| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,135,028 | G→A | intergenic (+19538/‑4026) | unknown → / → unknown | tRNA‑Gln‑TTG/tRNA‑Met‑CAT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,135,028 | 0 | G | A | 98.7% | 224.7 / NA | 79 | intergenic (+19538/‑4026) | unknown/unknown | tRNA‑Gln‑TTG/tRNA‑Met‑CAT |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (40/38); minor base C (1/0); total (41/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTATTGTTCCCGAGGGTGTTACGGATACATAAAGCCCATCACGATCGGCTACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTTAGCATTTTTATTACGTCTATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACATACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGAATTGAAATGATATGAAATAGCAAAACCCCGACATAGCGGGGCTTTATGGCTATTTTGAAATGATATGAAGTGTTATGAAATGCAGGAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAACC > 1/1134787‑1135273 | gtgatagtccctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAAccc > 1:848490/25‑250 (MQ=255) gtccctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGAc > 1:312119/19‑248 (MQ=255) gtccctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATa > 1:882325/19‑251 (MQ=255) tccctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACACCGACAt < 1:301516/232‑1 (MQ=255) cctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAgag < 1:86361/236‑3 (MQ=255) ctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAgagg < 1:567246/237‑4 (MQ=255) ctgcgggagtgactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAgagg < 1:521015/237‑4 (MQ=255) gactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAAcccc < 1:729126/227‑1 (MQ=255) gactgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTAtaa > 1:632161/5‑249 (MQ=255) actgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTAtaac < 1:485276/248‑4 (MQ=255) actgATACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTAtaac < 1:700471/248‑4 (MQ=255) ctgattcATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAgagg < 1:713484/233‑4 (MQ=255) aTACATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTAtaactatt > 1:775076/1‑244 (MQ=255) cATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAGTAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTg > 1:447236/1‑251 (MQ=255) cATAAAGCCCGTCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTg > 1:876352/1‑251 (MQ=255) gtCACGATCAGCGACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGaaac < 1:576753/244‑2 (MQ=255) cgaCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:739579/249‑1 (MQ=255) cgaCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:115321/249‑1 (MQ=255) cgaCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:303613/249‑1 (MQ=255) aCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTAtaac > 1:36541/1‑218 (MQ=255) aCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGa > 1:562477/1‑229 (MQ=255) aCTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGaaa > 1:498134/1‑251 (MQ=255) ttATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGaaa < 1:326175/248‑1 (MQ=255) ggTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATACCAAAACCCCGACATAGAGGGGCTTTAtaac > 1:424117/1‑197 (MQ=255) gTTTTAGTGATTTGATTTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTcc < 1:894574/246‑1 (MQ=255) tgatttgattTTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCg < 1:263553/249‑1 (MQ=255) atttgatttTTGAATCGGTGAGCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGc < 1:279054/251‑1 (MQ=255) gCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGaaa > 1:814399/1‑199 (MQ=255) gCATTTTTATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGt > 1:759583/1‑250 (MQ=255) tttttATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCata > 1:326503/1‑251 (MQ=255) tttttATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCata < 1:509370/251‑1 (MQ=255) ttttATTACGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCatat < 1:898925/251‑1 (MQ=255) ttattaCGTCCATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc < 1:242452/251‑1 (MQ=255) ccattatACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTcc > 1:851380/3‑201 (MQ=255) ccattatACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:337712/3‑242 (MQ=255) ccattatACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGa > 1:93094/3‑251 (MQ=255) ccattatACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGa > 1:38019/3‑251 (MQ=255) ccattatACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGAATGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAgagg > 1:790231/3‑140 (MQ=255) cattatACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:19638/2‑241 (MQ=255) gTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGttt > 1:77657/1‑251 (MQ=255) tCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTa > 1:333187/1‑251 (MQ=255) tGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACt < 1:700889/251‑1 (MQ=255) gTATTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGaaacgtcatgaaa < 1:548186/149‑11 (MQ=255) aTTTTTGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCg > 1:506800/1‑251 (MQ=255) tttGATCTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTAc < 1:583874/233‑1 (MQ=255) cTTTTTGGATTGTGTTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAGATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAAt > 1:215371/1‑251 (MQ=255) gtgtTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAGCCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGcggaaata > 1:718824/1‑140 (MQ=255) gtgtTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTc > 1:372119/1‑159 (MQ=255) gtgtTTCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAAt > 1:85610/1‑228 (MQ=255) tttCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACcac > 1:713069/1‑195 (MQ=255) tCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGaaacgtcatgaaa < 1:63604/122‑11 (MQ=255) tCAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCa > 1:649806/1‑251 (MQ=255) cAATACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:694642/1‑189 (MQ=255) aaTACACACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTAt < 1:151228/97‑1 (MQ=255) atacacacCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGaaa > 1:804624/1‑109 (MQ=255) atacacacCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGa < 1:541859/127‑1 (MQ=255) atacacacCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc < 1:737307/187‑1 (MQ=255) cacacCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc < 1:269726/248‑1 (MQ=255) cGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGgtg < 1:337328/251‑1 (MQ=255) tAACGCAATAAAAATGAAATACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAAtg < 1:796132/251‑1 (MQ=255) aTACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACg > 1:428089/1‑158 (MQ=255) aTACTATGAAATGGTATGAAACGCCATGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc < 1:151823/219‑1 (MQ=255) ctatgaaatggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGccc < 1:256910/204‑1 (MQ=255) ctatgaaatggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGt > 1:123122/23‑251 (MQ=255) ctatgaaatggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGt > 1:496205/23‑251 (MQ=255) gaaatggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGgtg < 1:242988/199‑1 (MQ=255) aaatggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTa > 1:335040/18‑251 (MQ=255) tggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACgg < 1:268933/237‑1 (MQ=255) tggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACgg < 1:846966/237‑1 (MQ=255) tggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACgg < 1:869657/237‑1 (MQ=255) ggtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATAc > 1:717609/14‑140 (MQ=255) gtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGa < 1:80195/156‑1 (MQ=255) gtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcg > 1:274762/13‑251 (MQ=255) gtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcg > 1:88981/13‑251 (MQ=255) gtatgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcg > 1:898333/13‑251 (MQ=255) atgaaacgccatGAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGgcgcg > 1:720754/11‑251 (MQ=255) gAAATAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGc > 1:21730/1‑192 (MQ=255) aaaTAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAAcc < 1:860458/251‑1 (MQ=255) aaaTAACAAAACCCCGACATAGAGGGGCTTTATAACTATTTTGAAACGTCATGAAATGTTATGAAATGCGGAAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAAc < 1:619546/250‑1 (MQ=255) | GTTATTGTTCCCGAGGGTGTTACGGATACATAAAGCCCATCACGATCGGCTACTTTATAGAGTTTATCTTTTGGTTTTAGTGATTTGATTTTTGAATCGGTTAGCATTTTTATTACGTCTATTATACCGTCTGAAAAGTGTCGGTATTTTTGATCTTTTTGGATTGTGTTTCAATACATACCGTCAAAAATAACGCAATAAAAATGAAATACTATGAAATGAATTGAAATGATATGAAATAGCAAAACCCCGACATAGCGGGGCTTTATGGCTATTTTGAAATGATATGAAGTGTTATGAAATGCAGGAATATTATTCCCACTCAATCGTTGCTGGTGGTTTTCCGCTGATGTCATATACCACACGGGAAATGCCGTTTACTTCATTGATAATGCGATTGGAAATTCTGCCGAGCAAATCATAAGGCAGGTGTGCCCAATGTGCGGTCATAAAATCGATCGTTTCTACGGCGCGCAGGGAGATAACC > 1/1134787‑1135273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |