Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,099,031	T→C	intergenic (‑174314/‑16077)	unknown ← / → unknown	tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,099,031	0	T	C	100.0%	217.3 / NA	71	intergenic (‑174314/‑16077)	unknown/unknown	tRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/40);  total (31/40)

AAAAACACTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAATCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATC  >  1/1098798‑1099273                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                   aaaaaCACTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTgtgt                                                                                                                                                                                                                                   <  1:793216/251‑1 (MQ=255)   aaaCACTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTg                                                                                                                                                                                                                                 <  1:866010/251‑1 (MQ=255)      cacTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTgggg                                                                                                                                                                                                                              <  1:661531/251‑1 (MQ=255)      cacTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTgggg                                                                                                                                                                                                                              >  1:743295/1‑251 (MQ=255)        cTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGGGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATtg                                                                                                                                                                                                                                      >  1:450695/1‑241 (MQ=255)            tATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCGCGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGAt                                                                                                                                                                                                                        <  1:801272/251‑1 (MQ=255)            tATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGAt                                                                                                                                                                                                                        <  1:833764/251‑1 (MQ=255)             aTTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATa                                                                                                                                                                                                                       <  1:417873/251‑1 (MQ=255)                  tGACCGCACTTTCTTTAACGGCAGGCACGGTGGTTGCCGATAATCAGAAAGAAAACGTGAACATTTACACTTACGAATCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCCGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCCCGGTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCACAGCGGATATtgtg                                                                                                                                                                                                                                    >  1:900754/1‑233 (MQ=255)                      cGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCgtgt                                                                                                                                                                                                              <  1:305167/251‑1 (MQ=255)                      cGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCgtgt                                                                                                                                                                                                              <  1:596844/251‑1 (MQ=255)                        cACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTg                                                                                                                                                                                                            >  1:580508/1‑251 (MQ=255)                            ttctttAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGc                                                                                                                                                                                                                             <  1:359750/230‑1 (MQ=255)                            ttctttAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGAt                                                                                                                                                                                                                        <  1:35706/235‑1 (MQ=255)                              ctttAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGaa                                                                                                                                                                                                      >  1:809762/1‑251 (MQ=255)                                         ggcaCGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAg                                                                                                                                                                                           >  1:822212/1‑251 (MQ=255)                                         ggcaCGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAg                                                                                                                                                                                           >  1:137657/1‑251 (MQ=255)                                          gcaCGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAg                                                                                                                                                                                           >  1:650070/1‑250 (MQ=255)                                               gtgtTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGAt                                                                                                                                                                                                                        >  1:225601/1‑216 (MQ=255)                                               gtgtTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAAtt                                                                                                                                                                                     >  1:589744/1‑251 (MQ=255)                                                       cGATAATCAGAAGGAAAACGTAAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTAGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGAtg                                                                                                                                                                             <  1:99485/251‑1 (MQ=255)                                                            aTCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAAt                                                                                                                                                                        <  1:719132/251‑1 (MQ=255)                                                             tCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATa                                                                                                                                                                       <  1:66207/251‑1 (MQ=255)                                                                 aaGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGt                                                                                                                                                                   <  1:136921/251‑1 (MQ=255)                                                                   ggAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGAt                                                                                                                                                                                                                        <  1:67680/196‑1 (MQ=255)                                                                      aaaCGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGAtt                                                                                                                                                              <  1:882116/251‑1 (MQ=255)                                                                                     cacTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGc                                                                                                                                               <  1:61901/251‑1 (MQ=255)                                                                                       cTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCg                                                                                                                                                >  1:599739/1‑248 (MQ=255)                                                                                        atgttcacgttttccTTCCGATTGGGGCGCCGGTCCGAAATTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAAtt                                                                                                                                                                                     <  1:449060/196‑1 (MQ=255)                                                                                                      cTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGt                                                                                                                                                                   <  1:362333/214‑1 (MQ=255)                                                                                                            aTTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGacaac                                                                                                                        <  1:144540/251‑1 (MQ=255)                                                                                                                     ccGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGcttctt                                                                                                                <  1:796045/250‑1 (MQ=255)                                                                                                                        gTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGacaac                                                                                                                        <  1:658965/239‑1 (MQ=255)                                                                                                                                            tttGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGc                                                                                        <  1:638144/251‑1 (MQ=255)                                                                                                                                             ttGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCt                                                                                       <  1:539998/251‑1 (MQ=255)                                                                                                                                               gAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTCTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGacaa                                                                                                                         <  1:274942/215‑1 (MQ=255)                                                                                                                                                         ttCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGTACTTATGCTTTTGTGTATGAt                                                                           <  1:603468/251‑1 (MQ=255)                                                                                                                                                          tCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATa                                                                          <  1:708720/251‑1 (MQ=255)                                                                                                                                                           ccccGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATaa                                                                         <  1:53939/251‑1 (MQ=255)                                                                                                                                                             ccGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATaaaa                                                                       >  1:723866/1‑251 (MQ=255)                                                                                                                                                               gTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAAt                                                                     >  1:884937/1‑251 (MQ=255)                                                                                                                                                                ttGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAAt                                                                     <  1:5924/250‑1 (MQ=255)                                                                                                                                                                      ggtgAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTtgtg                                                                                 >  1:322327/1‑232 (MQ=255)                                                                                                                                                                       gtgAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGaa                                                             >  1:305962/1‑251 (MQ=255)                                                                                                                                                                           aTTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGt                                                                                                                                                                   >  1:653870/1‑145 (MQ=255)                                                                                                                                                                           aTTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATaa                                                                         >  1:500909/1‑235 (MQ=255)                                                                                                                                                                           aTTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAAt                                                                     >  1:836177/1‑239 (MQ=255)                                                                                                                                                                           aTTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACt                                                                >  1:38981/1‑244 (MQ=255)                                                                                                                                                                            ttATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTgggg                                                                                                                                                                                                                              >  1:819565/1‑85 (MQ=255)                                                                                                                                                                                  cagttttGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTAt                                                                              >  1:744749/4‑223 (MQ=255)                                                                                                                                                                                   ccTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTtg                                                                                   <  1:39997/217‑1 (MQ=255)                                                                                                                                                                                   ccTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGaa                                                 >  1:82764/1‑251 (MQ=255)                                                                                                                                                                                     ttttGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGc                                                                                                                                                                                                                             >  1:353886/1‑77 (MQ=255)                                                                                                                                                                                     ttttGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGAc                                                                                                      >  1:3513/1‑196 (MQ=255)                                                                                                                                                                                              tGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAg                                      <  1:232533/251‑1 (MQ=255)                                                                                                                                                                                                    cACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATtg                                 <  1:874538/250‑1 (MQ=255)                                                                                                                                                                                                        ttgttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCt                                                                                       <  1:231048/192‑1 (MQ=255)                                                                                                                                                                                                        ttgttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTtgtg                                                                                 <  1:204727/198‑1 (MQ=255)                                                                                                                                                                                                        ttgttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGa                            >  1:254237/1‑251 (MQ=255)                                                                                                                                                                                                          gttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGt                                                                                                                                                                   >  1:683661/1‑114 (MQ=255)                                                                                                                                                                                                          gttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGAtt                                                                                                                                                              <  1:303762/119‑1 (MQ=255)                                                                                                                                                                                                          gttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGaa                           >  1:453599/1‑250 (MQ=255)                                                                                                                                                                                                          gttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGaa                           >  1:92656/1‑250 (MQ=255)                                                                                                                                                                                                          gttTAATCGCGTACGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCG‑AAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACg                         >  1:240869/1‑251 (MQ=255)                                                                                                                                                                                                                      aCGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGctt                                                                                                                   <  1:891900/150‑1 (MQ=255)                                                                                                                                                                                                                       cGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTtg                                                                                   <  1:383882/181‑1 (MQ=255)                                                                                                                                                                                                                       cGTTTGGAAGGGCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTAcg             >  1:256632/1‑251 (MQ=255)                                                                                                                                                                                                                        gTTTGGAAGGGCATAAAACCAAAGCGGTTATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGcc                                                                                                             >  1:85277/1‑154 (MQ=255)                                                                                                                                                                                                                                  gCATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGAc                                                                                                      <  1:421711/151‑1 (MQ=255)                                                                                                                                                                                                                                   cATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATc  <  1:207479/250‑1 (MQ=255)                                                                                                                                                                                                                                   cATAAAACCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTGGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATc  <  1:38033/250‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                   AAAAACACTTTTATTTTTGACCGCACTTTCTTTAACGGCAGGCACGGTGTTTGCCGATAATCAGAAGGAAAACGTGAACATTTACACTTACGATTCCTTCACTTCCGATTGGGGCGCCGGTCCGAAACTTAAGCAGGCGTTTGAACAAAATTTTCCCCGTTGCGTGGTGAATTATATGCCTTTTGAAAGTGGCGGCACGTTGTTTAATCGCGTACGTTTGGAAGGGCATAAAATCAAAGCGGATATTGTGTTGGGGCTGGATAATTTCGTGTTGGATGAAGCGAAAAAAAGCAAATTGTTTGATGTGAATAAGGTGGATTTGAGCAAACTTTCGCTGCCGAGCCAGTGGGCGGACAACAGCTTCTTGCCTTACGACTTCGGCACTTATGCTTTTGTGTATGATAAAAATAAACTGAAAAATCCGCCGAAAAGCTTGAAAGAATTGGTGGAACGTGAAGATTTACGCGTGATTTATC  >  1/1098798‑1099273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑