Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,171,573 A→G intergenic (+32443/+221738) unknown → / ← unknown tRNA‑Met‑CAT/tRNA‑Val‑GAC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,171,5730AG100.0% 217.6 / NA 72intergenic (+32443/+221738)unknown/unknowntRNA‑Met‑CAT/tRNA‑Val‑GAC
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (27/45);  total (27/45)

ATAAATTCCATGGCGTGCGCCGCTTTTGCCGCTTTGATGATTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTAGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTGCGCATTCACGTTAGT  >  1/1171334‑1171818
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
aTAAATTCCATGGCGTGCGCCGCTTTTGCCGCTTTGATGATTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCgg                                                                                                                                                                                                                                             <  1:9813/250‑1 (MQ=255)
    aTTCCATGGCGTGCGCCGCTTTTGCCGCTTTGATGATTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGc                                                                                                                                                                                                                                          >  1:712323/1‑249 (MQ=255)
                 cgctgcTTTTGCCGCTTTGATGATTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGAcc                                                                                                                                                                                                                            <  1:225698/246‑1 (MQ=255)
                             cGCTTTGATGATTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGttt                                                                                                                                                                                                               <  1:556541/251‑1 (MQ=255)
                                  tgatgaTTTGTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCg                                                                                                                                                                                                          <  1:208021/251‑1 (MQ=255)
                                  tgatgaTTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCg                                                                                                                                                                                                          <  1:729526/251‑1 (MQ=255)
                                   gatgatTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACg                                                                                                                                                                                                                                   <  1:415948/225‑1 (MQ=255)
                                         ttcttcACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCg                                                                                                                                                                                                          <  1:638843/244‑1 (MQ=255)
                                                cGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCg                                                                                                                                                                                                          >  1:266173/1‑237 (MQ=255)
                                                        tttGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAatat                                                                                                                                                                                    <  1:725646/251‑1 (MQ=255)
                                                                     gcATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCggg                                                                                                                                                                       >  1:81372/1‑251 (MQ=255)
                                                                       aTAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGtt                                                                                                                                                                     <  1:856825/251‑1 (MQ=255)
                                                                                 ttgttgGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTccc                                                                                                                                                           <  1:653982/251‑1 (MQ=255)
                                                                                       gCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGt                                                                                                                                                      <  1:310567/250‑1 (MQ=255)
                                                                                        cGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAg                                                                                                                                                    <  1:734976/251‑1 (MQ=255)
                                                                                          aTCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGGTAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGc                                                                                                                                                   <  1:885864/250‑1 (MQ=255)
                                                                                                   ttAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAATCGGGTTCATCTTTCCCTTGGTAGCTGAATGTcac                                                                                                                                         <  1:409539/251‑1 (MQ=255)
                                                                                                                cTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTgaaaga                                                                                                                                                                                         >  1:601231/1‑190 (MQ=255)
                                                                                                                cTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCa                                                                                                                            >  1:764521/1‑251 (MQ=255)
                                                                                                                cTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCa                                                                                                                            >  1:302392/1‑251 (MQ=255)
                                                                                                                  tgttgGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCaa                                                                                                                           >  1:344768/1‑250 (MQ=255)
                                                                                                                       ggAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGc                                                                                                                                                                          <  1:315370/198‑1 (MQ=255)
                                                                                                                               ccGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTAcc                                                                                                             <  1:884802/251‑1 (MQ=255)
                                                                                                                               ccGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTAcc                                                                                                             <  1:665245/251‑1 (MQ=255)
                                                                                                                                         ttCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCtt                                                                                                   <  1:111630/251‑1 (MQ=255)
                                                                                                                                         ttCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCtt                                                                                                   <  1:227365/251‑1 (MQ=255)
                                                                                                                                               tAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGATTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATAc                                                                                              <  1:437878/250‑1 (MQ=255)
                                                                                                                                               tAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATAc                                                                                              <  1:733924/250‑1 (MQ=255)
                                                                                                                                               tAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATAc                                                                                              <  1:317459/250‑1 (MQ=255)
                                                                                                                                                      gACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGgt                                                                                      >  1:474213/1‑251 (MQ=255)
                                                                                                                                                          ggCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGgtgt                                                                                    >  1:594518/1‑249 (MQ=255)
                                                                                                                                                          ggCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGgtgt                                                                                    >  1:466649/1‑249 (MQ=255)
                                                                                                                                                            cGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTAcc                                                                                                             >  1:880172/1‑222 (MQ=255)
                                                                                                                                                            cGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCttt                                                                                >  1:787005/1‑251 (MQ=255)
                                                                                                                                                              aTAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCtttt                                                                               <  1:53283/250‑1 (MQ=255)
                                                                                                                                                               tAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTc                                                                             <  1:479772/251‑1 (MQ=255)
                                                                                                                                                                 aTCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTc                                                                                                        <  1:722292/222‑1 (MQ=255)
                                                                                                                                                                   ccTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCtgtg                                                                         >  1:29852/1‑251 (MQ=255)
                                                                                                                                                                        atatTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCat                                                                    >  1:736472/1‑251 (MQ=255)
                                                                                                                                                                         tatTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCg                                                                                                                                                                                                          <  1:523204/116‑1 (MQ=255)
                                                                                                                                                                         tatTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTccc                                                                                                                                                           >  1:814385/1‑163 (MQ=255)
                                                                                                                                                                           tttACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATc                                                                 <  1:686370/251‑1 (MQ=255)
                                                                                                                                                                              aCGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGt                                                                                                                                                                                                                 <  1:207967/104‑1 (MQ=255)
                                                                                                                                                                              aCGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAAt                                                                                                                               <  1:404454/186‑1 (MQ=255)
                                                                                                                                                                              aCGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCaa                                                              >  1:293024/1‑251 (MQ=255)
                                                                                                                                                                                 ccGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCaaaa                                                            <  1:704481/250‑1 (MQ=255)
                                                                                                                                                                                   gTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCt                                                                                                            <  1:374797/200‑1 (MQ=255)
                                                                                                                                                                                   gTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTg                                                                                                          >  1:20056/1‑202 (MQ=255)
                                                                                                                                                                                    tCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGc                                                         <  1:821650/250‑1 (MQ=255)
                                                                                                                                                                                        gCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTc                                                                             >  1:669/1‑226 (MQ=255)
                                                                                                                                                                                                  cccTTGGTTTATATCATAAAAGCGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGTATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGc                                          <  1:808682/251‑1 (MQ=255)
                                                                                                                                                                                                  cccTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGc                                          <  1:492467/251‑1 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAGTCTTGAAAGAAATATTGTCTAAAGCGGGCTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGc                                                         >  1:633408/1‑231 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGc                                                                                                                                                   <  1:266198/141‑1 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATAc                                                                                              <  1:361064/194‑1 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGc                                          <  1:703292/246‑1 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCAcgc                                      >  1:261829/1‑250 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCAcgc                                      >  1:485144/1‑250 (MQ=255)
                                                                                                                                                                                                       ggTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCAcgc                                      >  1:603421/1‑250 (MQ=255)
                                                                                                                                                                                                        gTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCAcgccg                                    >  1:829613/1‑251 (MQ=255)
                                                                                                                                                                                                             tatCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTccc                                                                                                                                                           >  1:294234/1‑127 (MQ=255)
                                                                                                                                                                                                              atCATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGc                              <  1:807605/251‑1 (MQ=255)
                                                                                                                                                                                                                cATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTAcc                                                                                                             >  1:111814/1‑170 (MQ=255)
                                                                                                                                                                                                                cATAAAAACGGGTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAAc                                                    >  1:896652/1‑227 (MQ=255)
                                                                                                                                                                                                                          ggTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCATGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATGCGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAAt                   <  1:13699/250‑1 (MQ=255)
                                                                                                                                                                                                                          ggTGACTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAAt                   <  1:758859/250‑1 (MQ=255)
                                                                                                                                                                                                                              aCTAAGTTGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTgcg               <  1:408997/250‑1 (MQ=255)
                                                                                                                                                                                                                                    ttGGCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTGCGCATTCa         <  1:885640/250‑1 (MQ=255)
                                                                                                                                                                                                                                      ggCGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATAc                                                                                              <  1:674768/163‑1 (MQ=255)
                                                                                                                                                                                                                                        cGATAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTGCGCATTCACgtt     <  1:780866/250‑1 (MQ=255)
                                                                                                                                                                                                                                          aTAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTgcg               >  1:623112/1‑238 (MQ=255)
                                                                                                                                                                                                                                          aTAGTGGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTGCGCATTCACgttagt  <  1:468321/251‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
ATAAATTCCATGGCGTGCGCCGCTTTTGCCGCTTTGATGATTTCTTCACGACTGTATTTGTCTTTCGCCGCATAAGCAATGTTGTTGGCGATCGTGTCATTAAATAAATGCACTTGTTGGGAGACCACCGCGCAGTTTTCGCGTAAATCGGACAGGCGATAATCCTGAATATTTACGCCGTCCAGCGTAATTTCCCCTTGGTTTATATCATAAAAACGGGTGACTAAGTTGGCGATAGTAGATTTACCGGAGCCTGAACGCCCGACCAATGCCACGGTTTTGCCGTGCGGAATCTTGAAAGAAATATTGTCTAAAGCGGGTTCATCTTTCCCTTGGTAGCTGAATGTCACATTTTTGAATTCAACGTCGCCTTTTACCTTGTCTGCTTTATACGTGCCGGTGTCTTTTTCTGTGTCCATATCCAAAATGCCGAACAGGGTTTGGCACGCCGCCATGCCGCGTTGGAATTGCGCATTCACGTTAGT  >  1/1171334‑1171818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑