Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,192,724 T→C intergenic (+53594/+200587) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,192,7240TC100.0% 200.7 / NA 69intergenic (+53594/+200587)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (43/26);  total (43/26)

TCGTATTATTTGTTAAAAATTTGTAATGTCTGTTTTTTGTACAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGTGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGATTTAGGCGGTCACTTATCTACTTTC  >  1/1192479‑1192967
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                     
tCGTATTATTTGTTAAAAATTTGTAATGTCTGTTTTTTGTACAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑Ga                                                                                                                                                                                                                                                >  1:345282/1‑251 (MQ=255)
 cGTATTATTTGTTAAAAATTTGTAATGTCTGTTTTTTGTACAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAg                                                                                                                                                                                                                                               <  1:674745/251‑1 (MQ=255)
                          tGTCTGTTTTTTGTACAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAg                                                                                                                                                                                                                      >  1:414171/1‑251 (MQ=255)
                                      gTACAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              <  1:362286/231‑1 (MQ=255)
                                         cAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              >  1:114645/1‑228 (MQ=255)
                                                                   gATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACa                                                                                                                                                                             >  1:156557/1‑251 (MQ=255)
                                                                   gATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATCGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACa                                                                                                                                                                             >  1:37126/1‑251 (MQ=255)
                                                                         aCATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGATGGTAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              >  1:644458/1‑196 (MQ=255)
                                                                           atatTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              >  1:35225/1‑194 (MQ=255)
                                                                            tatTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATta                                                                                                                                                                      >  1:479286/1‑249 (MQ=255)
                                                                                ttAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAg                                                                                                                                                                <  1:756715/251‑1 (MQ=255)
                                                                                ttAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAg                                                                                                                                                                <  1:599485/251‑1 (MQ=255)
                                                                                   gTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              <  1:126493/186‑1 (MQ=255)
                                                                                            tCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATa                                                                                                                                                    >  1:838102/1‑251 (MQ=255)
                                                                                                 gttTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑g                                                                                                                                                                                                                                                 <  1:121456/153‑1 (MQ=255)
                                                                                                 gttTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGAt                                                                                                                                                >  1:626854/1‑250 (MQ=255)
                                                                                                 gttTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGAt                                                                                                                                                >  1:200385/1‑250 (MQ=255)
                                                                                                 gttTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGAt                                                                                                                                                >  1:722019/1‑250 (MQ=255)
                                                                                                          cTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAGGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAg                                                                                                                                                                >  1:438697/1‑225 (MQ=255)
                                                                                                          cTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGttt                                                                                                                                        >  1:315970/1‑249 (MQ=255)
                                                                                                               aaaGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              <  1:345105/158‑1 (MQ=255)
                                                                                                               aaaGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAg                                                                                                                                                                >  1:431504/1‑220 (MQ=255)
                                                                                                                 aGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGAAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAg                                                                                                                                >  1:48223/1‑250 (MQ=255)
                                                                                                                     ggTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              <  1:763518/152‑1 (MQ=255)
                                                                                                                     ggTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATgcag                                                                                                                                                                                                              >  1:135104/1‑168 (MQ=255)
                                                                                                                     ggTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTAt                                                                                                                                                                                                   >  1:501426/1‑179 (MQ=255)
                                                                                                                      gTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAAc                                                                                                                                  >  1:140505/1‑243 (MQ=255)
                                                                                                                           aCGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTc                                                                                                                                                                                                                                   <  1:130541/141‑1 (MQ=255)
                                                                                                                           aCGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATAc                                                                                                                                                   <  1:248798/221‑1 (MQ=255)
                                                                                                                           aCGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATc                                                                                                                      >  1:32087/1‑250 (MQ=255)
                                                                                                                               aCTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTg                                                                                                                                                        <  1:719212/212‑1 (MQ=255)
                                                                                                                               aCTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGa                                                                                                                 >  1:218079/1‑251 (MQ=255)
                                                                                                                                cTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATtactac                                                                                                                                                                  <  1:883489/201‑1 (MQ=255)
                                                                                                                                cTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTg                                                                                                                                                        <  1:373740/211‑1 (MQ=255)
                                                                                                                                cTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAAc                                                                                                                                  <  1:234870/233‑1 (MQ=255)
                                                                                                                                cTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGaa                                                                                                                >  1:579251/1‑251 (MQ=255)
                                                                                                                                cTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGaa                                                                                                                >  1:189823/1‑251 (MQ=255)
                                                                                                                                               aGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTg                                                                                                                                                                                                                    <  1:64413/136‑1 (MQ=255)
                                                                                                                                               aGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTg                                                                                                                                                        >  1:798481/1‑196 (MQ=255)
                                                                                                                                                gATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGAtt                                                                                                                                                             >  1:515712/1‑190 (MQ=255)
                                                                                                                                                     ggAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTa                                                                                           >  1:480404/1‑251 (MQ=255)
                                                                                                                                                            gCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATtactac                                                                                                                                                                  >  1:862052/1‑173 (MQ=255)
                                                                                                                                                               aTGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAg                                                                                                                                                                >  1:414423/1‑172 (MQ=255)
                                                                                                                                                                      aaTTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCCGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTc                                                                             <  1:379861/248‑1 (MQ=255)
                                                                                                                                                                          gTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATgcag                                                                                                                                                                                                              >  1:753274/1‑115 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTTGAGAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCtg                                                                <  1:592162/248‑1 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTg                                                                                                                                     >  1:457785/1‑177 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTc                                                                             >  1:176303/1‑233 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGc                                                                  >  1:88146/1‑244 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGtgatg                                                           >  1:326979/1‑251 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGtgatg                                                           >  1:85979/1‑251 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGtgatg                                                           >  1:277525/1‑251 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGtgatg                                                           >  1:486425/1‑251 (MQ=255)
                                                                                                                                                                                     aCGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGtgatg                                                           >  1:501085/1‑251 (MQ=255)
                                                                                                                                                                                      cGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATc                                                                                                                                               >  1:487364/1‑166 (MQ=255)
                                                                                                                                                                                          gATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATAc                                                                                                                                                   <  1:87504/158‑1 (MQ=255)
                                                                                                                                                                                            tCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGgtgt                                                    <  1:807548/251‑1 (MQ=255)
                                                                                                                                                                                               gATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCattat                                                                                                                                                                                                                              >  1:249897/1‑78 (MQ=255)
                                                                                                                                                                                               gATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTAGTGGCGGCGTTGCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATcc                                                                                                                                              <  1:770099/158‑1 (MQ=255)
                                                                                                                                                                                                    aaaCTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCtg                                                                <  1:274639/231‑1 (MQ=255)
                                                                                                                                                                                                     aaCTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGt                                            >  1:678029/1‑250 (MQ=255)
                                                                                                                                                                                                                    ggCAGCAATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTg                            >  1:419474/1‑251 (MQ=255)
                                                                                                                                                                                                                         caATTGATTCGTTAATTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGAt                          <  1:287338/248‑1 (MQ=255)
                                                                                                                                                                                                                                      aaTTCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGATTTAGGCGGTCACTTAt          <  1:722887/251‑1 (MQ=255)
                                                                                                                                                                                                                                        ttCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGAc                                                                                                        >  1:607771/1‑155 (MQ=255)
                                                                                                                                                                                                                                        ttCGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGATTTAGGCGGTCACTTATCt        <  1:363004/251‑1 (MQ=255)
                                                                                                                                                                                                                                          cGTGAAGAAGGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGATTTAGGCGGTCACTTATCTAc      <  1:341270/251‑1 (MQ=255)
                                                                                                                                                                                                                                               agaagGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGAc                                <  1:211394/220‑1 (MQ=255)
                                                                                                                                                                                                                                               agaagGCGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGATTTAGGCGGTCACTTATCTACTTTc  >  1:418839/1‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                     
TCGTATTATTTGTTAAAAATTTGTAATGTCTGTTTTTTGTACAGAAATTGTATAAGAATTTTTGACAGATTAAACATATTTTAGTTATCAATTCGTTGTTTAATTTCTACAAAAGTAGGTTAAACGTACTTCTAACTTAACAAAGATAAGGAAAAAGCTATGTCAGAATTGTTAAAAAATGACGTAGATCCGATCGAAACTAACGATTGGTTGGCAGCAATTGATTCGTTAATTCGTGAAGAAGGTGTT‑‑GAGCGTGCGCAGTTCATTATTGATCAAGTGATGCAGCAAGCTCGTATTGGCGGCGTTTCTTTGCCGACAGGGATTACTACAGATTACGTGAATACGATCCCGGTTTCTGAACAGCCCGAGTATCCGGGAAATTTAGACATTGAGCGTCGTATTCGTTCTTATGTCCGCTGGAATGCTGTGATGATGGTGTTGCGCGGTCAGAAAAAAGACCTTGATTTAGGCGGTCACTTATCTACTTTC  >  1/1192479‑1192967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑