Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,366,794 C→T intergenic (+227664/+26517) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,366,7940CT100.0% 190.8 / NA 64intergenic (+227664/+26517)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (31/33);  total (31/33)

ATCCAAATGGGCGAATTTCGTACATCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTCTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCACTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACGGTAAATTTTACCAAGCTGAATTAAACGAGATGGGGT  >  1/1366549‑1367040
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
aTCCAAATGGGCGAATTTCGTACATCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACg                                                                                                                                                                                                                                                   <  1:500714/251‑1 (MQ=255)
             aaTTTCGTACATCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGc                                                                                                                                                                                                                                      <  1:65118/251‑1 (MQ=255)
             aaTTTCGTACATCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTCTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAg                                                                                                                                                                                                                                       <  1:332644/250‑1 (MQ=255)
              aTTTCGTACATCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAg                                                                                                                                                                                                                                       >  1:881098/1‑249 (MQ=255)
                        tCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATaaa                                                                                                                                                                                                                           >  1:51113/1‑251 (MQ=255)
                        tCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATaaa                                                                                                                                                                                                                           >  1:811290/1‑251 (MQ=255)
                             gTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACg                                                                                                                                                                                                                                                   <  1:153008/222‑1 (MQ=255)
                                      aaTAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAacacac                                                                                                                                                                                                             <  1:452191/251‑1 (MQ=255)
                                        tAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAg                                                                                                                                                                                                           >  1:565111/1‑251 (MQ=255)
                                           ccATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGc                                                                                                                                                                                                        <  1:302712/251‑1 (MQ=255)
                                              tttttATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAAt                                                                                                                                                                                                     <  1:617096/251‑1 (MQ=255)
                                                     ccAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATgg                                                                                                                                                                                                   >  1:186102/1‑246 (MQ=255)
                                                               gCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGt                                                                                                                                                                                    >  1:639973/1‑251 (MQ=255)
                                                               gCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGt                                                                                                                                                                                    >  1:188039/1‑251 (MQ=255)
                                                                    cGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAgg                                                                                                                                                                                                          <  1:721651/224‑1 (MQ=255)
                                                                          cGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTAttt                                                                                                                                                                         <  1:206264/251‑1 (MQ=255)
                                                                            gAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTc                                                                                                                                                                        <  1:129117/250‑1 (MQ=255)
                                                                                  gTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGt                                                                                                                                                                 >  1:494965/1‑251 (MQ=255)
                                                                                            gggcAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAACGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATa                                                                                                                                                       >  1:454991/1‑251 (MQ=255)
                                                                                             ggcAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGCATTTCTTGAGGTTTTTTCCATaa                                                                                                                                                      >  1:803918/1‑251 (MQ=255)
                                                                                                    gagtgGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGt                                                                                                                                                                                    >  1:353579/1‑214 (MQ=255)
                                                                                                          gTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACg                                                                                                                                                                                            <  1:249684/200‑1 (MQ=255)
                                                                                                          gTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGttttt                                                                                                                                          >  1:631087/1‑250 (MQ=255)
                                                                                                                gCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATgg                                                                                                                                                                                                   >  1:767561/1‑187 (MQ=255)
                                                                                                                 ccAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATg                                                                                                                                     <  1:581103/248‑1 (MQ=255)
                                                                                                                             tGACGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAAc                                                                                                                      <  1:24479/251‑1 (MQ=255)
                                                                                                                               aCGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGa                                                                                                                    <  1:411646/251‑1 (MQ=255)
                                                                                                                               aCGCTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGa                                                                                                                    <  1:49511/251‑1 (MQ=255)
                                                                                                                                  cTTTTTACCAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGt                                                                                                                 >  1:496188/1‑251 (MQ=255)
                                                                                                                                    ttttACAAAAAATTTATCCATACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCGCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGGCGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTaa                                                                                                               <  1:679526/251‑1 (MQ=255)
                                                                                                                                         ccAGAAATTTATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGAt                                                                                                          <  1:199008/251‑1 (MQ=255)
                                                                                                                                                  tATCCAGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGgcg                                                                                                   >  1:616519/1‑249 (MQ=255)
                                                                                                                                                       aGACATTTTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAgg                                                                                                                                                                                                          <  1:67407/141‑1 (MQ=255)
                                                                                                                                                           attttAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATgg                                                                                                            >  1:896322/5‑231 (MQ=255)
                                                                                                                                                                     atcTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATa                                                                              <  1:131745/251‑1 (MQ=255)
                                                                                                                                                                                  gggAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATAc                                                                     >  1:532002/1‑247 (MQ=255)
                                                                                                                                                                                       aaCGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAACTTGCCAATAAAACGGCGAAACACACAGGGCAATgg                                                                                                                                                                                                   <  1:75745/116‑1 (MQ=255)
                                                                                                                                                                                               gTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCg                                                                                                                                               >  1:78237/1‑160 (MQ=255)
                                                                                                                                                                                                ttCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAAc                                                    <  1:584884/250‑1 (MQ=255)
                                                                                                                                                                                                    ataatTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGc                                                                                                                                                                                                                                      >  1:80440/1‑68 (MQ=255)
                                                                                                                                                                                                    ataatTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGc                                                                                                                                                                                                                                      >  1:622385/1‑68 (MQ=255)
                                                                                                                                                                                                    ataatTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATgg                                                                                                            >  1:325440/1‑190 (MQ=255)
                                                                                                                                                                                                     taatTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGc                                                                                                                                                                                                        <  1:814607/97‑1 (MQ=255)
                                                                                                                                                                                                     taatTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATgg                                                                                                                                                                                                   >  1:775348/1‑102 (MQ=255)
                                                                                                                                                                                                     taatTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGAt                                                                                                          >  1:855715/1‑191 (MQ=255)
                                                                                                                                                                                                       atTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTAt                                            <  1:221454/251‑1 (MQ=255)
                                                                                                                                                                                                       atTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTGTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTAt                                            <  1:717897/251‑1 (MQ=255)
                                                                                                                                                                                                         tACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTa                                          <  1:273076/251‑1 (MQ=255)
                                                                                                                                                                                                         tACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTa                                          <  1:529693/251‑1 (MQ=255)
                                                                                                                                                                                                             ccGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAAc                                       <  1:814172/250‑1 (MQ=255)
                                                                                                                                                                                                              cGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACgg                                     <  1:412736/251‑1 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTaa                                                                                                               <  1:303578/176‑1 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTaa                                                                                                               >  1:807690/1‑176 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGc                                                                                                        >  1:737899/1‑183 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATttcttc                                                        <  1:15748/231‑1 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACGGt                                    >  1:128826/1‑251 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACGGt                                    >  1:402902/1‑251 (MQ=255)
                                                                                                                                                                                                               gTCCAATTCACTCAAAATAATTTCAAACCGATCCTACATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATgg                                                                                                            >  1:900325/1‑179 (MQ=255)
                                                                                                                                                                                                                        aCTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAAc                                                                                                                              >  1:604648/1‑152 (MQ=255)
                                                                                                                                                                                                                        aCTCAAAATAATTTCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATAc                                                                     <  1:150673/209‑1 (MQ=255)
                                                                                                                                                                                                                                    ttCAAACCGATCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACGGTAAATTTTACCAAGCTGAATTa               <  1:125176/251‑1 (MQ=255)
                                                                                                                                                                                                                                             aTCCTCCATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTc                                                                                                                                                                        <  1:643863/89‑1 (MQ=255)
                                                                                                                                                                                                                                                ctccATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAAc                                       >  1:889320/1‑215 (MQ=255)
                                                                                                                                                                                                                                                 tccATTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACGGTAAATTTTACCAAGCTGAATTAAACGAGATGGGGt  >  1:419493/1‑251 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
ATCCAAATGGGCGAATTTCGTACATCCCAGTTTAATTAAATAACCATTTTTATCCAATTCACCGCCCACGGTAACGGAAAAGGTTATCGGGCGGGCAAGTGAGTGGGTTTCAGCCAGAAATTGTTTGACGCTTTTTACCAGAAATTTATCCAGACATTCTAAATCATCTTTTTGCAAGGGGAAAACGCTTTGTTCAATAATTACGCCGTCCAATTCACTCAAAATAATTTCAAACCGATCCTCCACTAACGTGGCACATAAAGCTTGCCAATAAAACGGCGAAACACACAGGGCAATGGCAGGACGTCCGCGGTTGTCGGTATTTCTTGAGGTTTTTTCCATAATCAATCGTTTTTCAATGAGGGAACGGCTCAACGATGTAATGGATGCCGGCGCTAAACCGGAAAGTTTTGATAATTCAATACGTGAGATTTCTTCAAACTGCTCTATTAAACGGTAAATTTTACCAAGCTGAATTAAACGAGATGGGGT  >  1/1366549‑1367040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑