Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,377,602	C→T	intergenic (+238472/+15709)	unknown → / ← unknown	tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,377,602	0	C	T	100.0%	201.7 / NA	69	intergenic (+238472/+15709)	unknown/unknown	tRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (44/25);  total (44/25)

GATTTATAAGGAAATAAAGGAATTAATTTATTTTACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCCGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGTGCGGAAATGGCGCAGCGCGTGTGGAA  >  1/1377357‑1377848                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       gATTTATAAGGAAATAAAGGAATTAATTTATTTTACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAAt                                                                                                                                                                                                                                                   >  1:644397/1‑251 (MQ=255)   tttATAAGGAAATAAAGGAATTAATTTATTTTACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAAttt                                                                                                                                                                                                                                                 <  1:77792/251‑1 (MQ=255)           gAAATAAAGGAATTAATTTATTTTACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAg                                                                                                                                                                                                                                         >  1:323332/1‑251 (MQ=255)                         aattTATTTTACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGa                                                                                                                                                                                                                           >  1:804684/1‑251 (MQ=255)                                 ttACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTc                                                                                                                                                                                                                                >  1:355909/1‑238 (MQ=255)                                            aaaTCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCgcagc                                                                                                                                                                                                               <  1:286397/244‑1 (MQ=255)                                                    gTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCa                                                                                                                                                                                                                              <  1:855617/221‑1 (MQ=255)                                                    gTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGtt                                                                                                                                                                                                >  1:85989/1‑251 (MQ=255)                                                           tatttaGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGATCCAGCCa                                                                                                                                                                                         >  1:333167/1‑251 (MQ=255)                                                                  aTACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAAttt                                                                                                                                                                                                                                                 >  1:216961/1‑188 (MQ=255)                                                                     cacTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTc                                                                                                                                                                                                                                <  1:625052/202‑1 (MQ=255)                                                                     cacTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCaa                                                                                                                                                                                >  1:772802/1‑250 (MQ=255)                                                                     cacTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCaa                                                                                                                                                                                >  1:365896/1‑250 (MQ=255)                                                                       cTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACg                                                                                                                                                                              >  1:712698/1‑250 (MQ=255)                                                                       cTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACg                                                                                                                                                                              >  1:100433/1‑250 (MQ=255)                                                                         aGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCa                                                                                                                                                                           >  1:223381/1‑251 (MQ=255)                                                                           aaTCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCaaa                                                                                                                                                                         >  1:196131/1‑251 (MQ=255)                                                                                acacTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCAt                                                                                                                                                                    >  1:71848/1‑251 (MQ=255)                                                                                       cTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAgg                                                                                                                                                                                                            <  1:101344/204‑1 (MQ=255)                                                                                       cTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCgcgc                                                                                                                                                              >  1:3278/1‑250 (MQ=255)                                                                                          gTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGcc                                                                                                                                                                                          >  1:96539/1‑219 (MQ=255)                                                                                          gTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAgg                                                                                                                                                                       <  1:303615/238‑1 (MQ=255)                                                                                             gTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCcgc                                                                                                                                                                <  1:273948/242‑1 (MQ=255)                                                                                                gTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCg                                                                                                                                                    >  1:383212/1‑251 (MQ=255)                                                                                                             tttAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTAc                                                                                                                                       <  1:362887/251‑1 (MQ=255)                                                                                                                     ttaAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCaagaa                                                                                                                               >  1:377191/1‑251 (MQ=255)                                                                                                                           cGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTgg                                                                                                                         >  1:461812/1‑251 (MQ=255)                                                                                                                                  aCATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATg                                                                                                                  >  1:778449/1‑251 (MQ=255)                                                                                                                                   cATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGt                                                                                                                 >  1:203800/1‑251 (MQ=255)                                                                                                                                    aTCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTc                                                                                                                <  1:103437/251‑1 (MQ=255)                                                                                                                                        gAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCAt                                                                                                                      <  1:594579/241‑1 (MQ=255)                                                                                                                                             aTTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGAtt                                                                                                                                                <  1:836920/210‑1 (MQ=255)                                                                                                                                                ccATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTc                                                                                                    <  1:771042/251‑1 (MQ=255)                                                                                                                                                                aaaaaTTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGaaa                                                                                        >  1:343293/1‑247 (MQ=255)                                                                                                                                                                 aaaaTTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGatat                                                                                   <  1:236819/251‑1 (MQ=255)                                                                                                                                                                   aaTTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGa                                                                                      <  1:277829/246‑1 (MQ=255)                                                                                                                                                                    aTTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTAc                                                                                                                                       >  1:175819/1‑196 (MQ=255)                                                                                                                                                                    aTTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATg                                                                                                                  >  1:787375/1‑217 (MQ=255)                                                                                                                                                                               aCTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGc                                                                     <  1:697124/251‑1 (MQ=255)                                                                                                                                                                                 tttGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAg                                                                   <  1:774835/251‑1 (MQ=255)                                                                                                                                                                                  ttGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCaagaa                                                                                                                               >  1:129527/1‑190 (MQ=255)                                                                                                                                                                                    gCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTGCCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGc                                                                     >  1:337896/1‑246 (MQ=255)                                                                                                                                                                                    gCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAggg                                                                 >  1:893038/1‑250 (MQ=255)                                                                                                                                                                                        gATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAAt                                                            >  1:146473/1‑251 (MQ=255)                                                                                                                                                                                         aTGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAAtt                                                           <  1:20725/251‑1 (MQ=255)                                                                                                                                                                                                 gggTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCa                                                   >  1:229490/1‑251 (MQ=255)                                                                                                                                                                                                 gggTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCa                                                   >  1:184974/1‑251 (MQ=255)                                                                                                                                                                                                  ggTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCaa                                                  >  1:727230/1‑251 (MQ=255)                                                                                                                                                                                                   gTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGt                                                                                                                 >  1:322841/1‑187 (MQ=255)                                                                                                                                                                                                           gCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATa                                         >  1:663664/1‑251 (MQ=255)                                                                                                                                                                                                            cGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATAc                                        <  1:481145/251‑1 (MQ=255)                                                                                                                                                                                                             gTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTAc                                                                            <  1:491977/214‑1 (MQ=255)                                                                                                                                                                                                             gTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACg                                       >  1:152194/1‑251 (MQ=255)                                                                                                                                                                                                             gTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACg                                       >  1:481919/1‑251 (MQ=255)                                                                                                                                                                                                                gtgGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGat                                                                                     <  1:149533/202‑1 (MQ=255)                                                                                                                                                                                                                gtgGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACgaag                                    >  1:155412/1‑251 (MQ=255)                                                                                                                                                                                                                gtgGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACgaag                                    >  1:860653/1‑251 (MQ=255)                                                                                                                                                                                                                  ggggAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCaa                                                                                                                                  >  1:151162/1‑155 (MQ=255)                                                                                                                                                                                                                   gggAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACgaagaa                                  >  1:315780/1‑250 (MQ=255)                                                                                                                                                                                                                     gAACGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAaca                                >  1:57869/1‑250 (MQ=255)                                                                                                                                                                                                                      aaCGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAacac                               <  1:490555/250‑1 (MQ=255)                                                                                                                                                                                                                        cGCAGGTTGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGCCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGt                            >  1:339871/1‑251 (MQ=255)                                                                                                                                                                                                                              ttGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGTGCGGaa                      >  1:735097/1‑251 (MQ=255)                                                                                                                                                                                                                               tGTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGTGCGGaaa                     <  1:317431/251‑1 (MQ=255)                                                                                                                                                                                                                                gTCATGCACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGaaa                                             <  1:302346/226‑1 (MQ=255)                                                                                                                                                                                                                                      cACGAAACCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGt                            >  1:343464/1‑237 (MQ=255)                                                                                                                                                                                                                                          aaaCCGGCACGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGc                                                    >  1:862349/1‑209 (MQ=255)                                                                                                                                                                                                                                                  aCGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGTGCGGAAATGGCGCAGCGCGTGTGGaa  <  1:450538/251‑1 (MQ=255)                                                                                                                                                                                                                                                  aCGCTGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGTGCGGAAATGGCGCAGCGCGTGTGGaa  <  1:469577/251‑1 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       GATTTATAAGGAAATAAAGGAATTAATTTATTTTACTTGACTGAAATCAAAGTATTTATATTTAGATACACTAGAATCAACACTAACTCGTTGTAGTTATAAATTCCTTTTAGTTATTAAAACGCTCAAACATCGGAGTGATTCCATGTCAAAAACAAAAAAAATTATAACCGCACTTTGCCTGATGGGGCTGGGTGCCGGTGCGTTGTGGGGAACGCAGGTTGTCATGCACGAAACCGGCACGCCGGAATTTTGTGTCAGCTGCCATTCCATGAGCCATCCGCAGCAGGAATGGGAAGGTTCCAGCCATTTTGCCAACGCCAAAGGCATCCGCGCCGAATGTGCGGATTGTCACGTACCGCAAGAAGGCTGGCATTATGTCAAAGCCAAATTCATTGCGTTGAAAGATATTTGGTACGAAATGCAGGGCAAATTGGACAGCAAAGAAAAATACGAAGAACACCGTGCGGAAATGGCGCAGCGCGTGTGGAA  >  1/1377357‑1377848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑