:61827/1‑251 (MQ=255) cATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTgg < 1:450352/251‑1 (MQ=255) aTCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGa < 1:3988/251‑1 (MQ=255) aTCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGa < 1:299204/251‑1 (MQ=255) aTCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGa < 1:15743/251‑1 (MQ=255) aTTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGc < 1:600896/251‑1 (MQ=255) ttttttGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCa < 1:712928/251‑1 (MQ=255) ttttttGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGGGGTGTATTTGGATTTAGGCa > 1:145699/1‑251 (MQ=255) tGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGgaga < 1:812587/175‑1 (MQ=255) cTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGAtt > 1:130059/1‑251 (MQ=255) aaGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAgggg < 1:735983/105‑1 (MQ=255) aGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGccc < 1:173666/133‑1 (MQ=255) ttCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAg < 1:466826/249‑1 (MQ=255) ttCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGt < 1:284931/250‑1 (MQ=255) aCGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCg < 1:51340/251‑1 (MQ=255) gATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGaa < 1:616238/204‑1 (MQ=255) gATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTtggg > 1:475520/1‑250 (MQ=255) gATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTtggg > 1:29554/1‑250 (MQ=255) cAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGa < 1:502276/251‑1 (MQ=255) aaCGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGa > 1:711537/1‑216 (MQ=255) gCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGa < 1:880872/209‑1 (MQ=255) gcACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACg > 1:494333/1‑250 (MQ=255) ccGAAGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGcaca > 1:264295/1‑251 (MQ=255) aaGGGCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAgt < 1:94211/251‑1 (MQ=255) gCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGa < 1:890757/187‑1 (MQ=255) gCAGAATGATAACCGAAAACACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGc < 1:208528/233‑1 (MQ=255) aaaCACCACTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACg > 1:521309/1‑251 (MQ=255) caccacTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGc < 1:847734/130‑1 (MQ=255) ccacTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAgtgt > 1:142198/1‑228 (MQ=255) acTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGc > 1:58444/1‑88 (MQ=255) acTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAg < 1:231107/184‑1 (MQ=255) acTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGa > 1:635100/1‑250 (MQ=255) acTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGa > 1:591400/1‑250 (MQ=255) acTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGa > 1:47008/1‑250 (MQ=255) acTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGAc < 1:119452/251‑1 (MQ=255) cTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACgg < 1:405511/124‑1 (MQ=255) cTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGc > 1:210938/1‑217 (MQ=255) cTTTATACGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGAc > 1:461803/1‑250 (MQ=255) | GAACGATATGAAAGCCACCGATTCGGAAACCTGTCGCAGCTGTCACAGCTTCGATGCTATGGAGCTTTCCGCCCAAACAAAATTAGCCAAACAAACCCATATTGACGCCAAAGCCAACGGACAAACCTGTATCGATTGCCACAAAGGCATCGTGCATTTTTTGCCTGAAGTTCACGCCGATCAAACGACGGCAAAATCCGGCGCACCGAAGGGCAGAATGATAACCGAAAACACCACTTTATATGCCACCGAAATGGTGAAAGCCCAAGGGGCGAAAGGCGGTGAAGTTCGCTTAATGCCCTTTGCCGAAGTGACGGAATGGCAGGCGCAGGGAGATCAAATCCACGGCACGTTACACGGCTGGCAACAAGTGGGCGCGGAATCCGTGGTGTATTTGGATTTAGGCAAACGGATTACAGTGGCGTTGGTGGATGAAGACGCTCGCAGTAACGCACAAGTGTTGCAAACCAAACATGACGATGTGAC > 1/1377846‑1378331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |