Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,236,713 T→C intergenic (+97583/+156598) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,236,7130TC100.0% 201.5 / NA 67intergenic (+97583/+156598)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/28);  total (39/28)

TGAGGACTATGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTATACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAATGATGTATTAATTGAAGCGACGTCTAATCAAGTGAAT  >  1/1236468‑1236950
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                             
tGAGGACTATGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAg                                                                                                                                                                                                                                          <  1:374243/251‑1 (MQ=255)
   ggACTATGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGTTTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGgtg                                                                                                                                                                                                                                       >  1:106697/1‑251 (MQ=255)
   ggACTATGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAACCGGCTGAATGGCTACGTACACAAggcg                                                                                                                                                                                                                                       >  1:505815/1‑249 (MQ=255)
      cTATGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCTTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTaa                                                                                                                                                                                                                                    >  1:275670/1‑251 (MQ=255)
        aTGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGGCACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACaa                                                                                                                                                                                                                                           <  1:121117/242‑1 (MQ=255)
        aTGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTaaaa                                                                                                                                                                                                                                  >  1:458933/1‑251 (MQ=255)
         tGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTaaaaa                                                                                                                                                                                                                                 <  1:389114/251‑1 (MQ=255)
         tGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTaaaaa                                                                                                                                                                                                                                 <  1:293460/251‑1 (MQ=255)
         tGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTaaaaa                                                                                                                                                                                                                                 <  1:168574/251‑1 (MQ=255)
          gTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACaa                                                                                                                                                                                                                                           >  1:91988/1‑240 (MQ=255)
           tCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAat                                                                                                                                                                                                                               >  1:279527/1‑251 (MQ=255)
                                     ttttttAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGt                                                                                                                                                                                                           <  1:843290/245‑1 (MQ=255)
                                      tttttAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATg                                                                                                                                                                                                    <  1:245174/251‑1 (MQ=255)
                                         ttAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACaa                                                                                                                                                                                                                                           <  1:341549/209‑1 (MQ=255)
                                         ttAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAgg                                                                                                                                                                                                                                         <  1:23435/211‑1 (MQ=255)
                                         ttAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGaaa                                                                                                                                                                                                 >  1:780521/1‑251 (MQ=255)
                                                            cAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGt                                                                                                                                                                              >  1:548941/1‑251 (MQ=255)
                                                              gTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGtaa                                                                                                                                                                            >  1:440402/1‑251 (MQ=255)
                                                                gATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGtaata                                                                                                                                                                          >  1:393918/1‑251 (MQ=255)
                                                                 atatTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAg                                                                                                                                                                               >  1:483398/1‑245 (MQ=255)
                                                                 atatTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAg                                                                                                                                                                               >  1:477839/1‑245 (MQ=255)
                                                                 atatTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGtaataa                                                                                                                                                                         <  1:142526/251‑1 (MQ=255)
                                                                 atatTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGtaataa                                                                                                                                                                         >  1:561706/1‑251 (MQ=255)
                                                                    ttCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      <  1:342146/251‑1 (MQ=255)
                                                                    ttCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      <  1:601885/251‑1 (MQ=255)
                                                                    ttCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      <  1:222441/251‑1 (MQ=255)
                                                                      ccGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAacac                                                                                                                                                                                       <  1:218019/232‑1 (MQ=255)
                                                                      ccGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGgag                                                                                                                                                                    <  1:213328/251‑1 (MQ=255)
                                                                      ccGTTTATCTTCCTAAGCGCAGGCGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGtt                                                                                                                                                                                  >  1:393688/1‑237 (MQ=255)
                                                                               ttCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAATTGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGcaac                                                                                                                                                            <  1:726292/251‑1 (MQ=255)
                                                                               ttCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGACACAAGCGGCTGAATGGTTACGTACACCAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGcaaca                                                                                                                                                           >  1:424229/1‑251 (MQ=255)
                                                                                tCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGcaacaa                                                                                                                                                          <  1:636403/251‑1 (MQ=255)
                                                                                 ccTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAAt                                                                                                                                                         >  1:802788/1‑251 (MQ=255)
                                                                                      gcgcAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGt                                                                                                                                                                              >  1:616069/1‑225 (MQ=255)
                                                                                         cAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGaa                                                                                                                                                  <  1:777789/250‑1 (MQ=255)
                                                                                                             tttCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGc                                                                                                                              <  1:79875/250‑1 (MQ=255)
                                                                                                             tttCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGc                                                                                                                              <  1:545561/250‑1 (MQ=255)
                                                                                                              ttCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAg                                                                                                                            <  1:605939/251‑1 (MQ=255)
                                                                                                                       cGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      >  1:633594/1‑200 (MQ=255)
                                                                                                                            gAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGAATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGa                                                                                                              >  1:177068/1‑251 (MQ=255)
                                                                                                                              aTTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAAt                                                                                                            <  1:89441/251‑1 (MQ=255)
                                                                                                                                 tGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAAtt                                                                                                                                                <  1:751824/212‑1 (MQ=255)
                                                                                                                                           gCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGt                                                                                               >  1:518486/1‑251 (MQ=255)
                                                                                                                                              ggTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGtaa                                                                                                                                                                            >  1:640302/1‑171 (MQ=255)
                                                                                                                                               gTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      >  1:613971/1‑176 (MQ=255)
                                                                                                                                                    aCCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGt                                                                                                                                                                                                           >  1:507218/1‑134 (MQ=255)
                                                                                                                                                           a‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCgg                                                                               >  1:77409/1‑251 (MQ=255)
                                                                                                                                                              ggCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGc                                                                                                                                                               <  1:357444/169‑1 (MQ=255)
                                                                                                                                                              ggCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTc                                                                                             <  1:699801/235‑1 (MQ=255)
                                                                                                                                                                  tATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGtt                                                                          <  1:187379/250‑1 (MQ=255)
                                                                                                                                                                   aTTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      >  1:332523/1‑157 (MQ=255)
                                                                                                                                                                      gtgCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTaaaa                                                                                                                                                                                                                                  >  1:862647/1‑94 (MQ=255)
                                                                                                                                                                      gtgCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAgg                                                                                                                                                                      <  1:320293/154‑1 (MQ=255)
                                                                                                                                                                      gtgCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGgag                                                                                                                                                                    >  1:614514/1‑156 (MQ=255)
                                                                                                                                                                      gtgCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACAt                                                                                                                                   >  1:95473/1‑189 (MQ=255)
                                                                                                                                                                             cgcgCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTg                                                              >  1:276390/1‑251 (MQ=255)
                                                                                                                                                                                                gTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGc                                                                                                                                                               >  1:873973/1‑135 (MQ=255)
                                                                                                                                                                                                          aTTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGc                                                                                                                              >  1:740246/1‑158 (MQ=255)
                                                                                                                                                                                                          aTTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAATGATGt                                 >  1:634832/1‑251 (MQ=255)
                                                                                                                                                                                                          aTTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGAGTaaaaa                                                                                                                                                                                                                                 >  1:91112/1‑59 (MQ=255)
                                                                                                                                                                                                                  cTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAATGATGTATTAATTg                         <  1:825233/251‑1 (MQ=255)
                                                                                                                                                                                                                                    cGGCTGAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAg                                                                                                                                                                               >  1:3369/1‑83 (MQ=255)
                                                                                                                                                                                                                                         gAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAatga                                    >  1:609812/1‑217 (MQ=255)
                                                                                                                                                                                                                                         gAATGGTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAATGATGTATTAATTGAAGCGACGTCTAATCAAGTGAAt  >  1:740183/1‑251 (MQ=255)
                                                                                                                                                                                                                                              gTTACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAAt                                                                                                                                                                 >  1:272788/1‑87 (MQ=255)
                                                                                                                                                                                                                                                tACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAatga                                    >  1:281637/1‑210 (MQ=255)
                                                                                                                                                                                                                                                tACGTACACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAatga                                    >  1:705579/1‑210 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                             
TGAGGACTATGTCTATACGCAAAAAAGCGCACAGGCATTTTTTAAAGAGCAAAGCGATTGCAGTGATATTCCGTTTATCTTCCTAAGCGCAGGTGTTTCGCCGAAATTGTTTCAAGACACGCTTGAATTTGCCAAATCGGCTGGTTCTACCTTTAA‑TGGCGTATTGTGCGGACGCGCTACCTGGGCGGGCAGTGCCGAGGCATTTAAAACTCAAGGCGTGGCACAAGCGGCTGAATGGTTACGTATACAAGGTGTAAAAAATATCAATGAACTCAATGAGGTATTAATGAAATCCGCAACACCGGTTAAGTAATAAAGGAGAATGCAACAATGCAAGAATTAGTGAAAAAACATAAAGCAGGGCAACAAGTGGGAATTTGCTCGGTTTGTTCGGCGCATCCGCCGGTGGTTGAAGCAGCGTTGCGGTTTGATTTGGAGACGGATAATGATGTATTAATTGAAGCGACGTCTAATCAAGTGAAT  >  1/1236468‑1236950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑