Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,274,619 G→A intergenic (+135489/+118692) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,274,6190GA100.0% 161.5 / NA 57intergenic (+135489/+118692)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (35/22);  total (35/22)

ACATTAAATTCGATAACAAAGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACGCGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAGGTACGTTGGACGGCGCAAACG  >  1/1274383‑1274865
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                      
aCATTAAATTCGATAACAAAGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGCCCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAaaacaaac                                                                                                                                                                                                                                           <  1:164380/250‑1 (MQ=255)
            aTAACAAAGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGAtt                                                                                                                                                                                                                              <  1:34371/251‑1 (MQ=255)
              aaCAAAGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTaa                                                                                                                                                                                                                            >  1:122540/1‑251 (MQ=255)
                  aaGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGAc                                                                                                                                                                                                                        <  1:549237/251‑1 (MQ=255)
                  aaGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGAc                                                                                                                                                                                                                        <  1:354221/251‑1 (MQ=255)
                       cGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTg                                                                                                                                                                                                                    >  1:630225/1‑250 (MQ=255)
                          cTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCaa                                                                                                                                                                                                                <  1:107607/251‑1 (MQ=255)
                                  ttACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATta                                                                                                                                                                                                        <  1:84284/251‑1 (MQ=255)
                                       tCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCTAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATtaataa                                                                                                                                                                                                    <  1:438237/250‑1 (MQ=255)
                                       tCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATtaataa                                                                                                                                                                                                    <  1:761012/250‑1 (MQ=255)
                                       tCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAAc                                                                                                                                                                                                   <  1:24843/251‑1 (MQ=255)
                                        cAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACg                                                                                                                                                                                                  <  1:498488/251‑1 (MQ=255)
                                         aaaaaaGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGa                                                                                                                                                                                                 <  1:38414/251‑1 (MQ=255)
                                                 aTTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATtaataa                                                                                                                                                                                                    >  1:160407/1‑240 (MQ=255)
                                                    gggTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGc                                                                                                                                                                                                                                                    >  1:291400/1‑189 (MQ=255)
                                                      gTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAAc                                                                                                                                                                                                   <  1:237343/236‑1 (MQ=255)
                                                      gTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTgcg                                                                                                                                                                                     >  1:450/1‑250 (MQ=255)
                                                      gTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTgcg                                                                                                                                                                                     >  1:490892/1‑250 (MQ=255)
                                                            aaCTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCg                                                                                                                                                                               >  1:459923/1‑250 (MQ=255)
                                                                               gTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTattcatt                                                                                                                                                            >  1:680232/1‑250 (MQ=255)
                                                                                      gTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCGTTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTa                                                                                                                                                    >  1:443597/1‑251 (MQ=255)
                                                                                       ttCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTAc                                                                                                                                                   <  1:754435/251‑1 (MQ=255)
                                                                                           ggTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACg                                                                                                                                                                                                                       >  1:610803/1‑179 (MQ=255)
                                                                                                       tCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGgcgc                                                                                                                                   <  1:847623/251‑1 (MQ=255)
                                                                                                       tCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGgcgc                                                                                                                                   <  1:765189/251‑1 (MQ=255)
                                                                                                          cGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTattc                                                                                                                                                               <  1:85221/220‑1 (MQ=255)
                                                                                                          cGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGt                                                                                                                                >  1:608501/1‑251 (MQ=255)
                                                                                                                    cGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTc                                                                                                                       >  1:406987/1‑250 (MQ=255)
                                                                                                                          aTTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCcggcgg                                                                                                                 >  1:481253/1‑250 (MQ=255)
                                                                                                                            tctcAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTattc                                                                                                                                                               >  1:265398/1‑202 (MQ=255)
                                                                                                                                   gtgtTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCAt                                                                                                                         >  1:469689/1‑233 (MQ=255)
                                                                                                                                     gtTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCg                                                                                                     >  1:672715/1‑251 (MQ=255)
                                                                                                                                      ttGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAg                                                                                                                                                                       >  1:720211/1‑184 (MQ=255)
                                                                                                                                             tcatcGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGAtg                                                                                                                                                                                               <  1:266634/153‑1 (MQ=255)
                                                                                                                                              catcGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCGGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAAttt                                                                                            >  1:166415/1‑251 (MQ=255)
                                                                                                                                                     cGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGtt                                                                                                                                                                                         <  1:773460/151‑1 (MQ=255)
                                                                                                                                                       ttACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAg                                                                                                                                                                       >  1:682419/1‑167 (MQ=255)
                                                                                                                                                       ttACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTc                                                                                                       <  1:416404/231‑1 (MQ=255)
                                                                                                                                                       ttACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCgg                                                                                   >  1:300969/1‑251 (MQ=255)
                                                                                                                                                                gaTGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAg                                                                          >  1:534637/1‑251 (MQ=255)
                                                                                                                                                                               ggAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTgg                                                                                      >  1:465892/1‑224 (MQ=255)
                                                                                                                                                                                gAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGGACCGGTaa                                                          >  1:412093/1‑251 (MQ=255)
                                                                                                                                                                                                      tCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTa                                                                                                                                                                  >  1:742668/1‑125 (MQ=255)
                                                                                                                                                                                                      tCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCg                                                                                                                                               >  1:223612/1‑144 (MQ=255)
                                                                                                                                                                                                      tCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAg                                                   >  1:572908/1‑236 (MQ=255)
                                                                                                                                                                                                      tCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACgg                                     >  1:232149/1‑250 (MQ=255)
                                                                                                                                                                                                      tCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAAAATGAAGGTTGCCCTTAACgg                                     >  1:866559/1‑250 (MQ=255)
                                                                                                                                                                                                           aTCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTcc                                                                     >  1:706805/1‑213 (MQ=255)
                                                                                                                                                                                                           aTCTTAGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACgg                                     >  1:755988/1‑245 (MQ=255)
                                                                                                                                                                                                                aGCCGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAatat                          >  1:87640/1‑251 (MQ=255)
                                                                                                                                                                                                                   cGGTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCg                                                                                    >  1:791862/1‑190 (MQ=255)
                                                                                                                                                                                                                    ggTAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAgg                      >  1:148762/1‑251 (MQ=255)
                                                                                                                                                                                                                      tAAAGCCGCTTCCGCTTACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAGGt                     <  1:626713/250‑1 (MQ=255)
                                                                                                                                                                                                                              cttccgcttACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAGGTACGTTGGAc            <  1:415400/251‑1 (MQ=255)
                                                                                                                                                                                                                                   gcttACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTccgg                                                                   <  1:526119/191‑1 (MQ=255)
                                                                                                                                                                                                                                   gcttACTACACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAGGTACGTTGGACGgcg        >  1:223823/1‑250 (MQ=255)
                                                                                                                                                                                                                                        ctacACGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAGGTACGTTGGACGGCGCAAACg  >  1:866320/1‑251 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                      
ACATTAAATTCGATAACAAAGTGCGTCTTGCCAATTACGTCAAAAAAGAATTGGGTATTGAACTTGACCCGCACGCCTTGTTTGATGTTCAGGTGAAACGTATTCACGAATATAAACGCCAAATTCTCAACGTGTTGCACATCATCGCACGTTACAACGAGATGTTGACGCACCCGGAAAAAGACTGGCAGCCGCGCGTCTTTATCTTAGCCGGTAAAGCCGCTTCCGCTTACTACGCGGCAAAACAAACTATTCATTTGATTAATGACGTTGCCAACGTGATTAATAACGATGTGCGTTTGCGCGGTCGCTTAAAAGTGGTATTCATTCCGAACTACAGCGTCAGTCTGGCGCAGTTAATCATTCCGGCGGCGGATATTTCCGAGCAAATTTCTCTGGCGGGTACGGAAGCCTCCGGTACCGGTAACATGAAGTTTGCCCTTAACGGCGCCTTAATATTAGGTACGTTGGACGGCGCAAACG  >  1/1274383‑1274865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑