Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,090,237 A→G intergenic (‑165520/‑24871) unknown ← / → unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,090,2370AG100.0% 221.7 / NA 73intergenic (‑165520/‑24871)unknown/unknowntRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (33/40);  total (33/40)

CTTTCGCTTTACGCGGGATTGCGTTGTAGTCGTCTTCGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTACAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCGGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAGGCGATAGCC  >  1/1089991‑1090481
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                    
cTTTCGCTTTACGCGGGATTGCGTTGTAGTCGTCTTCGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAAc                                                                                                                                                                                                                                                  <  1:896067/251‑1 (MQ=255)
      cTTTACGCGGGATTGCGTTGTAGTCGTCTTCGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTaaaaa                                                                                                                                                                                                                                            >  1:193296/1‑251 (MQ=255)
             cgGGATTGCGTTGTAGTCGTCTTCGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACtt                                                                                                                                                                                                                                     >  1:182412/1‑251 (MQ=255)
                   tGCGTTGTAGTCGTCTTCGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAac                                                                                                                                                                                                                               <  1:233889/251‑1 (MQ=255)
                                    cGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTAttc                                                                                                                                                                                                              <  1:157860/251‑1 (MQ=255)
                                              aCCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAac                                                                                                                                                                                                                               <  1:775699/224‑1 (MQ=255)
                                                  aaaTTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCa                                                                                                                                                                                                >  1:580568/1‑251 (MQ=255)
                                                           gtgtAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGAt                                                                                                                                                                                       >  1:187353/1‑251 (MQ=255)
                                                           gtgtAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGAt                                                                                                                                                                                       >  1:62979/1‑251 (MQ=255)
                                                            tgtAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGAt                                                                                                                                                                                       <  1:371373/250‑1 (MQ=255)
                                                                  cgcAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCTCTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGt                                                                                                                                                                                 <  1:410835/250‑1 (MQ=255)
                                                                     aaGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTg                                                                                                                                                                             <  1:567761/251‑1 (MQ=255)
                                                                        gAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            <  1:747886/249‑1 (MQ=255)
                                                                           tGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAAc                                                                                                                                                                       <  1:525381/251‑1 (MQ=255)
                                                                                  tttttGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTAt                                                                                                                                                                                                                <  1:862047/203‑1 (MQ=255)
                                                                                  tttttGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATc                                                                                                                                                                 >  1:296277/1‑250 (MQ=255)
                                                                                            aTCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGa                                                                                                                                                       >  1:899990/1‑250 (MQ=255)
                                                                                            aTCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGa                                                                                                                                                       >  1:703342/1‑250 (MQ=255)
                                                                                             tCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTCCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACa                                                                                                                                                     >  1:527353/1‑251 (MQ=255)
                                                                                                 aaGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            >  1:550152/1‑224 (MQ=255)
                                                                                                   gCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAAtttt                                                                                                                                               >  1:792138/1‑251 (MQ=255)
                                                                                                      aTGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGa                                                                                                                                                                     <  1:577920/226‑1 (MQ=255)
                                                                                                              cTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            <  1:663003/211‑1 (MQ=255)
                                                                                                                ggTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACaata                                                                                                                                  >  1:354473/1‑251 (MQ=255)
                                                                                                                  tATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACaataa                                                                                                                                 <  1:84875/250‑1 (MQ=255)
                                                                                                                  tATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACaataa                                                                                                                                 <  1:166240/250‑1 (MQ=255)
                                                                                                                   aTCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATg                                                                                                                               >  1:131579/1‑251 (MQ=255)
                                                                                                                    tCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATgc                                                                                                                              <  1:93161/251‑1 (MQ=255)
                                                                                                                      tAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATgcgc                                                                                                                            <  1:368949/251‑1 (MQ=255)
                                                                                                                             ccGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            >  1:261631/1‑196 (MQ=255)
                                                                                                                             ccGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGAt                                                                                                                     <  1:486576/251‑1 (MQ=255)
                                                                                                                              cGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATc                                                                                                                    <  1:132578/251‑1 (MQ=255)
                                                                                                                              cGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATc                                                                                                                    <  1:831535/251‑1 (MQ=255)
                                                                                                                                 aaaaGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCtt                                                                                                                  <  1:453027/250‑1 (MQ=255)
                                                                                                                                               aCTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATa                                                                                                    <  1:303133/250‑1 (MQ=255)
                                                                                                                                                        ccTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATa                                                                                                    >  1:218163/1‑241 (MQ=255)
                                                                                                                                                           ttCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGAt                                                                                       >  1:535935/1‑251 (MQ=255)
                                                                                                                                                             cGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            <  1:720817/164‑1 (MQ=255)
                                                                                                                                                                tAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTAc                                                                                   <  1:758043/250‑1 (MQ=255)
                                                                                                                                                                   gtgtTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATgcgc                                                                                                                            <  1:835919/206‑1 (MQ=255)
                                                                                                                                                                   gtgtTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATgcgc                                                                                                                            >  1:598686/1‑206 (MQ=255)
                                                                                                                                                                   gtgtTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACa                                                                                  >  1:700064/1‑248 (MQ=255)
                                                                                                                                                                   gtgtTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATgg                                                                               >  1:623125/1‑251 (MQ=255)
                                                                                                                                                                     gtTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGgtg                                                                             >  1:734191/1‑251 (MQ=255)
                                                                                                                                                                      ttGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGgtgt                                                                            <  1:659127/251‑1 (MQ=255)
                                                                                                                                                                           aaaTGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTc                                                                       <  1:840087/251‑1 (MQ=255)
                                                                                                                                                                             aTGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACAt                                                                                 >  1:714118/1‑239 (MQ=255)
                                                                                                                                                                                gTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTg                                                                                                                                              >  1:749009/1‑175 (MQ=255)
                                                                                                                                                                                       aCATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCg                                                           >  1:366387/1‑251 (MQ=255)
                                                                                                                                                                                        cATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATgcgc                                                                                                                            <  1:402015/185‑1 (MQ=255)
                                                                                                                                                                                           atTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACa                                                                                  >  1:583515/1‑224 (MQ=255)
                                                                                                                                                                                                ctttcCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGc                                                  <  1:404228/251‑1 (MQ=255)
                                                                                                                                                                                                ctttcCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGc                                                  <  1:360828/251‑1 (MQ=255)
                                                                                                                                                                                                    ccTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTcg                                              >  1:531845/1‑251 (MQ=255)
                                                                                                                                                                                                       tATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGc                                                                                              >  1:509915/1‑200 (MQ=255)
                                                                                                                                                                                                           tgttttgtGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTAttc                                                                                                                                                                                                              <  1:300760/84‑1 (MQ=255)
                                                                                                                                                                                                            gttttgtGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            >  1:176985/1‑117 (MQ=255)
                                                                                                                                                                                                            gttttgtGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            <  1:222177/117‑1 (MQ=255)
                                                                                                                                                                                                            gttttgtGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCgg                                                          >  1:593355/1‑231 (MQ=255)
                                                                                                                                                                                                                 gtgtTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGa                                                                                                                                                                            >  1:245758/1‑112 (MQ=255)
                                                                                                                                                                                                                 gtgtTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATa                                                                                                                                                                          >  1:652993/1‑114 (MQ=255)
                                                                                                                                                                                                                 gtgtTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCa                                 >  1:409644/1‑251 (MQ=255)
                                                                                                                                                                                                                       aTTTTGGGTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAg                                                    <  1:191867/226‑1 (MQ=255)
                                                                                                                                                                                                                             ggTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATc                                                                                                                                                                                      <  1:399319/90‑1 (MQ=255)
                                                                                                                                                                                                                             ggTTAAACGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCa                     >  1:555917/1‑251 (MQ=255)
                                                                                                                                                                                                                                  aaCGAGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGa                <  1:327617/251‑1 (MQ=255)
                                                                                                                                                                                                                                      aGTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATgcgc                                                                                                                            >  1:537117/1‑139 (MQ=255)
                                                                                                                                                                                                                                       gTTTTAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTAc                                                                                   <  1:521723/179‑1 (MQ=255)
                                                                                                                                                                                                                                        ttttAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAgg          <  1:795212/251‑1 (MQ=255)
                                                                                                                                                                                                                                        ttttAATAAAAAGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAg           <  1:333641/250‑1 (MQ=255)
                                                                                                                                                                                                                                               aaaaaGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAGGCGATAGc   <  1:582530/251‑1 (MQ=255)
                                                                                                                                                                                                                                               aaaaaGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAGGCGATAGc   <  1:630298/251‑1 (MQ=255)
                                                                                                                                                                                                                                                aaaaGTGCAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCAGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAGGCGATAGcc  <  1:864785/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                    
CTTTCGCTTTACGCGGGATTGCGTTGTAGTCGTCTTCGTCCGGTTGACCTAAATTGGCGGTGTAAGCGCAAGGAATGGCGCCTTTTTGACGCATCCAAAGCAATGCCGCGCTGGTATCTAAGCCACCGGAAAAGGCGATGCCGACTTTTTCACCTTTCGGTAAGTGTTGCAAAATGGTATTTGACATATTTTCTTTCCTTATTTGTTTTGTGTTTATTTTGGGTTAAACGAGTTTTAATAAAAAGTACAACTAAAAAATAACTTAAAAACCGACCGCACTTTTATTCTTCCGAAAACATCAGATTTGGATCGGGGTATTGATAAACGAAATCCAGTTCACGACAAATTTTGTTCGCCACAATAATGCGCTGTGGATCTTCCGGTGCGCTGATAAAGTGCGGTGGATTTACATGGTGTTTTTCCGCTGCCAAGCGGTAATAGGCTTCGCGGGGCGGATGCACGGGCGCTGCCAAATGATACAGGCGATAGCC  >  1/1089991‑1090481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑