| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,375,245 | C→T | intergenic (+236115/+18066) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,375,245 | 0 | C | T | 98.3% | 152.1 / NA | 60 | intergenic (+236115/+18066) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (25/34); total (26/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
ATTTGGAACACACGATTCCGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCGGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGCAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCGGGACATAACGGCGAAAGCCGAGAAGAACGATTTGAGG > 1/1375000‑1375488 | aTTTGGAACACACGATTCCGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATg > 1:894619/1‑251 (MQ=255)aTTTGGAACACACGATTCCGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATg < 1:547764/251‑1 (MQ=255) acacacGATTCCGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGc < 1:394009/251‑1 (MQ=255) cacacGATTCCGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCa < 1:678150/251‑1 (MQ=255) cGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTg < 1:376674/251‑1 (MQ=255) ttttttAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGAATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTg > 1:446830/1‑251 (MQ=255) ttttAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTg < 1:42111/236‑1 (MQ=255) gcGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCaa > 1:849104/1‑251 (MQ=255) gTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATg < 1:315341/212‑1 (MQ=255) gTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTg > 1:414063/1‑226 (MQ=255) gTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCaaaa > 1:338938/1‑251 (MQ=255) tATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGATCATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAg > 1:520493/1‑213 (MQ=255) aTCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGc < 1:164925/251‑1 (MQ=255) cAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCgg < 1:862242/251‑1 (MQ=255) aaTCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTAtt < 1:420333/251‑1 (MQ=255) aTCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTAttt < 1:388482/251‑1 (MQ=255) aTCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTAttt < 1:438975/251‑1 (MQ=255) ccTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACATCAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGt > 1:134662/1‑251 (MQ=255) tttGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTc < 1:780632/214‑1 (MQ=255) aCCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTg > 1:369380/1‑251 (MQ=255) ttACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTg < 1:774225/196‑1 (MQ=255) tgCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGt < 1:856111/250‑1 (MQ=255) cgcCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAg < 1:66009/250‑1 (MQ=255) aaaCAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGAttt > 1:144096/1‑174 (MQ=255) tatGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGAc < 1:807781/251‑1 (MQ=255) aGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTa < 1:539290/243‑1 (MQ=255) caacaaATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGcc < 1:505980/251‑1 (MQ=255) caacaaATTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGcc < 1:528880/251‑1 (MQ=255) aTTCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTAc < 1:489083/251‑1 (MQ=255) ttCTGGCGCCGTTGAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGGATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGccctgtat > 1:223286/1‑245 (MQ=255) gAACATGGAAATTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGGTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCGGTCAt > 1:508552/1‑251 (MQ=255) aaTTCAGTCTGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGt < 1:832523/186‑1 (MQ=255) gtctgTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTAc < 1:30340/222‑1 (MQ=255) tctgtcccccacGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGGGGCGGCAATACGTTCTGTTTTTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATc < 1:405199/242‑1 (MQ=255) tctgTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGAAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATc < 1:819613/247‑1 (MQ=255) ctgTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAAt > 1:11398/3‑248 (MQ=255) ctgTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAAt > 1:744165/3‑248 (MQ=255) ctgTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAAt > 1:302413/3‑248 (MQ=255) gTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGtt > 1:827014/1‑251 (MQ=255) caccacGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGt < 1:363660/173‑1 (MQ=255) cccGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGAAAATACTTTCTTTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTAAAAAGGAAAAAAGCGGCACGCCTTATTTCGGTGGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGATTACAAACGATATCCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTa < 1:548750/249‑1 (MQ=255) cGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTAt > 1:478577/1‑250 (MQ=255) gCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTAc > 1:614075/1‑208 (MQ=255) gCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCaa > 1:896348/1‑251 (MQ=255) aaGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTAcc < 1:114904/211‑1 (MQ=255) aaGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGGTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAAt > 1:92028/1‑251 (MQ=255) ccATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGAc < 1:40153/172‑1 (MQ=255) ttattGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATCCGTTCTGTTTGTTAAAGCAAATGTATGAGCATGATTTATTGTGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGAACCCGCCGTCATTTGATGCGCTTAATc > 1:593880/1‑219 (MQ=255) gAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCgg > 1:171967/1‑251 (MQ=255) ggCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATc > 1:99904/1‑209 (MQ=255) gATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTcc > 1:113815/1‑250 (MQ=255) gATGTGATCGCTATCGGCGGCGGCAATACGTCCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGAATTTCATTTCCGGCAAAGTcc > 1:675416/1‑250 (MQ=255) aTGTGATCGCTATCGGCGGGGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCGGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCTTTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTccc < 1:885839/250‑1 (MQ=255) aTGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCg > 1:757965/1‑251 (MQ=255) gATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCt > 1:743016/1‑201 (MQ=255) atggCTATGGGCGGCGGCAATACTTTTTGTTTTTTAATATAAATGTATGAGCATGTTTTATTGAGTTTTATTCTAGAAAAAGTCAAAACCGGCACGCTTTATTTCGGTTGGAGTGCGGGGGCCAATTTAGCGAGAAAATCCATTATAACTACAACCGATATGCCCATTACTTGCCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCGGGa < 1:388559/246‑1 (MQ=255) ttCGGCGGCGGCAATACGTTCTGTTTGTAAAAGTAAATGTATGAGCATGATTTATTGAGCATAATTCGTAAAAAAGTCAAAAGCGCCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTCCAAACGATATGCCAATTACGTCCCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCGGGACATAACgg < 1:427154/250‑1 (MQ=255) aCGTTCTGTTTGTTAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGAc < 1:256461/128‑1 (MQ=255) tttgttAAAGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTAAAAGGCGGCCCGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCAATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCGGGACATAACGGCGAAAGCCGAGAAGAACGATTTg < 1:500178/251‑1 (MQ=255) taaaaGTAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTAAAAAGCGGCACGCTTTATTTCGGTTGGAGTGCCGGCGCAAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCGGGACATAACGGCGAAAGCCGAGAAGAACGATTTGAgg < 1:790479/248‑1 (MQ=255) | ATTTGGAACACACGATTCCGTGGCTACAAGATTTTTTAGCAGCGTATCAAGGCAAGAAAATCGCCTTTGTACCTTACGCGGGTGTGCGCCAAAACAACGATCAATATGAGCAAAAAGTACAACAAATTCTGGCGCCGTTGAACATGGAAATTCAGTCGGTACACCACGGCAAGCCACATCGTGCCATTATTGAACAGGCGGATGTGATCGCTATCGGCGGCGGCAATACGTTCTGTTTGTTAAAGCAAATGTATGAGCATGATTTATTGAGCATTATTCGTGAAAAAGTCAAAAGCGGCACGCCTTATTTCGGTTGGAGTGCCGGCGCCAATGTAGCGAGCAAATCCATTATGACTACAAACGATATGCCCATTACGTACCCGCCGTCATTTGATGCGCTTAATCTGTTCCCTTATCAAATTAATCCGCATTTCATTTCCGGCAAAGTCCCGGGACATAACGGCGAAAGCCGAGAAGAACGATTTGAGG > 1/1375000‑1375488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |