Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 996,301 T→C intergenic (‑71584/‑118807) unknown ← / → unknown tRNA‑Gly‑GCC/tRNA‑Met‑CAT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1996,3010TC100.0% 211.0 / NA 71intergenic (‑71584/‑118807)unknown/unknowntRNA‑Gly‑GCC/tRNA‑Met‑CAT
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (40/31);  total (40/31)

GTCCAGTTGCCGTAAATTTCGATTTGGATTTCTTTTTTCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTTTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTACGG  >  1/996055‑996539
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                              
gTCCAGTTGCCGTAAATTTCGATTTGGATTTCTTTTTTCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCAt                                                                                                                                                                                                                                            >  1:688684/1‑251 (MQ=255)
      ttGCCGTAAATTTCGATTTGGATTTCTTTTTTCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCt                                                                                                                                                                                                                                        <  1:191511/249‑1 (MQ=255)
                       ttGGATTTCTTTTTTCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCt                                                                                                                                                                                                                                        <  1:712347/232‑1 (MQ=255)
                         ggATTTCTTTTTTCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTg                                                                                                                                                                                                                   >  1:15312/1‑251 (MQ=255)
                                 tttttCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGGGCCCACtt                                                                                                                                                                                                            >  1:291482/1‑250 (MQ=255)
                                        cTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAAtt                                                                                                                                                                                                    >  1:103341/1‑251 (MQ=255)
                                                tCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTaa                                                                                                                                                                                            >  1:231521/1‑251 (MQ=255)
                                                tCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTaa                                                                                                                                                                                            >  1:279606/1‑251 (MQ=255)
                                                        ctctGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTc                                                                                                                                                                                                  <  1:89230/237‑1 (MQ=255)
                                                                         cgGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTATAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGac                                                                                                                                                                   <  1:22760/251‑1 (MQ=255)
                                                                               cTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACgg                                                                                                                                                               >  1:451099/1‑249 (MQ=255)
                                                                               cTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACgg                                                                                                                                                               >  1:841067/1‑249 (MQ=255)
                                                                                         tgctgcTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGc                                                                                                                                                   <  1:831475/251‑1 (MQ=255)
                                                                                           ctgctTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCaataa                                                                                                                                                                                                      <  1:769644/198‑1 (MQ=255)
                                                                                             gctTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCaataa                                                                                                                                                                                                      >  1:742026/1‑196 (MQ=255)
                                                                                                      gCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTa                                                                                                                                       <  1:724618/250‑1 (MQ=255)
                                                                                                         gggTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAAt                                                                                                                                                                                          >  1:464577/1‑196 (MQ=255)
                                                                                                          ggTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGc                                                                                                                                   <  1:483865/250‑1 (MQ=255)
                                                                                                                         agaCGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATgg                                                                                                                    <  1:602019/250‑1 (MQ=255)
                                                                                                                            cGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGtt                                                                                                                  <  1:841721/249‑1 (MQ=255)
                                                                                                                            cGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTg                                                                                                                >  1:528214/1‑251 (MQ=255)
                                                                                                                            cGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTg                                                                                                                >  1:822071/1‑251 (MQ=255)
                                                                                                                              gTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGtt                                                                                                              >  1:298756/1‑251 (MQ=255)
                                                                                                                               tGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTc                                                                                                             <  1:234686/251‑1 (MQ=255)
                                                                                                                                gAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACCATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGc                                                                                                                                   >  1:392917/1‑228 (MQ=255)
                                                                                                                                     aGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCaataa                                                                                                                                                                                                      >  1:473406/1‑156 (MQ=255)
                                                                                                                                        cGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGtt                                                                                                    <  1:771565/251‑1 (MQ=255)
                                                                                                                                               ggCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCct                                                                                               >  1:737700/1‑249 (MQ=255)
                                                                                                                                                  ttCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTc                                                                                          <  1:289301/251‑1 (MQ=255)
                                                                                                                                                          ccATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTttc                                                                                   <  1:127157/250‑1 (MQ=255)
                                                                                                                                                                 ggCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAg                                                                                                                          <  1:48098/204‑1 (MQ=255)
                                                                                                                                                                 ggCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGtt                                                                                                                  >  1:105637/1‑212 (MQ=255)
                                                                                                                                                                   cTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATaaa                                                                          <  1:10559/250‑1 (MQ=255)
                                                                                                                                                                           gcgcCGCCGTCGGTGGTTTTTAAATCGCATACGATAATATGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGtt                                                                 >  1:217587/1‑251 (MQ=255)
                                                                                                                                                                                         ggtTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTc                                                                                                                                                                                                           >  1:623032/1‑99 (MQ=255)
                                                                                                                                                                                                 aaTCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAAc                                           <  1:795549/251‑1 (MQ=255)
                                                                                                                                                                                                 aaTCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAAc                                           <  1:868999/251‑1 (MQ=255)
                                                                                                                                                                                                   tCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCg                                         >  1:802587/1‑251 (MQ=255)
                                                                                                                                                                                                     gCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATgg                                                                                                                    >  1:875104/1‑174 (MQ=255)
                                                                                                                                                                                                     gCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAAc                                           >  1:479768/1‑247 (MQ=255)
                                                                                                                                                                                                       aTACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCa                                     >  1:741365/1‑251 (MQ=255)
                                                                                                                                                                                                         aCGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCAtt                                   >  1:708645/1‑251 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCaataa                                                                                                                                                                                                      <  1:832453/87‑1 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGttt                                                                                                   >  1:71200/1‑186 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAAc                                           >  1:241860/1‑242 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCAttt                                  >  1:596228/1‑251 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCAttt                                  >  1:583368/1‑251 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCAttt                                  >  1:579224/1‑251 (MQ=255)
                                                                                                                                                                                                          cGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCAttt                                  >  1:534124/1‑251 (MQ=255)
                                                                                                                                                                                                            aTAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTgg                                >  1:587074/1‑251 (MQ=255)
                                                                                                                                                                                                            aTAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTgg                                >  1:381270/1‑251 (MQ=255)
                                                                                                                                                                                                                    aTTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGc                         <  1:401720/250‑1 (MQ=255)
                                                                                                                                                                                                                       cGGGTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTgg                                                         <  1:818796/215‑1 (MQ=255)
                                                                                                                                                                                                                         ggTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAg                   >  1:613892/1‑251 (MQ=255)
                                                                                                                                                                                                                          gTGAAGGGCGCGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAg                   <  1:873878/250‑1 (MQ=255)
                                                                                                                                                                                                                                ggCGCGTAGGGTGGACTCCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGc             <  1:338294/250‑1 (MQ=255)
                                                                                                                                                                                                                                 gcgcGTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTcc                                                                                                                                                                                                 <  1:285486/69‑1 (MQ=255)
                                                                                                                                                                                                                                  cgcgTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAgtgt                <  1:275641/245‑1 (MQ=255)
                                                                                                                                                                                                                                  cgcgTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCAt           <  1:506993/250‑1 (MQ=255)
                                                                                                                                                                                                                                   gcgTAGGGTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTa                                                                                                                                                      <  1:181022/110‑1 (MQ=255)
                                                                                                                                                                                                                                        gggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGc                                                                                                                                                   >  1:801925/1‑108 (MQ=255)
                                                                                                                                                                                                                                        gggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGc                                                                                                                                   <  1:529113/124‑1 (MQ=255)
                                                                                                                                                                                                                                        gggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAg                   >  1:166038/1‑236 (MQ=255)
                                                                                                                                                                                                                                        gggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTa     >  1:817353/1‑250 (MQ=255)
                                                                                                                                                                                                                                        gggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTa     >  1:762560/1‑250 (MQ=255)
                                                                                                                                                                                                                                         ggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTttc                                                                                   <  1:702472/171‑1 (MQ=255)
                                                                                                                                                                                                                                         ggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTACg   >  1:262823/1‑251 (MQ=255)
                                                                                                                                                                                                                                         ggTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTACg   >  1:653912/1‑251 (MQ=255)
                                                                                                                                                                                                                                          gTGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTACgg  >  1:444587/1‑251 (MQ=255)
                                                                                                                                                                                                                                           tGGACACCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTACgg  <  1:591083/250‑1 (MQ=255)
                                                                                                                                                                                                                                              acacCGCTCTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGtt                                                                                                                  <  1:877568/135‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                              
GTCCAGTTGCCGTAAATTTCGATTTGGATTTCTTTTTTCACTTTGAGATCCGGGTGCTCTGCGTTGAATTCGTCGGCAACTTTTTTGCATGCTGCTTTGGTGGCCGGGTGGGCGGCGGCGGAGACGGTGAGCCAGTCGGCACCGGCTTCAAATGCCATTTTGGCTAAAATGGCGCCGCCGTCGGTGGTTTTTAAATCGCATACGATAATGTGATTCGGGTGAAGGGCGCGTAGGGTGGACACCGCTTTCATGCCTTCGGCGCAGGCAAGAATGGTGCCCACTTCAATAATTTCCACTAAATTTTCCGCTTGTTTGGCGTCGGACACGGCTTTTTCTAAGCTCAGTGAATCTAAGGCGATTTGAAGTAATGGTTTGTTCATTTTTGTTTTCCTCTGTCAATTTTCATTCATAAAAGTGCGGTTGATTTTGGCGACGTTTTTCAACCGTGCATTTGGATTAAGCATTCAGTGTGGCATCAATTACGG  >  1/996055‑996539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑