| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 168,933 | A→G | intergenic (‑33482/+44764) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 168,933 | 0 | A | G | 98.6% | 186.7 / NA | 69 | intergenic (‑33482/+44764) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (30/38); minor base T (1/0); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GCTTTCACCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTACCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTGCTTCCAGCTTG > 1/168700‑169167 | gCTTTCACCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAAc < 1:49625/250‑1 (MQ=255)gCTTTCACCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAAc > 1:531495/1‑250 (MQ=255) ttCACCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCata > 1:325901/1‑251 (MQ=255) ttCACCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCata > 1:343822/1‑251 (MQ=255) aCCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTg < 1:749367/251‑1 (MQ=255) tcttTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTg > 1:493390/1‑250 (MQ=255) tttCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTgcgc < 1:648294/251‑1 (MQ=255) gCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCat > 1:658799/1‑226 (MQ=255) gggATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGa > 1:465071/1‑250 (MQ=255) gattATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGTTGCCGGCGGCAATGACGATGCCTTTTCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGGTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGAGCGCCTAAGCCCCACGtg > 1:819426/1‑248 (MQ=255) gattATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTg < 1:464077/220‑1 (MQ=255) gattATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGtg > 1:307929/1‑248 (MQ=255) gattATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGt < 1:387345/247‑1 (MQ=255) attATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGtgctg < 1:415205/250‑1 (MQ=255) ccATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACaa < 1:187829/251‑1 (MQ=255) tACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACg < 1:346597/251‑1 (MQ=255) ttAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGTAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTcc < 1:429552/251‑1 (MQ=255) tCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTc < 1:86703/251‑1 (MQ=255) tCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTc < 1:464513/251‑1 (MQ=255) gTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCg > 1:531111/1‑251 (MQ=255) cGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGc < 1:302423/251‑1 (MQ=255) aTGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACg > 1:536960/1‑212 (MQ=255) aTGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCCCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGt > 1:265355/1‑251 (MQ=255) gTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTc < 1:735412/188‑1 (MQ=255) tttCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACg < 1:163803/251‑1 (MQ=255) aTCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATg > 1:117658/1‑251 (MQ=255) cACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATggg < 1:618957/251‑1 (MQ=255) cACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATggg < 1:167430/251‑1 (MQ=255) cACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATggg < 1:125595/251‑1 (MQ=255) cACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAAAGACGATGCCTTTTCCGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGCTGACAACTTTTCCCGCCACCGGGAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGCTTTTCCTGCTCCGTTGGCTTGGACGGTTTATggg > 1:114417/1‑251 (MQ=255) ccATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTTCGGGTTATggggt > 1:50409/1‑249 (MQ=255) cAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACg > 1:372785/1‑210 (MQ=255) aaGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGt < 1:178491/251‑1 (MQ=255) gCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAAc < 1:899333/202‑1 (MQ=255) gCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTcc < 1:522967/214‑1 (MQ=255) gCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTTCTTCTCCGTCGGCTTGTACGGGTTATGGGGTTTGGt > 1:35287/1‑249 (MQ=255) ccATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGcc < 1:183539/147‑1 (MQ=255) ccATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACaa > 1:263390/1‑203 (MQ=255) gCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGtt < 1:75151/203‑1 (MQ=255) ccAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCgttgtt < 1:56492/251‑1 (MQ=255) ccAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCgttgtt < 1:54915/251‑1 (MQ=255) ggCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTg < 1:563337/144‑1 (MQ=255) cccgTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTgcgc < 1:751048/237‑1 (MQ=255) gTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCa > 1:14459/1‑250 (MQ=255) cGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGt < 1:796151/251‑1 (MQ=255) aTGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGATCCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAATCCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAGCGCTTCGCGCTCACGTTGctc < 1:620564/251‑1 (MQ=255) ggCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCtt > 1:138938/1‑251 (MQ=255) tttgccGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCttgttg < 1:332454/247‑1 (MQ=255) tGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTcc < 1:151016/251‑1 (MQ=255) ggcAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGtt > 1:480683/1‑251 (MQ=255) gcAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTg > 1:163924/1‑251 (MQ=255) aTGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCt < 1:791421/250‑1 (MQ=255) tGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTctcctc < 1:319253/169‑1 (MQ=255) ttCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGtc > 1:546551/1‑159 (MQ=255) ttCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCaa > 1:640351/1‑251 (MQ=255) ttCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCaa > 1:245058/1‑251 (MQ=255) gAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGt < 1:787345/193‑1 (MQ=255) cGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGctc > 1:709587/1‑193 (MQ=255) gCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGtttt > 1:894309/1‑163 (MQ=255) cccATTTGGGTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCt > 1:470523/1‑121 (MQ=255) cATTTGGGTCGAACCAAAGCGGTTGACACCTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCtt < 1:208807/251‑1 (MQ=255) tGGGTCGACCCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGTCGTGCTGGTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTTCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAg < 1:508572/251‑1 (MQ=255) ggTCGAACCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTg > 1:151487/1‑251 (MQ=255) aaCCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCGCGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAg > 1:451845/1‑244 (MQ=255) aaCCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTGCTTc > 1:82331/1‑250 (MQ=255) aaCCAAAGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTGCTTc > 1:825963/1‑250 (MQ=255) aaaGCGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTGCTTCCAgct < 1:103093/251‑1 (MQ=255) cGGTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTGCTTCCAgcttg < 1:59066/249‑1 (MQ=255) gTTGACAACTTTGCCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCt < 1:282737/98‑1 (MQ=255) | GCTTTCACCAACTGCCCTTCTTTCACCGCCAGGGATTGATTATACCCATACAAACTTAAATCGCTGTCGCCATGTTTCACAATCACCATCAAGCCATAGCCCTGCAACCAGTTGGCTAAAATCACCCGCCCGTCGGCAATGGCTTTTACCGGCGTGCCGCTGCCGGCGGCAATGACGATGCCTTTCCAGCGGAGTTCGCCCATTTGGGTCGAACCAAAGCGGTTGACAACTTTACCCGCCACCGGAAAACCATATTGTTTCTGCGGTGCGCCTAAGCCCGACGTGCTGCTTAACAAACGTTTTTCCTGCTCCGTCGGCTTGTACGGTTTATGGGTTTTGGTCTCCTCCGCCCGTTGTTTTTGCGCCAACGCTTCGCGCTCACGTTGCTCTTGTTGTTTCACCGCCTGTTCCGCCCGTTGAATTTCCTGACGCAAAGCGTTTTCATTGGCTTTCAGTGCTTCCAGCTTG > 1/168700‑169167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |