Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,198,517 C→T intergenic (+59387/+194794) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,198,5170CT100.0% 224.7 / NA 79intergenic (+59387/+194794)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (36/43);  total (36/43)

GTATGACCAAACTGATTTTCGATAAAGACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGCTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTGATTAAATCGTCATGCTAGGTA  >  1/1198271‑1198751
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          
gTATGACCAAACTGATTTTCGATAAAGACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCa                                                                                                                                                                                                                                        >  1:570221/1‑251 (MQ=255)
               ttttCGATAAAGACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGcc                                                                                                                                                                                                                         <  1:331080/251‑1 (MQ=255)
                   cGATAAAGACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCttt                                                                                                                                                                                                                      >  1:855221/1‑250 (MQ=255)
                   cGATAAAGACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTc                                                                                                                                                                                                                     <  1:273692/251‑1 (MQ=255)
                          gACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTggg                                                                                                                                                                                                              >  1:15888/1‑251 (MQ=255)
                          gACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTggg                                                                                                                                                                                                              >  1:852166/1‑251 (MQ=255)
                                cATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAgg                                                                                                                                                                                                          >  1:893705/1‑249 (MQ=255)
                                     cgTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTAt                                                                                                                                                                                                   <  1:585864/251‑1 (MQ=255)
                                     cgTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTAt                                                                                                                                                                                                   <  1:674239/251‑1 (MQ=255)
                                      gTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATCGGTTGTGACGCGGTAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGCGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGATAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTAtt                                                                                                                                                                                                  >  1:36335/1‑251 (MQ=255)
                                       tACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTAtt                                                                                                                                                                                                  <  1:729375/250‑1 (MQ=255)
                                       tACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTg                                                                                                                                                                                                 <  1:155714/251‑1 (MQ=255)
                                       tACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTg                                                                                                                                                                                                 <  1:284076/251‑1 (MQ=255)
                                                   ccATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTc                                                                                                                                                                                     <  1:97568/251‑1 (MQ=255)
                                                   ccATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTc                                                                                                                                                                                     <  1:469189/251‑1 (MQ=255)
                                                      tcgtcgGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGt                                                                                                                                                                                  <  1:73454/251‑1 (MQ=255)
                                                            gCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTa                                                                                                                                                                                                                                     >  1:468679/1‑194 (MQ=255)
                                                                       ggTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCa                                                                                                                                                                  >  1:549228/1‑250 (MQ=255)
                                                                        gTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTAt                                                                                                                                                                                                   >  1:74364/1‑216 (MQ=255)
                                                                        gTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCAc                                                                                                                                                                 <  1:650491/250‑1 (MQ=255)
                                                                         tGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACt                                                                                                                                                                <  1:295832/250‑1 (MQ=255)
                                                                          gAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACttt                                                                                                                                                              >  1:205902/1‑251 (MQ=255)
                                                                            aTTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTAt                                                                                                                                                            <  1:478265/251‑1 (MQ=255)
                                                                               gTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAAcc                                                                                                                                                                             >  1:722763/1‑231 (MQ=255)
                                                                                       aaaTTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGtat                                                                                                                                                                                          <  1:689536/210‑1 (MQ=255)
                                                                                       aaaTTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTc                                                                                                                                                                                     >  1:302576/1‑215 (MQ=255)
                                                                                       aaaTTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATaa                                                                                                                                                 >  1:31992/1‑251 (MQ=255)
                                                                                           tGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTg                                                                                                                                             <  1:396080/251‑1 (MQ=255)
                                                                                                     aTCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAAt                                                                                                                                   <  1:259041/251‑1 (MQ=255)
                                                                                                                       gcgGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTg                                                                                                                                                                                                 >  1:752181/1‑171 (MQ=255)
                                                                                                                              aCATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGt                                                                                                                                                                                            >  1:160049/1‑169 (MQ=255)
                                                                                                                                 tCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTc                                                                                                                                                                                     <  1:325633/173‑1 (MQ=255)
                                                                                                                                  cGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGtat                                                                                                                                                                                          <  1:524713/167‑1 (MQ=255)
                                                                                                                                  cGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTg                                                                                                                                             <  1:771676/212‑1 (MQ=255)
                                                                                                                                  cGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGtttgtttg                                                                                                         >  1:232867/1‑248 (MQ=255)
                                                                                                                                       tGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGAtt                                                                                                 >  1:695981/1‑251 (MQ=255)
                                                                                                                                        gACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGt                                                                                                                                                                                  >  1:850866/1‑169 (MQ=255)
                                                                                                                                            aTCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAAt                                                                                                                                   <  1:365919/212‑1 (MQ=255)
                                                                                                                                            aTCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCaa                                                                                            >  1:240615/1‑251 (MQ=255)
                                                                                                                                               cACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATgg                                                                                         <  1:738238/251‑1 (MQ=255)
                                                                                                                                                    ccACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGt                                                                                        >  1:781957/1‑247 (MQ=255)
                                                                                                                                                      aCCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCtg                                                                                  <  1:895260/251‑1 (MQ=255)
                                                                                                                                                           aCTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGcc                                                                                                                                                                                                                         >  1:786214/1‑111 (MQ=255)
                                                                                                                                                           aCTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATg                                                                             <  1:18608/251‑1 (MQ=255)
                                                                                                                                                                 cacGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTaa                                                                       >  1:792954/1‑251 (MQ=255)
                                                                                                                                                                   cGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATg                                                                     >  1:898399/1‑251 (MQ=255)
                                                                                                                                                                   cGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATg                                                                     <  1:625386/251‑1 (MQ=255)
                                                                                                                                                                     aaTCTGTCGGTCTTGCGGGCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATggg                                                                   <  1:32560/251‑1 (MQ=255)
                                                                                                                                                                           tCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGAttt                                                             <  1:63567/251‑1 (MQ=255)
                                                                                                                                                                           tCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGAttt                                                             <  1:355069/251‑1 (MQ=255)
                                                                                                                                                                               tCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTAtct                                                         <  1:900868/251‑1 (MQ=255)
                                                                                                                                                                                    cGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTAtc                                                          >  1:613833/1‑245 (MQ=255)
                                                                                                                                                                                      gCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATAc                                                   <  1:624841/250‑1 (MQ=255)
                                                                                                                                                                                         gAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTgg                                               >  1:284170/1‑251 (MQ=255)
                                                                                                                                                                                            gtgtTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAGAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGtt                                            >  1:378808/1‑251 (MQ=255)
                                                                                                                                                                                              gtTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAg                                                                                                                                                                                             <  1:85508/104‑1 (MQ=255)
                                                                                                                                                                                              gtTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTa                                          >  1:19964/1‑251 (MQ=255)
                                                                                                                                                                                                 tGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCa                                       <  1:736272/251‑1 (MQ=255)
                                                                                                                                                                                                 tGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCa                                       <  1:422079/251‑1 (MQ=255)
                                                                                                                                                                                                        ttcggttgggtgtaacatattCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATG‑AAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGc                               <  1:832584/231‑1 (MQ=255)
                                                                                                                                                                                                        tcggtcACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTggg                                 <  1:514363/250‑1 (MQ=255)
                                                                                                                                                                                                          ggtcACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATg                                                                             <  1:766781/204‑1 (MQ=255)
                                                                                                                                                                                                          ggtcACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGc                               >  1:523212/1‑250 (MQ=255)
                                                                                                                                                                                                           gtcACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTg                                                                                                                                                                                                 >  1:597271/1‑87 (MQ=255)
                                                                                                                                                                                                           gtcACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATAc                                                   <  1:693281/229‑1 (MQ=255)
                                                                                                                                                                                                           gtcACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCaa                             >  1:273168/1‑251 (MQ=255)
                                                                                                                                                                                                              aCCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCa                              >  1:45400/1‑247 (MQ=255)
                                                                                                                                                                                                               ccGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATggg                                                                   >  1:32378/1‑209 (MQ=255)
                                                                                                                                                                                                                 gACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATggg                                                                   <  1:395707/207‑1 (MQ=255)
                                                                                                                                                                                                                 gACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGa                                                                <  1:524469/210‑1 (MQ=255)
                                                                                                                                                                                                                 gACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGttt                                           >  1:742970/1‑231 (MQ=255)
                                                                                                                                                                                                                 gACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTg                       >  1:613855/1‑251 (MQ=255)
                                                                                                                                                                                                                 gACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTg                       >  1:463281/1‑251 (MQ=255)
                                                                                                                                                                                                                   cTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTGAt                     <  1:193580/251‑1 (MQ=255)
                                                                                                                                                                                                                    ttACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTGAtt                    <  1:716972/251‑1 (MQ=255)
                                                                                                                                                                                                                    ttACCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTGAtt                    <  1:621415/251‑1 (MQ=255)
                                                                                                                                                                                                                      aCCTAATCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCtg                                                                                  <  1:691791/187‑1 (MQ=255)
                                                                                                                                                                                                                           aTCCAAAAGCGAAGAAAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTAt                                                                                                                                                                                                   >  1:74506/1‑69 (MQ=255)
                                                                                                                                                                                                                                      aagaaAAAATAATTTGTTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTGATTAAATCGTCATGCTAGGTa  <  1:263939/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          
GTATGACCAAACTGATTTTCGATAAAGACACGCATCGCGTACTTGGCGGCGCCATCGTCGGCACCAATGCCGGTGAATTGTTAGGCGAAATTGGTCTTGCCATCGAAATGGGTTGTGACGCGGAAGACATCGCATTGACTATCCACGCCCACCCGACTTTACACGAATCTGTCGGTCTTGCGGCCGAAGTGTTTGAGGGGTCGGTCACCGACTTACCTAATCCAAAAGCGAAGAAAAAATAATTTGCTTCATTAAAAATAAAAGCCTTTCCGTTGGGAAGGCTTTTATTGTAAGTATAATTCAGTTAACCGATGAAAATCACTTTATCAAACAAATAAAGTGCGGTCGGAATTGAGTGAAAAATCTGCAGTTTGTTTGCTGCGATTGGCAATGGTCAGCTGTGATGGGTTAATGGGTGATTTATCTCAATACTTGGGTTTACCACGTGGGGCAACGTTTGATTAAATCGTCATGCTAGGTA  >  1/1198271‑1198751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑