| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 147,971 | A→G | intergenic (‑12520/+65726) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 147,971 | 0 | A | G | 100.0% | 173.5 / NA | 61 | intergenic (‑12520/+65726) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (36/25); total (36/25) | |||||||||||
ATCCTACTATGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACACACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAATTGTTTACCATTACCAAATGG > 1/147729‑148208 | aTCCTACTATGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCaa > 1:672959/1‑251 (MQ=255)aTCCTACTATGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCaa > 1:876900/1‑251 (MQ=255) ccTACTATGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGt > 1:673042/1‑251 (MQ=255) ctactaTGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTg > 1:761683/1‑251 (MQ=255) ctactaTGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTg < 1:525701/251‑1 (MQ=255) gtgGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGc > 1:510099/1‑245 (MQ=255) gctACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTg > 1:573136/1‑227 (MQ=255) tACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTa < 1:247868/251‑1 (MQ=255) tACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTa > 1:882619/1‑251 (MQ=255) ccTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTaa > 1:204820/1‑250 (MQ=255) ccTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAc < 1:693794/251‑1 (MQ=255) ccTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATAATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTggg < 1:316894/225‑1 (MQ=255) aTTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAAt < 1:10801/251‑1 (MQ=255) ttACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAAtt < 1:767171/251‑1 (MQ=255) ttACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAAtt < 1:242472/251‑1 (MQ=255) aaaCTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTAccc < 1:565229/251‑1 (MQ=255) cTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAg > 1:306587/1‑162 (MQ=255) cTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTg > 1:118592/1‑164 (MQ=255) tATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAg > 1:416258/1‑161 (MQ=255) tAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAatata < 1:116677/251‑1 (MQ=255) tAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAatata < 1:785084/251‑1 (MQ=255) ttgtttgGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGa < 1:138357/251‑1 (MQ=255) gAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAAtt < 1:169876/200‑1 (MQ=255) tGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTTAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGa < 1:430259/250‑1 (MQ=255) ttCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAg < 1:527422/251‑1 (MQ=255) gTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTGCCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATAATCAGCAt < 1:829519/250‑1 (MQ=255) gTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTc > 1:87977/1‑205 (MQ=255) gTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAatata > 1:270193/1‑219 (MQ=255) tGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAAttt < 1:21579/251‑1 (MQ=255) cccATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAg > 1:147973/1‑234 (MQ=255) gATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAAt > 1:790618/1‑160 (MQ=255) gATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAg > 1:700932/1‑163 (MQ=255) gATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTAccc < 1:338189/184‑1 (MQ=255) aGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCAt > 1:96252/1‑229 (MQ=255) gTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAatata > 1:511813/1‑197 (MQ=255) gTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATgg < 1:791183/200‑1 (MQ=255) gTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGAc > 1:794106/1‑194 (MQ=255) ttctttTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATaa > 1:96077/1‑251 (MQ=255) tCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTc > 1:545098/1‑87 (MQ=255) tAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAGCTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCt < 1:870839/251‑1 (MQ=255) tatatTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTcc > 1:532771/1‑156 (MQ=255) atatTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAACTTTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATg > 1:61801/1‑171 (MQ=255) gttgtCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAAc > 1:486367/1‑135 (MQ=255) gCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTtat < 1:174430/222‑1 (MQ=255) gCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCaa > 1:381066/1‑251 (MQ=255) catcatATCATACCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAAt > 1:240962/1‑251 (MQ=255) atatcataCCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAg > 1:396992/1‑112 (MQ=255) atatcataCCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAat > 1:785146/1‑147 (MQ=255) ataCCAAATAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAAtt > 1:225653/1‑251 (MQ=255) aaaTAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGa > 1:846168/1‑153 (MQ=255) aaaTAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAAc > 1:44194/1‑210 (MQ=255) aaaTAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTa < 1:897968/222‑1 (MQ=255) aaaTAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAATTGTtta > 1:602987/1‑251 (MQ=255) aaaTAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAATTGTtta > 1:138556/1‑251 (MQ=255) aaaTAGTAGCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCAAAGATAGCAACATCATCAGCATCAAGCCAATTTCtt > 1:73004/1‑185 (MQ=255) tagtagCATCCAATTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAATTGTttacca < 1:794113/251‑1 (MQ=255) aTTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGAc < 1:810300/130‑1 (MQ=255) aTTCTGAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTcc > 1:205531/1‑202 (MQ=255) gAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAatata < 1:201006/120‑1 (MQ=255) gAAGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAATTGTTTACCATTACCAAAtgg < 1:859204/245‑1 (MQ=255) aGTACGCACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAatata > 1:706435/1‑118 (MQ=255) | ATCCTACTATGTGGATTACATATGGCTGCTACATACCTAAACATGTCATTCTGCCCCTTAGGAATTACTGGCGAGCCATGGGTAAGCAAACTATCAGAACAATCTAATTTGTTTGGAGTGGGAGTTGCTATTTTCGGTAGAAATACTGTCCCATGATAGTGCCTGAGTACTCTTTCTTTTTCTAAATATATTTGTTGTCAGCATCATATCATACCAAATAGTAGCATCCAATTCTGAAGTACACACCCCAAGTGCTTGGGCAAATTCTAAAAACTGCTCCTCTAAC‑TTTAAATAATTTTTTTCAACTGTTAAATTAGTATCAAAAAACTTCGCTACCCTTCCCGCTCTTAATATATGGACATCTAAGATAGCAACATCATCAGCATCAAGCCAATTTCTTGCTATCCAAGACGCCGTTTTATAACCAATTCCTTGTATTTGTAATAACCAATTTCTTAATTGTTTACCATTACCAAATGG > 1/147729‑148208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |