| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 142,714 | C→T | intergenic (‑7263/+70983) | unknown ← / ← unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 142,714 | 0 | C | T | 100.0% | 181.2 / NA | 63 | intergenic (‑7263/+70983) | unknown/unknown | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/tRNA‑Arg‑ACG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (31/32); total (31/32) | |||||||||||
CATTCTGGCGGCAAAACAGGCGAAACGAAAATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGCGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACTAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGTCGCCTTATAACCC > 1/142471‑142949 | cATTCTGGCGGCAAAACAGGCGAAACGAAAATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCa < 1:173619/251‑1 (MQ=255) tGGCGGCAAAACAGGCGAAACGAAAATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATc < 1:132167/251‑1 (MQ=255) gcggcAAAACAGGCGAAACGAAAATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCg > 1:597345/1‑250 (MQ=255) cggcAAAACAGGCGAAACGAAAATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCa > 1:510451/1‑251 (MQ=255) cgaaaATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGctc < 1:503205/223‑1 (MQ=255) cATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTAt < 1:357095/251‑1 (MQ=255) gcgcAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAgcc < 1:166218/222‑1 (MQ=255) aGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCg > 1:334787/1‑250 (MQ=255) gggAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGc > 1:507494/1‑250 (MQ=255) aTGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGtt > 1:308963/1‑232 (MQ=255) tGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGcg > 1:736346/1‑250 (MQ=255) gCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCa > 1:392835/1‑250 (MQ=255) aaTGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCgg > 1:153461/1‑251 (MQ=255) tGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGa < 1:225165/251‑1 (MQ=255) cTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGTAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTtct < 1:437417/226‑1 (MQ=255) tCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAAc < 1:307931/234‑1 (MQ=255) ggAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTaa > 1:570358/1‑251 (MQ=255) aaaCTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAAc < 1:543940/250‑1 (MQ=255) aCTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCgg > 1:263609/1‑251 (MQ=255) tattaCGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCAc < 1:107375/215‑1 (MQ=255) cGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTAc < 1:677669/251‑1 (MQ=255) cGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTAc < 1:98939/251‑1 (MQ=255) aTTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGc < 1:131978/219‑1 (MQ=255) tCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAAt > 1:674105/1‑251 (MQ=255) ttATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGAc < 1:325257/251‑1 (MQ=255) aTTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTAt < 1:613379/179‑1 (MQ=255) gtagtGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGa > 1:234381/1‑251 (MQ=255) ttCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGaa < 1:420133/251‑1 (MQ=255) tctcAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAACATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACAGGAAATGACCGACCAGGAAGCCATTGaaa > 1:300215/1‑251 (MQ=255) ggACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAg > 1:764884/1‑251 (MQ=255) gACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAg < 1:250724/250‑1 (MQ=255) aCGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGc < 1:483579/250‑1 (MQ=255) aaTTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATAGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCAc > 1:844549/1‑163 (MQ=255) ccGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAATAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAAc < 1:519935/251‑1 (MQ=255) ggTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCa < 1:593495/160‑1 (MQ=255) tACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGAc < 1:151672/193‑1 (MQ=255) gacaacaAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAAc > 1:295357/2‑148 (MQ=255) acaacaAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTAc > 1:834535/1‑233 (MQ=255) acaaAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATa > 1:879679/1‑251 (MQ=255) aaGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACt < 1:748215/251‑1 (MQ=255) gATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCa > 1:292844/1‑236 (MQ=255) aTGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATaa > 1:339274/1‑251 (MQ=255) aaaaTCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTg < 1:343694/251‑1 (MQ=255) tCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCaa > 1:509281/1‑251 (MQ=255) cACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGaa < 1:767968/163‑1 (MQ=255) cACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAaata < 1:258693/251‑1 (MQ=255) cACCGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGGCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAaata < 1:446605/251‑1 (MQ=255) ccGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAaataat > 1:249772/1‑251 (MQ=255) cGATATTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTAc > 1:71620/1‑131 (MQ=255) atatTATCGGTCAACAACACGCCAAACGTGCTCTCATTATCCCCGCCGCCGGCCACCACAATCTGTTCTTTCTCGGTCCTCCCGTCACCGGGACAACCATGCTTGCCTCCCCCTGAACCGGATTATTCCCGTAAATGACCGAGCACTCAGCCATTGAAACCTCGTCCGTACCCATTTAGGTACCACACTAACTGAATGTCCATAACTGGTGGTAAAATTGCAAATGACTTTCATACGATGCAAATAATTGt > 1:518271/1‑251 (MQ=255) atatTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAaata > 1:575320/1‑246 (MQ=255) atatTATCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTg < 1:415016/250‑1 (MQ=255) tattatCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGt > 1:74948/1‑250 (MQ=255) tattatCGGTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGAACAGGAAGCCATTGAAACCGCGTCCTTAGCAATTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTaaaa < 1:581270/216‑1 (MQ=255) ggTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGTCGCCTtat > 1:321165/1‑251 (MQ=255) gTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAAc < 1:319035/179‑1 (MQ=255) gTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAAc > 1:78195/1‑219 (MQ=255) gTCAACAACACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGTCGCCTtata > 1:782112/1‑251 (MQ=255) aacaacACGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGCACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGTCGCCTTATAAcc < 1:309830/251‑1 (MQ=255) acaacaCGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGTCGCCTTATAAccc < 1:687227/251‑1 (MQ=255) caacaCGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTAc > 1:848271/1‑115 (MQ=255) cGCCAAACGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAAc > 1:593567/1‑141 (MQ=255) aaCGTGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACCAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAaata < 1:635910/222‑1 (MQ=255) | CATTCTGGCGGCAAAACAGGCGAAACGAAAATGCATTGTCGCGCAAGGGAATGCTAATGAAGCTTCACTGGTTTCCGATCAGGAAACTTATTACGCCTATTCTTTATTGGAAGTAGTGCAATTTCTCAATAATCAGGACGAATTACCGCTTGCCGGTGAAATACCACAACAAAGTGCGGTGGATTTTTGCCATGAAAATCCGAAAGATCTCACCGATATTATCGGTCAACAACACGCCAAACGCGCTCTCATGATCGCAGCCGCCGGGCAACACAATCTGTTATTTCTCGGTCCGCCCGGCACCGGGAAAACCATGCTTGCCAGCCGTTTAACCGGATTATTACCGGAAATGACCGACTAGGAAGCCATTGAAACCGCGTCCGTAGCAAGTTTGGTACAAAACGAACTGAATTTTCATAACTGGTGTTAAAATTACAAATAACTGTCAAACGATACAAATAATTGTCGCCTTATAACCC > 1/142471‑142949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |