Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,088,206	A→G	intergenic (‑163489/‑26902)	unknown ← / → unknown	tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,088,206	0	A	G	100.0%	163.0 / NA	54	intergenic (‑163489/‑26902)	unknown/unknown	tRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (29/25);  total (29/25)

TCACTGGCTAACCCTTGCTCACTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTAAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGCCGGTGGTTTTCAAACGCCATAGC  >  1/1087964‑1088450                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     tCACTGGCTAACCCTTGCTCACTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGAt                                                                                                                                                                                                                                                  >  1:884050/1‑247 (MQ=255)      ggCTAACCCTTGCTCACTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGAt                                                                                                                                                                                                                                                  <  1:721080/242‑1 (MQ=255)      ggCTAACCCTTGCTCACTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGAt                                                                                                                                                                                                                                                  <  1:716558/242‑1 (MQ=255)                 gCTCACTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTa                                                                                                                                                                                                                              >  1:308356/1‑251 (MQ=255)                     aCTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAaac                                                                                                                                                                                                                          <  1:780541/251‑1 (MQ=255)                                     tgTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACaaa                                                                                                                                                                                                          >  1:784141/1‑251 (MQ=255)                                      gTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATCAACCTAAttt                                                                                                                                                                                                                                       >  1:670426/1‑221 (MQ=255)                                        ttGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATg                                                                                                                                                                                                       <  1:57395/251‑1 (MQ=255)                                          ggCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTTCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGaa                                                                                                                                                                                                     >  1:752143/1‑251 (MQ=255)                                               aaaCAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAagag                                                                                                                                                                                                                  >  1:596236/1‑233 (MQ=255)                                                    ggATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAAt                                                                                                                                                                                                        <  1:232425/238‑1 (MQ=255)                                                                 cGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAagag                                                                                                                                                                                                                  >  1:770848/1‑215 (MQ=255)                                                                           gTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACata                                                                                                                                                                          <  1:386291/245‑1 (MQ=255)                                                                           gTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGa                                                                                                                                                                    >  1:54645/1‑251 (MQ=255)                                                                               tAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATAc                                                                                                                                                                 <  1:252690/250‑1 (MQ=255)                                                                                         ctgcCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATATCCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATc                                                                                                                                                                               <  1:378628/226‑1 (MQ=255)                                                                                               gTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAag                                                                                                                                                                                                                    <  1:778198/183‑1 (MQ=255)                                                                                                            cATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATc                                                                                                                                                                               >  1:779918/1‑207 (MQ=255)                                                                                                              tGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTgaga                                                                                                                                                                                                                                                   >  1:598527/1‑137 (MQ=255)                                                                                                              tGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTttat                                                                                                                                 >  1:208052/1‑251 (MQ=255)                                                                                                                               ttCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAgaga                                                                                                                <  1:511194/251‑1 (MQ=255)                                                                                                                               ttCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAgaga                                                                                                                <  1:83455/251‑1 (MQ=255)                                                                                                                                 cGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAAtt                                                                                                                                                                                            <  1:520241/173‑1 (MQ=255)                                                                                                                                 cGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACat                                                                                                                                                                           >  1:52485/1‑190 (MQ=255)                                                                                                                                  gCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTaa                                                                                                                                                        >  1:838154/1‑208 (MQ=255)                                                                                                                                   cTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAg                                                                                                            <  1:196165/251‑1 (MQ=255)                                                                                                                                     ataGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATc                                                                                                                                                                               >  1:781915/1‑182 (MQ=255)                                                                                                                                      taGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCAt                                                                                                         <  1:569620/251‑1 (MQ=255)                                                                                                                                              cTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGgtcg                                                                                                  <  1:402239/250‑1 (MQ=255)                                                                                                                                                gCCTACGGCATTCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGgtcgtc                                                                                                >  1:846132/1‑250 (MQ=255)                                                                                                                                                gCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATAc                                                                                                                                                                 >  1:643889/1‑185 (MQ=255)                                                                                                                                                gCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGgtcgtc                                                                                                >  1:739498/1‑250 (MQ=255)                                                                                                                                                gCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGgtcgtc                                                                                                >  1:320904/1‑250 (MQ=255)                                                                                                                                                                       gcgcTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATg                                                                                                                                                      >  1:117159/1‑173 (MQ=255)                                                                                                                                                                            aGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGat                                                                                                                                              <  1:769040/176‑1 (MQ=255)                                                                                                                                                                              gCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGAcc                                                                                                                                                                                     >  1:68259/1‑135 (MQ=255)                                                                                                                                                                                    gAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAg                                                                                                                                                                                                    <  1:446009/114‑1 (MQ=255)                                                                                                                                                                                    gAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCt                                                                                                                                                          >  1:726718/1‑156 (MQ=255)                                                                                                                                                                                    gAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATg                                                                                                                                                      <  1:143547/160‑1 (MQ=255)                                                                                                                                                                                    gAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATg                                                                                                                                                      >  1:434655/1‑160 (MQ=255)                                                                                                                                                                                    gAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGt                                                                                                                                                     >  1:435023/1‑161 (MQ=255)                                                                                                                                                                                          gCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATAc                                                                                                                                                                 <  1:874361/143‑1 (MQ=255)                                                                                                                                                                                           cATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGa                                                      <  1:516324/249‑1 (MQ=255)                                                                                                                                                                                                 gttgtGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGAc                                                                                                                                                                                      <  1:441860/115‑1 (MQ=255)                                                                                                                                                                                                    gtgAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACat                                                                                                                                                                           >  1:48469/1‑123 (MQ=255)                                                                                                                                                                                                           tcttcATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACata                                                                                                                                                                          <  1:726149/117‑1 (MQ=255)                                                                                                                                                                                                                     ttCTCCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTg                          >  1:515493/1‑251 (MQ=255)                                                                                                                                                                                                                       ctcCTGTTGTGTGTGAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGc                         >  1:796590/1‑250 (MQ=255)                                                                                                                                                                                                                                 gtgtgAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATAc                                                                                                                                                                 <  1:385587/104‑1 (MQ=255)                                                                                                                                                                                                                                   gtgAAATAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATAc                                                                                                                                                                 <  1:287039/102‑1 (MQ=255)                                                                                                                                                                                                                                       aaTAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGCCGGTGGTTTTCAAACg         >  1:897862/1‑250 (MQ=255)                                                                                                                                                                                                                                         tAACCGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGCCGGTGGTTTTCAAACGCCa      >  1:337586/1‑251 (MQ=255)                                                                                                                                                                                                                                             cGCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCCACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGCCGGTGGTTTTCAAACGCCATAGc  <  1:211428/251‑1 (MQ=255)                                                                                                                                                                                                                                              gCTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGCCGGTGGTTTTCAAACGCCATAg   >  1:365040/1‑249 (MQ=255)                                                                                                                                                                                                                                               cTTTGAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATg                                      >  1:718495/1‑213 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     TCACTGGCTAACCCTTGCTCACTGGCGACCATGCCATGTTTGGCGTAAACAGGATGAAATATGTCGTTAGCGCTGTCGTAACGGGCTGCTGCCAGTTCCGTTGCGGTCATGGCAGGGGCTTGCGGATTCGCTATAGCCGAGCTGCCTACGGCAATCGCAATAGAAAGCGCTAGGCTACTGAGTAAGCATTTTGTTGTGAATTTCTTCATATTTTCTCCTGTTGTGTGTGAAATAACCGCTTTAAGATTAACCTAATTTTGCTGATTAAAACAACAAGAGATCACAAAATGAAGGGTAAATTTGTGACCTAGATCACATATTTTGATACTTTTTCTAATGTTTGAGATAAATAAATTTTATTAGTGATAAGTTAGAGAAAAGCATGCGGTCGTCCGTGATATAAAAACACATAAAAAACCGACCGCACTTTTGCGAAGAGATTTATTCGATGCGGGTGATTTTGCCGGTGGTTTTCAAACGCCATAGC  >  1/1087964‑1088450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑