Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,004,318 C→T intergenic (‑79601/‑110790) unknown ← / → unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,004,3180CT100.0% 239.9 / NA 84intergenic (‑79601/‑110790)unknown/unknowntRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (39/45);  total (39/45)

AATTTATGGGGCGGATTGAGTATAGTAAAAATTTTCATTCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAACTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATGGTGCGGCG  >  1/1004075‑1004559
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                 
aaTTTATGGGGCGGATTGAGTATAGTAAAAATTTTCATTCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGt                                                                                                                                                                                                                                            >  1:408724/1‑251 (MQ=255)
aaTTTATGGGGCGGATTGAGTACAGTAAAAATTTTCATTCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGt                                                                                                                                                                                                                                            >  1:673602/1‑251 (MQ=255)
              aTTGAGTATAGTAAAAATTTTCATTCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTa                                                                                                                                                                                                                               >  1:362108/1‑250 (MQ=255)
                  aGTATAGTAAAAATTTTCATTCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGt                                                                                                                                                                                                                           <  1:197464/250‑1 (MQ=255)
                                     ttCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGGTGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGat                                                                                                                                                                                                       <  1:217564/251‑1 (MQ=255)
                                     ttCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGat                                                                                                                                                                                                       <  1:170095/251‑1 (MQ=255)
                                       ccGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGatat                                                                                                                                                                                                     <  1:788106/251‑1 (MQ=255)
                                            gTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCg                                                                                                                                                                                                >  1:447674/1‑251 (MQ=255)
                                             tAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCg                                                                                                                                                                                                <  1:217009/250‑1 (MQ=255)
                                                    ttCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGaaa                                                                                                                                                                                        <  1:207383/251‑1 (MQ=255)
                                                      ccGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATg                                                                                                                                                                                      >  1:335385/1‑251 (MQ=255)
                                                       cGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATGGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATgg                                                                                                                                                                                     <  1:391456/251‑1 (MQ=255)
                                                       cGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATcc                                                                                                                                                                                                            >  1:653276/1‑228 (MQ=255)
                                                         ccATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGgtg                                                                                                                                                                                   <  1:525135/251‑1 (MQ=255)
                                                              aCATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTAc                                                                                                                                                                                                                              <  1:756316/203‑1 (MQ=255)
                                                              aCATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACg                                                                                                                                                                              >  1:282327/1‑251 (MQ=255)
                                                              aCATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACg                                                                                                                                                                              >  1:107017/1‑251 (MQ=255)
                                                                        aTTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGAtattat                                                                                                                                                                                                  <  1:607265/221‑1 (MQ=255)
                                                                           aCTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTgga                                                                                                                                                                 >  1:793711/1‑251 (MQ=255)
                                                                            cTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGAtattat                                                                                                                                                                                                  <  1:65424/217‑1 (MQ=255)
                                                                                   gATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTgg                                                                                                                                                                  <  1:109971/242‑1 (MQ=255)
                                                                                     tttAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGgtg                                                                                                                                                                                   <  1:779517/223‑1 (MQ=255)
                                                                                     tttAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGAt                                                                                                                                                       >  1:276663/1‑251 (MQ=255)
                                                                                          acacATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTCTTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAAtt                                                                                                                                                  >  1:448967/1‑251 (MQ=255)
                                                                                           cacaTTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGAt                                                                                                                                                       >  1:848485/1‑245 (MQ=255)
                                                                                             caTTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAAt                                                                                                                                                                                       <  1:869446/211‑1 (MQ=255)
                                                                                             caTTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCg                                                                                                                                               >  1:795559/1‑251 (MQ=255)
                                                                                             caTTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCg                                                                                                                                               >  1:701730/1‑251 (MQ=255)
                                                                                             caTTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCg                                                                                                                                               >  1:370500/1‑251 (MQ=255)
                                                                                               ttACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGAt                                                                                                                                                       >  1:649975/1‑241 (MQ=255)
                                                                                               ttACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAAtt                                                                                                                                                  >  1:284891/1‑246 (MQ=255)
                                                                                                  cacaTCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACg                                                                                                                                                                                                                     <  1:206767/176‑1 (MQ=255)
                                                                                                  cacaTCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATcc                                                                                                                                                                                                            <  1:772379/185‑1 (MQ=255)
                                                                                                    caTCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGc                                                                                                                                                                                             >  1:149193/1‑198 (MQ=255)
                                                                                                    caTCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCg                                                                                                                                        >  1:499145/1‑251 (MQ=255)
                                                                                                         acacCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGAt                                                                                                                                   <  1:50174/251‑1 (MQ=255)
                                                                                                          cacCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGAtt                                                                                                                                  >  1:800883/1‑251 (MQ=255)
                                                                                                            ccGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGAtttt                                                                                                                                >  1:570827/1‑251 (MQ=255)
                                                                                                                    cGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATg                                                                                                                        <  1:653753/251‑1 (MQ=255)
                                                                                                                         aTTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTAc                                                                                                                                                                                                                              >  1:578799/1‑144 (MQ=255)
                                                                                                                         aTTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGc                                                                                                                                                                            <  1:708585/194‑1 (MQ=255)
                                                                                                                         aTTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTAt                                                                                                                   >  1:367013/1‑251 (MQ=255)
                                                                                                                         aTTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTAt                                                                                                                   >  1:64206/1‑251 (MQ=255)
                                                                                                                         aTTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATCTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTc                                                                                                                                                 <  1:439822/221‑1 (MQ=255)
                                                                                                                            ttATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTc                                                                                                                                                 >  1:803397/1‑218 (MQ=255)
                                                                                                                                 ccccATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACgaga                                                                                                                                                                                                                  <  1:827900/148‑1 (MQ=255)
                                                                                                                                     aTGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACgg                                                                                                       <  1:781436/251‑1 (MQ=255)
                                                                                                                                        ccAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAat                                                                                                                                                                                                                >  1:237967/1‑143 (MQ=255)
                                                                                                                                        ccAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCg                                                                                                                                                                                                <  1:523001/159‑1 (MQ=255)
                                                                                                                                        ccAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGa                                                                                                     <  1:258687/250‑1 (MQ=255)
                                                                                                                                        ccAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGa                                                                                                     <  1:733319/250‑1 (MQ=255)
                                                                                                                                               ccAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCg                                                                                                                                                                                                <  1:804426/152‑1 (MQ=255)
                                                                                                                                                  aaGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTAtt                                                                                          >  1:416412/1‑251 (MQ=255)
                                                                                                                                                     tGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGc                                                                                       <  1:391891/251‑1 (MQ=255)
                                                                                                                                                       cGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCa                                                                                      <  1:58212/250‑1 (MQ=255)
                                                                                                                                                               aaTCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTc                                                                             <  1:331031/251‑1 (MQ=255)
                                                                                                                                                                aTCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAAc                                                                                                                                                            >  1:89491/1‑171 (MQ=255)
                                                                                                                                                                           ttttACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGaa                                                                 >  1:215840/1‑251 (MQ=255)
                                                                                                                                                                                     attTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACg                                                                                                        <  1:284345/202‑1 (MQ=255)
                                                                                                                                                                                     attTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCa                                                                                      <  1:856415/220‑1 (MQ=255)
                                                                                                                                                                                     attTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGggagg                                                       >  1:749985/1‑251 (MQ=255)
                                                                                                                                                                                        ttATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGAtt                                                    >  1:106864/1‑251 (MQ=255)
                                                                                                                                                                                          aTGGTGTTGAGCGAGCAATTCGTGGGTTATAGCCTAATCAGCCATTGCACCTCTGAATTTGATGTAACAAATTATTTACAGTTAGACGAGAATATcc                                                                                                                                                                                                            <  1:307474/97‑1 (MQ=255)
                                                                                                                                                                                               gtTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCTCCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACgg                                                                                                       <  1:530088/193‑1 (MQ=255)
                                                                                                                                                                                               gtTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGggag                                                        <  1:130989/240‑1 (MQ=255)
                                                                                                                                                                                                       ggCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGc                                                                                       <  1:32519/201‑1 (MQ=255)
                                                                                                                                                                                                       ggCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGaaaa                                     >  1:322421/1‑251 (MQ=255)
                                                                                                                                                                                                         cAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAAtc                                   <  1:137009/251‑1 (MQ=255)
                                                                                                                                                                                                            ttCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAAc                                                                <  1:772307/219‑1 (MQ=255)
                                                                                                                                                                                                                tGGGTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCggagg                            <  1:556292/251‑1 (MQ=255)
                                                                                                                                                                                                                  ggTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAg                                                >  1:369034/1‑229 (MQ=255)
                                                                                                                                                                                                                   gTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTAttt                                                                                                                                                                                                                                <  1:534546/52‑1 (MQ=255)
                                                                                                                                                                                                                   gTTATAGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGaaa                                                                                                                                                                                        <  1:215270/92‑1 (MQ=255)
                                                                                                                                                                                                                        aGCCAAATCAGCCATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCa                                                                                               >  1:246775/1‑176 (MQ=255)
                                                                                                                                                                                                                                   ccATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCg                                                                                                                                                                                                <  1:188609/68‑1 (MQ=255)
                                                                                                                                                                                                                                   ccATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGAt           <  1:162634/249‑1 (MQ=255)
                                                                                                                                                                                                                                   ccATTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATgg         >  1:869888/1‑251 (MQ=255)
                                                                                                                                                                                                                                     aTTGCACCTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATGGTg       <  1:404119/251‑1 (MQ=255)
                                                                                                                                                                                                                                           ccTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGgga                                                         <  1:714740/195‑1 (MQ=255)
                                                                                                                                                                                                                                           ccTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGaaa                                      >  1:771454/1‑214 (MQ=255)
                                                                                                                                                                                                                                           ccTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATGGTgcggcg  >  1:366190/1‑250 (MQ=255)
                                                                                                                                                                                                                                           ccTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATGGTgcggcg  >  1:397161/1‑250 (MQ=255)
                                                                                                                                                                                                                                           ccTCTGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATGGTgcggcg  >  1:574088/1‑250 (MQ=255)
                                                                                                                                                                                                                                            ctctGAATTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGAt                                                                                  <  1:15438/169‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                 
AATTTATGGGGCGGATTGAGTATAGTAAAAATTTTCATTCCGCTGTAAGGGGTTCCGCCATGACATTACTCAATTACTTTCAGGATTTAGACACATTACACATCAACACCGCAACACGCCTATTTTATTCCCCATGCCAATGACCAAAGTGCGGTGGAAAATCCAAGAGAATTTTACGATTATTTTATGGTGTTGAACGGGCAATTCGTGGGTTATAGCCAAATCAGCCATTGCACCTCTGAACTTGATGTAACGAATTATTTACAGTTAGACGAGAATATCCTCGATATTATCGTGCTGAAATGGTGTGACGGCAGTTATTTGGAGGAACAGGATAAATTCCGTATGTCGGGGATTTTTCGTGATGTTTATCTGCTGTAACGGGATGCGCAGTATTTGCAGGATTTTTCATTAAAACGGAACCGTGGGAGGATTTCAGTGAAGCGAAAATCTCGGAGGAATGTAGCTTTTCCGATGGTGCGGCG  >  1/1004075‑1004559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑